FC870813

Overview
NameFC870813
Unique NameFC870813
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length798
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24
Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 1
Query:  295 LLAGGVAGALSKTCTAPLARLTILFQVQGMH--SDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXGLGAT 795
            LL+GGVAGA+S+TCT+PL RL IL QV  M+   +    +   I +    + + EGF  F+KGN   +    PYS++ F +YE YK  L       +  +      + +   GG AG+T+   TYPLDL+R+RL  Q     Y GI    + I R+EG+ GLY GL A+
Sbjct:  142 LLSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAPKYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLL------NNNDQTHLTTYENLFVGGAAGVTSLLCTYPLDLIRSRLTVQVFGNKYNGIADTCKMIIREEGVAGLYKGLFAS 304          

HSP 2 Score: 81.2629 bits (199), Expect = 7.053e-15
Identity = 61/175 (34.86%), Postives = 82/175 (46.86%), Query Frame = 1
Query:  283 TISQLLAGGVAGALSKTCTAPL----ARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQ---TNVIYYRGICHALQTICRDEGIWGLYXGL 786
            T   L  GG AG  S  CT PL    +RLT+  QV G   +        I      II EEG    +KG   +     PY ++NF  YE+ KK    IP      ++ +  +      G ++G TA ++TYP+DL+R RL  Q      I Y G   A + I RDEG+ GLY G+
Sbjct:  241 TYENLFVGGAAGVTSLLCTYPLDLIRSRLTV--QVFGNKYN-------GIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTF--IP------KDTTPTVVQSLTFGAISGATAQTLTYPIDLIRRRLQVQGIGGKDILYNGTFDAFRKIIRDEGVLGLYNGM 398          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.731e-24
Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  292 QLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXG 783
            QLLAGG+AGA+S+T TAPL RL I+ QV G  SD     K +I+    +++ E G R+ W+GN   +    P ++V F+AYE YKKLL        +G+ + +  F  F+SG +AG TA +  YP+++++TRLA       Y GI    + I + EG+   Y G
Sbjct:  197 QLLAGGIAGAVSRTSTAPLDRLKIMMQVHGSKSD-----KMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLL------TEEGQKIGT--FERFISGSMAGATAQTFIYPMEVMKTRLAV-GKTGQYSGIYDCAKKILKHEGLGAFYKG 346          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: EAAC_ARATH (Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.364e-24
Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 1
Query:  301 AGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIIS-EEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXGLGATL 798
            AG +AGA +KT TAPL R+ +L Q  G+     + +KA  + EA  +I+ EEG + +WKGNL  +   LPYS+V   AYE YK L         +G++    +     +G  AG+T+  +TYPLD++R RLA +     YR +     ++ RDEGI   Y GLG +L
Sbjct:   93 AGALAGAAAKTVTAPLDRIKLLMQTHGIRLGQQSAKKAIGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYESYKNLF--------KGKDDQLSVIGRLAAGACAGMTSTLLTYPLDVLRLRLAVEPR---YRTMSQVALSMLRDEGIASFYYGLGPSL 248          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: TAAC_ARATH (Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.418e-23
Identity = 62/167 (37.13%), Postives = 94/167 (56.29%), Query Frame = 1
Query:  301 AGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIIS-EEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXGLGATL 798
            AG  AGA +K+ TAPL R+ +L Q  G+ +   + +KA  + EA  +I  EEG + +WKGNL  +   +PYS+V  +AYE YKKL         +G++    +     +G  AG+T+  +TYPLD++R RLA +     YR +      + R+EG+   Y GLG +L
Sbjct:  121 AGAFAGAAAKSVTAPLDRIKLLMQTHGVRAGQQSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETYKKLF--------RGKDGQLSVLGRLGAGACAGMTSTLITYPLDVLRLRLAVEPG---YRTMSQVALNMLREEGVASFYNGLGPSL 276          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.388e-23
Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = 1
Query:  292 QLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXG 783
            QLLAGGVAGA+S+T TAPL RL ++ QV G  S      K +I+    +++ E G R+ W+GN   +    P ++V F+AYE YKKLL        +G+ + +  F  FVSG +AG TA +  YP+++++TRLA       Y G+    + I + EG+   Y G
Sbjct:  197 QLLAGGVAGAVSRTSTAPLDRLKVMMQVHGSKS-----AKMNIYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLL------TEEGQKIGT--FERFVSGSMAGATAQTFIYPMEVLKTRLAV-GKTGQYSGMFDCAKKILKYEGMGAFYKG 346          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.190e-23
Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = 1
Query:  292 QLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLA-AQTNVIYYRGICHALQTICRDEGIWGLYXG 783
            QLLAGGVAGA+S+T TAPL RL ++ QV G  S        +I+    +++ E G R+ W+GN   +    P ++V F+AYE YKKLL        +G+ + +  F  F+SG +AG TA +  YP+++++TRLA A+T    Y GI    + I + EG    Y G
Sbjct:  197 QLLAGGVAGAVSRTSTAPLDRLKVMMQVHGSKS-------MNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLL------TEEGQKLGT--FERFISGSMAGATAQTFIYPMEVLKTRLAVAKTG--QYSGIYGCAKKILKHEGFGAFYKG 344          

HSP 2 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 49/172 (28.49%), Postives = 82/172 (47.67%), Query Frame = 1
Query:  277 IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNV--IYYRGICHALQTICRDEGIWGLYXGL 786
            +GT  + ++G +AGA ++T   P+  L     V        T + + I+  A +I+  EGF AF+KG +  +   +PY+ ++   YE    LL +  +     ++++  + V    G L+       +YPL LVRTR+ AQ  V       +    Q I   EG+ GLY G+
Sbjct:  284 LGTFERFISGSMAGATAQTFIYPMEVLKTRLAV------AKTGQYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYE----LLKSYWLDNFAKDSVNPGVMVLLSCGALSSTCGQLASYPLALVRTRMQAQATVEGAPQLSMVGLFQRIVSKEGVSGLYRGI 445          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.047e-22
Identity = 65/171 (38.01%), Postives = 97/171 (56.73%), Query Frame = 1
Query:  286 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXGLGATL 798
            ++ L++G +AGA++KT  APL R  I+FQV    S+  + ++A  +R   R    EGF + W+GN  T+   +PY+++ F A+E YKKLL +      QG  ++       ++G LAG TA  +TYPLDLVR R+A  T    Y  I H    + R+EG+  LY G   T+
Sbjct:   37 LNSLMSGALAGAVAKTAVAPLDRTKIIFQVS---SNRFSAKEA--YRLIYRTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGS--YYGFQGSALTP--IPRLLAGALAGTTATIITYPLDLVRARMAV-TPKEMYSNIIHVFMRMSREEGLKSLYRGFTPTV 197          

HSP 2 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 56/169 (33.14%), Postives = 80/169 (47.34%), Query Frame = 1
Query:  286 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRL-AAQTNVIYYRGICHALQTICRDEG-IWGLYXGL 786
            I +LLAG +AG  +   T PL  +     V      T     ++I     R+  EEG ++ ++G   T+   +PY+ ++F+ YE  KK LHA    E  G       F   + G  AG+   S +YPLD+VR R+  A      Y  I   +Q I  +EG I GLY GL
Sbjct:  135 IPRLLAGALAGTTATIITYPLDLVRARMAV------TPKEMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKK-LHA----EHSGRTQPYP-FERLLFGACAGLFGQSASYPLDVVRRRMQTAGVTGHAYGSIIGTMQEIVAEEGVIRGLYKGL 291          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: S2542_RAT (Solute carrier family 25 member 42 OS=Rattus norvegicus GN=Slc25a42 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.674e-22
Identity = 68/175 (38.86%), Postives = 96/175 (54.86%), Query Frame = 1
Query:  286 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIIS----EEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXGLGATL 798
            +S LL+G +AGAL+KT  APL R  I+FQV                +EA R++      EGF + W+GN  T+   +PY+++ F A+E YK++L        +GE +    +   ++G LAG TAAS+TYPLDLVR R+A  T    Y  I H    I R+EG+  LY G   T+
Sbjct:   34 LSSLLSGALAGALAKTAVAPLDRTKIIFQVSSKRFSA---------KEAFRLLYFTYLNEGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKRILG--HYYGFRGEALPP--WPRLLAGALAGTTAASLTYPLDLVRARMAV-TPKEMYSNIFHVFIRISREEGLKTLYFGFTPTV 194          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: S2542_MOUSE (Solute carrier family 25 member 42 OS=Mus musculus GN=Slc25a42 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.674e-22
Identity = 68/175 (38.86%), Postives = 96/175 (54.86%), Query Frame = 1
Query:  286 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIIS----EEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXGLGATL 798
            +S LL+G +AGAL+KT  APL R  I+FQV                +EA R++      EGF + W+GN  T+   +PY+++ F A+E YK++L        +GE +    +   ++G LAG TAAS+TYPLDLVR R+A  T    Y  I H    I R+EG+  LY G   T+
Sbjct:   34 LSSLLSGALAGALAKTAVAPLDRTKIIFQVSSKRFSA---------KEAFRLLYFTYLNEGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKRILG--HYYGFRGEALPP--WPRLLAGALAGTTAASLTYPLDLVRARMAV-TPKEMYSNIFHVFIRISREEGLKTLYFGFTPTV 194          
BLAST of FC870813 vs. ExPASy Swiss-Prot
Match: S2542_HUMAN (Solute carrier family 25 member 42 OS=Homo sapiens GN=SLC25A42 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.674e-22
Identity = 68/175 (38.86%), Postives = 96/175 (54.86%), Query Frame = 1
Query:  286 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIIS----EEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYXGLGATL 798
            +S LL+G +AGAL+KT  APL R  I+FQV                +EA R++      EGF + W+GN  T+   +PY+++ F A+E YK++L +      +GE +    +    +G LAG TAAS+TYPLDLVR R+A  T    Y  I H    I R+EG+  LY G   T+
Sbjct:   34 LSSLLSGALAGALAKTAVAPLDRTKIIFQVSSKRFSA---------KEAFRVLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS--YYGFRGEALPP--WPRLFAGALAGTTAASLTYPLDLVRARMAV-TPKEMYSNIFHVFIRISREEGLKTLYHGFMPTV 194          

HSP 2 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 53/167 (31.74%), Postives = 78/167 (46.71%), Query Frame = 1
Query:  292 QLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYR-GICHALQTICRDEG-IWGLYXGL 786
            +L AG +AG  + + T PL  +     V      T     ++I+    RI  EEG +  + G + T+   +PY+ ++F+ YE  K L       E  G       F   + G  AG+   S +YPLD+VR R+       Y R  I   L+TI R+EG + GLY GL
Sbjct:  134 RLFAGALAGTTAASLTYPLDLVRARMAV------TPKEMYSNIFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHR-----EYSGRRQPYP-FERMIFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIARTLRTIVREEGAVRGLYKGL 288          
The following BLAST results are available for this feature:
BLAST of FC870813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
MCFB_DICDI1.675e-2439.05Mitochondrial substrate carrier family protein B O... [more]
SCMC1_HUMAN3.731e-2439.63Calcium-binding mitochondrial carrier protein SCaM... [more]
EAAC_ARATH6.364e-2438.92Probable envelope ADP,ATP carrier protein, chlorop... [more]
TAAC_ARATH2.418e-2337.13Thylakoid ADP,ATP carrier protein, chloroplastic O... [more]
SCMC1_BOVIN5.388e-2339.02Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_MOUSE9.190e-2339.39Calcium-binding mitochondrial carrier protein SCaM... [more]
S2542_XENTR2.047e-2238.01Solute carrier family 25 member 42 OS=Xenopus trop... [more]
S2542_RAT2.674e-2238.86Solute carrier family 25 member 42 OS=Rattus norve... [more]
S2542_MOUSE2.674e-2238.86Solute carrier family 25 member 42 OS=Mus musculus... [more]
S2542_HUMAN2.674e-2238.86Solute carrier family 25 member 42 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2CE11ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2CE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870813 ID=FC870813; Name=FC870813; organism=Citrus clementina; type=EST; length=798bp
CGCGCCGGGGCTGAAACCTTTAAACAAAATGGAAGGAACGTTGTTGATTT
ATTGGCTAAATTTTCGAAAAAGTTCAAATTTTTTACTCTGTCATTAGCGT
TTCCAGAAATGGAGCTTGAGGGTTTTTGACTTACATTAGGGATGCAAACA
GAAGCAAGAGTAGGGGTGGTGGTAGAAGGAGGCCAAAGAGGTTTAAGTTC
AGGCAATGGAAGTGTTTCTGTTGACAAAATAACGCTGCAACAGCAACAGA
AACAAATGTTGCAGAATCAGTCCCAGATCGGGACAATATCCCAGCTTTTA
GCTGGAGGTGTAGCTGGTGCTCTTAGTAAAACCTGTACGGCTCCTCTTGC
AAGGCTTACCATTCTCTTTCAGGTGCAAGGCATGCACTCTGATACTGCAA
CATTGAGAAAGGCTAGCATATGGCGTGAGGCTTCCCGAATCATTAGTGAA
GAAGGATTTAGGGCTTTTTGGAAAGGGAATCTGGTCACAATTGCTCACCG
ACTACCATATTCTTCTGTCAACTTTTATGCATATGAACACTATAAAAAGT
TGCTACACGCCATTCCAGTGGTGGAAAGTCAAGGGGAAAATATGAGTTCA
GATCTTTTTGTACATTTTGTAAGTGGTGGTTTAGCAGGAATAACAGCTGC
CTCTGTTACATACCCATTGGACCTTGTGAGGACACGCCTTGCTGCTCAGA
CAAATGTGATCTACTACAGAGGTATTTGTCATGCTTTACAAACTATTTGC
AGAGATGAGGGAATTTGGGGCCTTTATAANGGCCTTGGTGCAACGCTT
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