FC871984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871984 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.004e-23 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 2 Query: 71 ELSENGDLQRIHDKWLTRSACSSQGAKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQERESAGPSSQSSRLQTFISFAGEKEVVIK-NLSKKRKLERAS 409 +LSENGD+QRI DKWL R ACS QGA+ E DRL LKSFW +Y + ++RQF + + E SS S+R+ +F+SF EKE K S++R+LE S Sbjct: 782 QLSENGDMQRIRDKWLLRKACSLQGAEIEVDRLELKSFWGLFVVCGVACVLALAVYTVLMIRQFGQQCPEEAEGSIRRRSSPSARIHSFLSFVKEKEEDAKARSSRERQLEDIS 895 HSP 2 Score: 41.9726 bits (97), Expect = 1.004e-23 Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 3 Query: 9 GWGFAFPRDSPLAVDMSIAIL 71 GWGFAFPR+SPLAVD+S AIL Sbjct: 761 GWGFAFPRNSPLAVDVSAAIL 781
BLAST of FC871984 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.492e-20 Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 74 LSENGDLQRIHDKWLTRSACSSQG---AKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQERESAGPSSQSSR---LQTFISFAGEKEVVIKNLSKKRK 394 LSE G LQ+IHDKWL+RS CS+ + +++++L L+SFW IY +IVR F RH + E+ PS +SSR LQTF+++ EKE K K+++ Sbjct: 790 LSETGQLQKIHDKWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFLVCGISCFIALFIYFFKIVRDFFRH--GKYDEEATVPSPESSRSKSLQTFLAYFDEKEDESKRRMKRKR 900 HSP 2 Score: 45.0542 bits (105), Expect = 3.492e-20 Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = 3 Query: 9 GWGFAFPRDSPLAVDMSIAIL 71 GWGFAFPRDSPLA+DMS AIL Sbjct: 768 GWGFAFPRDSPLAIDMSTAIL 788
BLAST of FC871984 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.593e-19 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 2 Query: 71 ELSENGDLQRIHDKWLTRSACSSQGAKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLD-----LQERESAGPSSQSSRLQTFISFAGEKEVVIKNLSKKRKLERASTGDIDKDKSTDGDLNGSVNPGN 475 EL+ENGDLQRIHDKWL ++AC+ + A+ E+DRLHLKSFW +Y +QI+RQ + D Q++ S +S+RLQ F+S EKE K+ SKKRK++ + +S D S N N Sbjct: 792 ELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDEKE-ESKHESKKRKIDGSMNDTSGSTRSRGFDRERSFNSVN 930
BLAST of FC871984 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 3.074e-13 Identity = 38/124 (30.65%), Postives = 56/124 (45.16%), Query Frame = 2 Query: 71 ELSENGDLQRIHDKWLT-RSACSSQGAKQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQERESAGPSSQSSRLQTFISFAGEKEVVIKNLSKKRKLERASTGDIDKDKST 439 +LSE G+L++IH KWL + CS Q + E +L LKSFW ++ ++ Q+ R + + E AG S+ SR S G + K L K A +I K KS+ Sbjct: 820 QLSEEGELEKIHRKWLNYKHECSMQISNSEDSQLSLKSFWGLFLICGITCFMALTVFFWRVFWQYQRLLPESADEERAGEVSEPSR-----SGRGSRAPSFKELIKVVDKREAEIKEILKQKSS 938 HSP 2 Score: 42.3578 bits (98), Expect = 3.074e-13 Identity = 19/21 (90.48%), Postives = 19/21 (90.48%), Query Frame = 3 Query: 9 GWGFAFPRDSPLAVDMSIAIL 71 GWGFAF RDSPLAVDMS AIL Sbjct: 799 GWGFAFQRDSPLAVDMSTAIL 819
BLAST of FC871984 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 50.0618 bits (118), Expect = 5.443e-12 Identity = 34/116 (29.31%), Postives = 55/116 (47.41%), Query Frame = 2 Query: 71 ELSENGDLQRIHDKWLTRSACSSQGA-KQEADRLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQERESAGPSSQSSRLQT---------FISFAGEKEVVIKNLSKK 388 +LSE LQ I KWL ++ C+ + E ++LHLKSF +++++++RQF R+ ER S+ P + S T F+ F EKE IK + ++ Sbjct: 785 KLSETRKLQEIRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRY--RRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRR 898 HSP 2 Score: 41.9726 bits (97), Expect = 5.443e-12 Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = 3 Query: 9 GWGFAFPRDSPLAVDMSIAIL 71 GWGFAF RDSPLA+DMS AIL Sbjct: 764 GWGFAFKRDSPLAIDMSTAIL 784
BLAST of FC871984 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11 Identity = 41/112 (36.61%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 74 LSENGDLQRIHDKWLTRSACSSQGAKQEAD--RLHLKSFWXXXXXXXXXXXXXXXIYLIQIVRQFARHYLDLQERESAGPSSQSSRL---QTFISFAGEKEVVIKNLSKKRK 394 LSE G+LQ+IHD+WL++S CSS Q D +L++ SFW I+ +I+R F + ++ E+ PS +SSRL QTF++F EKE K K+++ Sbjct: 790 LSETGELQKIHDRWLSKSNCSSPHGSQSGDSEQLNVHSFWGMFLVVGIACLVALFIHFFKIIRDFCKDTPEVVVEEAI-PSPKSSRLTKLQTFLAFVDEKEEETKRRLKRKR 900 The following BLAST results are available for this feature:
BLAST of FC871984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871984 ID=FC871984; Name=FC871984; organism=Citrus clementina; type=EST; length=684bpback to top |