FC870880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870880 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 5.139e-20 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = -3 Query: 6 QVEVLCNIRHPNMVLLLGACPEFGCLIYEYMANGSLEDRLFRRGGSPVLPWQIRFRIAAEIATALLF 206 ++E+L IRHP++VLLLGACPE G L+YEYM NGSLEDRLF+ SP LPW RFRIA E+A AL+F Sbjct: 523 ELEILSKIRHPHLVLLLGACPEQGALVYEYMENGSLEDRLFQVNNSPPLPWFERFRIAWEVAAALVF 589
BLAST of FC870880 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.331e-19 Identity = 42/67 (62.69%), Postives = 54/67 (80.60%), Query Frame = -3 Query: 6 QVEVLCNIRHPNMVLLLGACPEFGCLIYEYMANGSLEDRLFRRGGSPVLPWQIRFRIAAEIATALLF 206 ++E+L IRHP++VLLLGACPE GCL+YEYM NGSL+DRL +P +PW RFRIA E+A+AL+F Sbjct: 533 ELEILSKIRHPHLVLLLGACPERGCLVYEYMDNGSLDDRLMLVNDTPPIPWFERFRIALEVASALVF 599
BLAST of FC870880 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.421e-19 Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = -3 Query: 6 QVEVLCNIRHPNMVLLLGACPEFGCLIYEYMANGSLEDRLFRRGGSPVLPWQIRFRIAAEIATALLF 206 +VEVL +RHP++VLLLGACPE GCL+YEY+ NGSLE+ +F R P LPW IRFR+ E+A L F Sbjct: 485 EVEVLSQLRHPHVVLLLGACPENGCLVYEYLENGSLEEYIFHRKNKPPLPWFIRFRVIFEVACGLAF 551
BLAST of FC870880 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.692e-19 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = -3 Query: 6 QVEVLCNIRHPNMVLLLGACPEFGCLIYEYMANGSLEDRLFRRGGSPVLPWQIRFRIAAEIATALLF 206 ++E+L IRHP++VLLLGACP+ G L+YEYM NGSLEDRLF+ S +PW +R RIA E+A+AL+F Sbjct: 503 ELEILSKIRHPHLVLLLGACPDHGALVYEYMENGSLEDRLFQVNDSQPIPWFVRLRIAWEVASALVF 569
BLAST of FC870880 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15 Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = -3 Query: 6 QVEVLCNIRHPNMVLLLGACPEFGCLIYEYMANGSLEDRLFRRGGS------PVLPWQIRFRIAAEIATALLF 206 ++E+L IRHP+++LLLGACPE G L+YEYM NGSLE+RL +R + P L W RFRIA EIA+AL F Sbjct: 472 ELEILSKIRHPHLLLLLGACPERGSLVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYF 544
BLAST of FC870880 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = -3 Query: 6 QVEVLCNIRHPNMVLLLGACPEFGCLIYEYMANGSLEDRLFRRGGSPVLPWQIRFRIAAEIATALLF 206 +V+VL +RHPN++ L+GACPE L+YEY+ GSLEDRL + SP L WQ R RIA EI AL+F Sbjct: 524 EVDVLSKMRHPNIITLIGACPEGWSLVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVF 590
BLAST of FC870880 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = -3 Query: 6 QVEVLCNIRHPNMVLLLGACPEFGCLIYEYMANGSLEDRLFRRGGSPVLPWQIRFRIAAEIATALLF 206 +VE+L +RHPN+V L+GACPE LIY+Y+ NGSLED P L W+ R RIA+EI +ALLF Sbjct: 503 RVEILSRVRHPNLVTLMGACPESRSLIYQYIPNGSLEDCFSSENNVPALSWESRIRIASEICSALLF 569 The following BLAST results are available for this feature:
BLAST of FC870880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC870880 ID=FC870880; Name=FC870880; organism=Citrus clementina; type=EST; length=313bpback to top |