FC871967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.123e-69 Identity = 121/136 (88.97%), Postives = 130/136 (95.59%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 KSEA YE VYGEPI VKELA RVASYVHLCTLYWWL+PFGCGVILGGYDRDGPQLYMIEPSG+SY+YFGAA+GKGRQAAKTEIEKLKLSE+TCR G++EVAKIIYGVHDEAKDKAFELE+SW+CDESNRQHQKVP Sbjct: 93 KSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVAKIIYGVHDEAKDKAFELELSWICDESNRQHQKVP 228
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.467e-69 Identity = 123/136 (90.44%), Postives = 130/136 (95.59%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 KSEAT YESVYGE +PVKELA RVASYVHLCTLYWWL+PFGCGVILGGYDRDGPQLYM+EPSGISYRYFGAAIGKG+QAAKTEIEKLKLSEMTCR G+IEVAKIIY VHDEAKDKAFELEMSW+CDES R+HQKVP Sbjct: 93 KSEATNYESVYGEAVPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCREGIIEVAKIIYKVHDEAKDKAFELEMSWICDESKREHQKVP 228
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_ARATH (Proteasome subunit alpha type-3 OS=Arabidopsis thaliana GN=PAG1 PE=1 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 5.218e-67 Identity = 118/136 (86.76%), Postives = 129/136 (94.85%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 KSEA YESVYG+ +PVKEL++RVASYVHLCTLYWWL+PFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKG+QAAKTEIEKL LSEMTC+ GVIEVAKIIY +HDEAKDKAFELEMSW+C+ES R+HQKVP Sbjct: 93 KSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCKEGVIEVAKIIYKLHDEAKDKAFELEMSWICEESKREHQKVP 228
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 4.023e-43 Identity = 79/136 (58.09%), Postives = 105/136 (77.21%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 +SEA Y+S YG+PIP+K L+QR+ASY H+ TLY ++PFGC + + G D+ GPQL+++EPSG YFGA++GKG+QAAK E+EK+K SEMTCR + EV++IIY VHDE KDK FELE+ W+ E+N HQ VP Sbjct: 93 RSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGIDQYGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEKIKFSEMTCREAIKEVSRIIYSVHDEVKDKDFELELGWISTETNNVHQIVP 228
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_ACACA (Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba castellanii PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.863e-43 Identity = 86/137 (62.77%), Postives = 106/137 (77.37%), Query Frame = 2 Query: 2 GKSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 G++EAT Y YG I K L +R++++V L +LY ++PFG VILG D++GPQLYMIEPSGIS+ YFG AIGKG +AAKTEIEKLKLSEMT R + E AKIIY VHD+AKDKAFELE+SWVC+E+ H+ VP Sbjct: 90 GRAEATSYREFYGTDISGKVLNERLSNFVQLYSLYGSVRPFGTSVILGCVDKNGPQLYMIEPSGISWGYFGVAIGKGARAAKTEIEKLKLSEMTAREAIKEAAKIIYSVHDDAKDKAFELELSWVCEETGNLHKFVP 226
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 2.883e-41 Identity = 86/137 (62.77%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 + EA+ + S +G IP+K LA RVA YVH TLY ++PFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAKTEIEKL++ EMTCR V EVAKIIY VHDE KDKAFELE+SWV + +N +H+ VP Sbjct: 93 REEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGEITNGRHEIVP 229
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.766e-41 Identity = 86/137 (62.77%), Postives = 104/137 (75.91%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 + EA+ + S +G IP+K LA RVA YVH TLY ++PFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAKTEIEKL++ EMTCR V EVAKIIY VHDE KDKAFELE+SWV + +N +H+ VP Sbjct: 93 REEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVP 229
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 1.431e-40 Identity = 85/137 (62.04%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 + EA+ + S +G IP+K LA RVA YVH TLY ++PFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAKTEIEKL++ EMTCR V EVAKIIY VHDE KDKAFELE+SWV + + +H+ VP Sbjct: 93 REEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGELTKGRHEIVP 229
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 1.431e-40 Identity = 85/137 (62.04%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYD-RDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 + EA+ + S +G IP+K LA RVA YVH TLY ++PFGC +LG Y DG QLYMI+PSG+SY Y+G AIGK RQAAKTEIEKL++ EMTCR V EVAKIIY VHDE KDKAFELE+SWV + + +H+ VP Sbjct: 93 REEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVGELTKGRHEIVP 229
BLAST of FC871967 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.640e-29 Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 5 KSEATFYESVYGEPIPVKELAQRVASYVHLCTLYWWLKPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCR*GVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 412 + EAT + YG PIP +A R+ +YV L T Y ++PFG + YD +GP LYM+EP+G+ + Y GAA GKGRQ A+ E+EKL S + + V E A+I+Y HDE +K E+EM+WV E+N H VP Sbjct: 92 RDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEAARILYATHDEENNKEHEIEMTWVGVETNGIHTPVP 227 The following BLAST results are available for this feature:
BLAST of FC871967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871967 ID=FC871967; Name=FC871967; organism=Citrus clementina; type=EST; length=860bpback to top |