FC872062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.392e-18 Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAA+IYNKDKAWD W+FWVGPF GAAIAAFYHQF+LRAGA+KALG Sbjct: 233 GAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALG 278
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.818e-18 Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAAVIYN KAWDDQW+FWVGPF+GAAIAAFYHQF+LRAGA+KA G Sbjct: 233 GAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYG 278
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.818e-18 Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAAVIYNKDK WDD W+FWVGP +GAAIAAFYHQ+ILRAGA+KALG Sbjct: 239 GAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALG 284
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.101e-18 Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAAV+YNKDK WDD W+FWVGP +GAAIAAFYHQ+ILRAGA+KALG Sbjct: 241 GAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALG 286
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.022e-18 Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAAVIYN +KAWDDQW+FWVGP IGAA AAFYHQFILRA A+KALG Sbjct: 234 GAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALG 279
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 7.637e-17 Identity = 36/46 (78.26%), Postives = 43/46 (93.48%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAAVI+N +KAW + W+FWVGPF+GAAIAAFYHQ+ILRAGA+KALG Sbjct: 239 GAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALG 284
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAAVIYNK K WDD W+FWVGPFIGAAIAAFYHQF+LRA K+LG Sbjct: 232 GAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 277
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAAVIYNK K WDD W+FWVGPFIGAAIAAFYHQF+LRA K+LG Sbjct: 234 GAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 279
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.222e-16 Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 G AVI+N DKAWDDQW++WVGPF+GAA+AA YHQ+ILR A+KALG Sbjct: 236 GPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKALG 281
BLAST of FC872062 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.222e-16 Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 2 Query: 2 GAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 139 GAAVIYN +KAWDDQW+FWVGPF+GA AA YHQ+ILRA A+KALG Sbjct: 227 GAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKALG 272 The following BLAST results are available for this feature:
BLAST of FC872062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872062 ID=FC872062; Name=FC872062; organism=Citrus clementina; type=EST; length=531bpback to top |