FC871952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1A_ARATH (RING-box protein 1a OS=Arabidopsis thaliana GN=RBX1A PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.082e-57 Identity = 100/118 (84.75%), Postives = 101/118 (85.59%), Query Frame = 2 Query: 95 MATLDSDVPMVPVGEXXXXXXXXXXXXXXXRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 448 MATLDSDV M+P GE RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH Sbjct: 1 MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1_SALSA (RING-box protein 1 OS=Salmo salar GN=rbx1 PE=2 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 2.882e-50 Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 448 RFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH Sbjct: 21 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1_MOUSE (RING-box protein 1 OS=Mus musculus GN=Rbx1 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.882e-50 Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 448 RFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH Sbjct: 21 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1_HUMAN (RING-box protein 1 OS=Homo sapiens GN=RBX1 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.882e-50 Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 448 RFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH Sbjct: 21 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1B_ARATH (RING-box protein 1b OS=Arabidopsis thaliana GN=RBX1B PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.764e-50 Identity = 93/118 (78.81%), Postives = 96/118 (81.36%), Query Frame = 2 Query: 95 MATLDSDVPMVPVGEXXXXXXXXXXXXXXXRFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 448 MA+L+SDV M GE RFE+KKWSAVALWAWDIVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD EWEFQKYGH Sbjct: 1 MASLNSDVIM---GESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH 115
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1A_DROME (RING-box protein 1A OS=Drosophila melanogaster GN=Roc1a PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.420e-50 Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 448 RFE+KKW+AVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EW+FQKYGH Sbjct: 21 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWDFQKYGH 108
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1_CAEEL (RING-box protein 1 OS=Caenorhabditis elegans GN=rbx-1 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 8.677e-47 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 448 RFE+KKWSAVALWAWDI VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHAFHFHCISRWLKTRQVCPLDN EWEFQKYGH Sbjct: 23 RFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 110
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1_DICDI (RING-box protein 1 OS=Dictyostelium discoideum GN=rbx1 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.933e-46 Identity = 77/87 (88.51%), Postives = 84/87 (96.55%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 445 +FE+K+W+AVALW WDIVVDNCAICRNHIMDLCIECQANQAS TSEECTVAWG+CNHAFHFHCISRWLK+RQVCPLDN +WEFQKYG Sbjct: 17 KFEVKRWNAVALWIWDIVVDNCAICRNHIMDLCIECQANQASNTSEECTVAWGICNHAFHFHCISRWLKSRQVCPLDNRDWEFQKYG 103
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1_SCHPO (RING-box protein pip1 OS=Schizosaccharomyces pombe GN=pip1 PE=1 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 3.645e-45 Identity = 76/88 (86.36%), Postives = 80/88 (90.91%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 448 RFEIKKW+AVALW WDIVVDNCAICRNHIMDLCIECQAN SA ++ECTVAWG CNHAFHFHCISRWL TR VCPLDN EWEFQ+YGH Sbjct: 20 RFEIKKWNAVALWQWDIVVDNCAICRNHIMDLCIECQANTDSAAAQECTVAWGTCNHAFHFHCISRWLNTRNVCPLDNREWEFQRYGH 107
BLAST of FC871952 vs. ExPASy Swiss-Prot
Match: RBX1B_DROME (RING-box protein 1B OS=Drosophila melanogaster GN=Roc1b PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37 Identity = 64/87 (73.56%), Postives = 74/87 (85.06%), Query Frame = 2 Query: 185 RFEIKKWSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG 445 RF +KKW A A+W WD+ VDNCAICRNHIM+LCIECQA+ +A +ECTVAWG CNHAFH+HCI+RWLKTR VCPLDN EW +QKYG Sbjct: 36 RFVVKKWVAHAMWGWDVAVDNCAICRNHIMNLCIECQADP-NANQDECTVAWGECNHAFHYHCIARWLKTRLVCPLDNKEWVYQKYG 121 The following BLAST results are available for this feature:
BLAST of FC871952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871952 ID=FC871952; Name=FC871952; organism=Citrus clementina; type=EST; length=667bpback to top |