FC871972

Overview
NameFC871972
Unique NameFC871972
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length564
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC871972 vs. ExPASy Swiss-Prot
Match: ATP5H_ARATH (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana GN=At3g52300 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 9.664e-16
Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 2 
Query:    5 EKEIAEVQELKEKITTMTAEEYFEKHPELKKKFDDEIRNDYWGY 136
            EKEIA+VQE+ +K++TMTA+EYFEKHPELKKKFDDEIRND WGY
Sbjct:  125 EKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168
The following BLAST results are available for this feature:
BLAST of FC871972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATP5H_ARATH9.664e-1681.82ATP synthase subunit d, mitochondrial OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB3DH11ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3DH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871972 ID=FC871972; Name=FC871972; organism=Citrus clementina; type=EST; length=564bp
GGGGGAGAAAGAAATAGCTGAGGTTCAAGAACTGAAGGAAAAGATCACCA
CCATGACCGCTGAGGAATACTTTGAAAAGCATCCGGAGCTCAAAAAGAAG
TTCGATGATGAAATCAGGAATGACTACTGGGGCTATTGATCACACATTTG
CTCAATTTAGCAGCTGCATTTCCTAGCTCGGCCAAGATTTTCTGAAGTTG
CCCTGTTTTCCCAGCTTGTTAAATAATAATGATCATTCGAATTGTTTTTG
CATAAACCTGTTGCTCATGGTTTCAAAAATTTGAGCTTTGATCACATCTA
TGCTAAACATTCAGTTTTCGTGGCAATGCATACATTTTAACTTTAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAGG
ACAAGAAACAAACAAAAGAAAAAAACCTTGCCGCCCCCCCCGCCCCATGC
AACCCAAACCCCGCAAGGCTTGACGGTTGCGGCCAAAATGAAACCTCATT
GGCCAAATCCCCCCAAAGTAGATCCATTTAAAAATCCAAGGGCCGTTGTT
TTCAAACTTCTAGA
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