FC871082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBC25_ARATH (Probable ubiquitin carrier protein E2 25 OS=Arabidopsis thaliana GN=UBC25 PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 3.652e-92 Identity = 161/249 (64.66%), Postives = 187/249 (75.10%), Query Frame = 2 Query: 122 EEPIDTPSGEDCSRNKESLDGDDVLMRFKLFKQFDAVEDHSDHYYASNVSSLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKA 868 E PI P RN E D L + FK+FD VED SDH+YAS ++ +Q S KRIQ+EW+ILE DLP+ IFVR YESRMDLLRAVI+GA+GTPYHDGLFFFD+FFP YP+ PP VHYHSGGLR+NPNLYNCGKVCLSLL TW G++ EKWIP+ STMLQVLVSIQ LILN++PYFNEPG+E GE S Y+E FILSLKTM+YT+RRPPK+F DF GHF+ AHD+L AC A Sbjct: 280 EPPILPPDDSRVKRNME-----DYLGLYLFFKRFDIVEDFSDHHYASKGTTSKQHSKDWAKRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQKPYFNEPGYERSAGSAHGESTSKAYSENTFILSLKTMVYTMRRPPKYFEDFAYGHFFSCAHDVLKACNA 523
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBC26_ARATH (Probable ubiquitin carrier protein E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2) HSP 1 Score: 324.324 bits (830), Expect = 5.457e-88 Identity = 147/219 (67.12%), Postives = 177/219 (80.82%), Query Frame = 2 Query: 212 FKQFDAVEDHSDHYYASNVSSLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKA 868 FK+FD VED SDH+YAS S +Q S VK++Q +WKILENDLP+ I VR ESRMDLLRAVI+GAEGTPYHDGLFFFD+ FP YP+VPPNVHYHSGGLR+NPNLYNCGKVCLSLL TW G EKW+P+ STMLQ+LVSIQALILNE+PYFNEPG+ GE +S +Y+E F+LSLKTM+Y++RRPP+HF ++V H++ R+HDI+ AC A Sbjct: 244 FKRFDTVEDFSDHHYASKGKSSKQHSKNWVKKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSAGTASGESKSKVYSENVFLLSLKTMVYSIRRPPQHFEEYVQNHYFVRSHDIVKACNA 462
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBC24_ARATH (Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana GN=UBC24 PE=2 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.721e-71 Identity = 126/221 (57.01%), Postives = 159/221 (71.95%), Query Frame = 2 Query: 212 FKQFDAVEDHSDHYYASNVSSLEQP--SNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKA 868 F+QFD V D SDH++ S+ L Q + VK++Q+EW LE +LP+TI+VRV E RMDLLRA +VGA GTPYHDGLFFFD+ P YP+ PP VHYHSGG+RLNPNLY G+VCLSLLNTW G E W S++LQ+L+S QAL+LNE+PYFNE G++ EGE+ S YNE AF+++ K+M+ +R+PPKHF V HF RA +LAACKA Sbjct: 633 FRQFDMVNDCSDHHFLSSDKGLAQSQVTKSWVKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVLNEKPYFNEAGYDKQLGRAEGEKNSVSYNENAFLITCKSMISMLRKPPKHFEMLVKDHFTHRAQHVLAACKA 853
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBC23_ARATH (Probable ubiquitin carrier protein E2 23 OS=Arabidopsis thaliana GN=UBC23 PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 5.132e-70 Identity = 124/219 (56.62%), Postives = 157/219 (71.69%), Query Frame = 2 Query: 212 FKQFDAVEDHSDHYYASNVSSLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKA 868 F++FD +D DH++ V + + K++ ++WKIL+N+LPD IFVR YE RMDLLRAVIVGA GTPY DGLFFFD PSDYP+VPP+ +YHSGG RLNPNLY GKVCLSLLNTW G NE W P S++LQVLVS+Q L+LN +PYFNE G++ EGE+ S YNE F+L+ KTM+Y +R+PPK F + + HF +R + IL AC A Sbjct: 824 FRRFDISQDPLDHHFLG-VDGQKTKERQWFKKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLGYNENTFLLNCKTMMYLMRKPPKDFEELIKDHFRKRGYYILKACDA 1041
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.720e-41 Identity = 98/250 (39.20%), Postives = 139/250 (55.60%), Query Frame = 2 Query: 170 ESLDGDDVLMRFKL-FKQFDAVEDHSD---------HYYASNVSSLEQPSNKLVKRIQEEWKILENDLP----DTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLK-TMLYTVRRPPKHFNDFVSGHFYQRAHDILAACK 865 +SL+ V + KL F F+ V + D HY + ++ + S +R+ +E L LP ++FVR E R+D+++ +I G TPY +G F FDV+FP DYP+ PP V+ + G +R NPNLYN GKVCLS+LNTW G EKW P S+ LQVLVS+Q+LIL PYFNEPG+E G + S Y+ ++K ML +R P F + + HFY + +I+A C+ Sbjct: 4494 KSLEEKYVAVMKKLQFDTFEMVSEDEDGKLGFKVNYHYMSQVKNANDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEIMAQCE 4743
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBE2O_MOUSE (Ubiquitin-conjugating enzyme E2 O OS=Mus musculus GN=Ube2o PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 3.244e-40 Identity = 88/204 (43.14%), Postives = 120/204 (58.82%), Query Frame = 2 Query: 221 FDAVEDHSDHYYASNVSSLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSG-GLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHF 829 F +E ++ + + K +++E +L LPD I V+ +E RMDL A+I G TPY DGL+ FD+ P+ YP VPP+ Y S RLNPNLY+ GKVC+SLL TW G E+W S S++LQVL+SIQ LIL PY+NE G++S ++EG S YNE A I +++M VRRPP+ F + HF Sbjct: 926 FSVLEFAPSNHSFKKIEFQPPEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHF 1128
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBE2O_HUMAN (Ubiquitin-conjugating enzyme E2 O OS=Homo sapiens GN=UBE2O PE=1 SV=3) HSP 1 Score: 164.081 bits (414), Expect = 9.439e-40 Identity = 87/204 (42.65%), Postives = 120/204 (58.82%), Query Frame = 2 Query: 221 FDAVEDHSDHYYASNVSSLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSG-GLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHF 829 F +E ++ + + K +++E +L LP+ I V+ +E RMDL A+I G TPY DGL+ FD+ P+ YP VPP+ Y S RLNPNLY+ GKVC+SLL TW G E+W S S++LQVL+SIQ LIL PY+NE G++S ++EG S YNE A I +++M VRRPP+ F + HF Sbjct: 929 FSVLEFAPSNHSFKKIEFQPPEAKKFFSTVRKEMALLATSLPEGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHF 1131
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBC3_MIMIV (Probable ubiquitin-conjugating enzyme E2 R521 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R521 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.552e-33 Identity = 85/250 (34.00%), Postives = 129/250 (51.60%), Query Frame = 2 Query: 158 SRNKESLDGDDVLMRFKLFKQFDAVEDHS-DHYYASNVSSLEQPSNKLV-----KRIQEEWKILENDLP----DTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHS---GGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLK-TMLYTVRRPPKHFNDFVSGHFYQRAHDILAACK 865 S NKE + +DV +K+ + ++++ D +N+ + + L+ K I E +LP +I+ R + +I G E +PY G F F ++ PS YPN P V + G +R NPNLY GKVCLS+L TW G E WIP +S+MLQV++SIQ+L+L PYFNEPG+ES ++G + S YN++ +K M+ ++ P F + HF +A I C+ Sbjct: 1162 SNNKEEVISNDVKDLYKITLGNEVFQEYNLDLNKFANMLTNDTKKEGLIHKDALKAISRELLSHSKNLPVEYGSSIYYRYSPENIRYHEFIITGPEDSPYDSGCFHFRMYNPSAYPNTSPFVSMTTTGHGSVRFNPNLYADGKVCLSILGTWRGQAGESWIPGVSSMLQVMISIQSLVLISEPYFNEPGYESSRGTDKGNKLSTEYNQKVRFNCMKWAMIDVIKNPVPGFESMIKKHFSIKAPHIKQVCQ 1411
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.948e-25 Identity = 62/139 (44.60%), Postives = 86/139 (61.87%), Query Frame = 2 Query: 257 ASNVSSLEQPSNKLVKRIQEEWKILENDLP----DTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHY---HSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALI 652 A N++ KRI +E + N LP ++I+V E R+D+++ +I G + TPY +GLF FD+FFP+ YP PP + SG +R NPNLYN GK+CLS+L TW+G EKW P S ++QVLVSIQ +I Sbjct: 397 AKNINPFSPHLRDRTKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCS-LMQVLVSIQEVI 534
BLAST of FC871082 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENTR (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.870e-20 Identity = 64/158 (40.51%), Postives = 82/158 (51.90%), Query Frame = 2 Query: 278 EQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNE 742 E+ SN+ V RI+ + + + P +FV M + A+I G TPY G F F P DYP PP V + G +R NPN Y GKVCLS+L TW G W P+ S + VL+SIQ+L + E PY NEPG+E E S YNE Sbjct: 53 ERASNQCVLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTG---PAWSPAQS-LSSVLISIQSL-MTENPYHNEPGFE----QERHSGDSKNYNE 201 The following BLAST results are available for this feature:
BLAST of FC871082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871082 ID=FC871082; Name=FC871082; organism=Citrus clementina; type=EST; length=868bpback to top |