FC870895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870895 vs. ExPASy Swiss-Prot
Match: WDR26_DANRE (WD repeat-containing protein 26 OS=Danio rerio GN=wdr26 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.027e-14 Identity = 49/180 (27.22%), Postives = 85/180 (47.22%), Query Frame = 3 Query: 324 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKIGLVDES--VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVFAPKACMFHNS 857 + +R+I + L+ LG ++ L +ESG L S F +++G WD++ L+++ + S + FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L + A SR +M+P RRL+ L+ QA+ C++HN+ Sbjct: 54 DVIRLIGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNELKALMHSPNAIVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPLKYNTDRIHVLSGYLMCSHAEDLKAKAEWEGKGAGSRCRLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNT 233
BLAST of FC870895 vs. ExPASy Swiss-Prot
Match: WDR26_XENTR (WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12 Identity = 64/266 (24.06%), Postives = 104/266 (39.10%), Query Frame = 3 Query: 144 EDDEPASKRMKLSSVE-LRGLSNGSAFREPVAGSLRDLMARPLPSEGDENVIGPAGVIKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKIGLVDES---------------------------VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVFAPKACMFHNS 857 E EPA LSS L G + +P + L S+ DE+VI R+I + L+ LG ++ L +ESG L F +++G WD++ L+++ + S V++ FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L + SR +M+P RRL+ L+ QA+ C++HN+ Sbjct: 27 ESSEPAHSNGVLSSNNGLSGTGSTGPTEQPGGRKKKRL------SQADEDVI------------RLIGQHLHGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGEWDKAENDLNELKSLVHSPHAVAACRPSSGGSGSEHSPTSCPTADVIRRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHADDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNT 274
BLAST of FC870895 vs. ExPASy Swiss-Prot
Match: WDR26_HUMAN (WD repeat-containing protein 26 OS=Homo sapiens GN=WDR26 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11 Identity = 60/233 (25.75%), Postives = 97/233 (41.63%), Query Frame = 3 Query: 213 SAFREPVAGSLRDLMARPLPSEGDENVIGPAGVIKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKIGLVDES----VVKSA--------------SFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVFAPKACMFHNS 857 S+ P GS L + S+ DE+VI R+I + L LG ++ L +ESG L F +++G WD++ L+++ + S VV+ A FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L + SR +M+P RRL+ L+ QA+ C++HN+ Sbjct: 103 SSLATPELGS--SLKKKKRLSQSDEDVI------------RLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNT 321
BLAST of FC870895 vs. ExPASy Swiss-Prot
Match: WDR26_MOUSE (WD repeat-containing protein 26 OS=Mus musculus GN=Wdr26 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11 Identity = 50/196 (25.51%), Postives = 85/196 (43.37%), Query Frame = 3 Query: 324 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKIGLVDES----VVKSA--------------SFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVFAPKACMFHNS 857 + +R+I + L LG ++ L +ESG L F +++G WD++ L+++ + S VV+ A FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L + SR +M+P RRL+ L+ QA+ C++HN+ Sbjct: 106 DVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNT 301 The following BLAST results are available for this feature:
BLAST of FC870895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC870895 ID=FC870895; Name=FC870895; organism=Citrus clementina; type=EST; length=859bpback to top |