FC872204

Overview
NameFC872204
Unique NameFC872204
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OPR2_ARATH (12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=2 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 2.485e-87
Identity = 150/188 (79.79%), Postives = 168/188 (89.36%), Query Frame = 1
Query:  130 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDHL*KDQ 693
            +PL+TPY MG  NLSHRVVLAPLTRQ+SY +VPQPHAILYYSQRT+ GG LIAEATGVSDTAQGYPDTPGIWTKE VEAWKPIVDAVHAKGGIFFCQI HVGRVSN+ +QP  QAPISCT KP+ PQ+R NG+D A+FTPPRRL+ +EIP IVNDFRLAARNA+EAGFDG+E+HGAHG+LID   KD+
Sbjct:   12 VPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNRGFQPRRQAPISCTGKPIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFDGVEIHGAHGYLIDQFMKDK 199          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OPR1_ARATH (12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 5.536e-87
Identity = 151/187 (80.75%), Postives = 165/187 (88.24%), Query Frame = 1
Query:  130 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDHL*KD 690
            +PL+TPY MG  NLSHRVVLAPLTRQRSY NVPQPHA +YYSQRTT GG LI EATGVSDTAQGY DTPGIWTKE VEAWKPIVDAVHAKGGIFFCQI HVGRVSN  +QPNG+APISC+DKPL PQIR+NG+D A FTPPRRL  +EIP IVNDFRLAARNA+EAGFDG+E+HGA+G+LID   KD
Sbjct:   10 VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCSDKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGFDGVEIHGANGYLIDQFMKD 196          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OPR1_SOLLC (12-oxophytodienoate reductase 1 OS=Solanum lycopersicum GN=OPR1 PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.508e-84
Identity = 147/188 (78.19%), Postives = 165/188 (87.77%), Query Frame = 1
Query:  130 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDHL*KDQ 693
            IPL++P  MG   L HRVVLAPLTRQRSY  +PQPHAIL+YSQR+T GGLLI EAT +S+T  GY D PGIWTKEQVEAWKPIVDAVHAKGGIFFCQI HVGRVSN+D+QPNG+ PISCTD+ LTPQIR+NG+DIA FT PRRLTTDEIPQIVN+FR+AARNAIEAGFDG+E+HGAHG+LID   KDQ
Sbjct:   14 IPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIRSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQ 201          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OPRL2_ARATH (Putative 12-oxophytodienoate reductase-like protein 2 OS=Arabidopsis thaliana GN=At1g17990 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.569e-72
Identity = 131/188 (69.68%), Postives = 154/188 (81.91%), Query Frame = 1
Query:  130 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDHL*KDQ 693
            IPL+ PY MG  NLSHRVVLAPLTR RSY N+PQP+A LYY+QRTT GGLLI+E+  VS+T+ GYPD PG+W ++QVEAWKPIVDAVH+KGGIFFCQI H GRV +QD QPNG+AP+S TDKPL  +    G    QF PPRRL +DE+P IVNDFR+AARNAIEAGFDG+E+HGAHG+LID   KD+
Sbjct:    7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSETSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPNGEAPVSSTDKPLMCKNMYGG----QFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQFLKDK 189          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OPRL1_ARATH (Putative 12-oxophytodienoate reductase-like protein 1 OS=Arabidopsis thaliana GN=At1g09400 PE=2 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 1.978e-68
Identity = 120/179 (67.04%), Postives = 141/179 (78.77%), Query Frame = 1
Query:  154 MGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDHL*KD 690
            M + NL+HR+V+AP+ R RSY N+PQPH  LYY QRTT GGLLI+EATGVS+TA  Y + PGIW KEQ+EAWKPIVDAVH+ GGIFFCQ+ H GRVS+QD QPNG++P+S TDKP             +FTPPRRL TDEIP I+NDFRLAARNA EAGFDG+E+HGAHG+LID   KD
Sbjct:    1 MKNFNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAYQNMPGIWRKEQIEAWKPIVDAVHSHGGIFFCQLWHAGRVSHQDCQPNGESPVSSTDKPFADDPSN------EFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKD 173          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OPR3_SOLLC (12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.053e-56
Identity = 109/192 (56.77%), Postives = 134/192 (69.79%), Query Frame = 1
Query:  133 PLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIR------TNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDHL*KD 690
            PL +PY MG  NLSHRVVLAP+TR R+ NN+PQ     YY QR T GG LI E T +S T+ G+P  PGI+TKEQV  WK IVD VHAKG + FCQ+ HVGR S++ YQP G APIS T+KP++ + R      T+G+    +  PR + T EI Q+V D+R +A NAIEAGFDGIE+HGAHG+LID   KD
Sbjct:   11 PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGI----YPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKD 198          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OPR3_ARATH (12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.987e-52
Identity = 103/189 (54.50%), Postives = 132/189 (69.84%), Query Frame = 1
Query:  136 LVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQ----IRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDHL*KD 690
            L + Y MG  +LSHRVVLAP+TR R+ N VP      YY+QRTT GG LI+E T VS  + G+P  PGI++ EQVEAWK +V+AVHAKGG  FCQ+ HVGR S+  YQPNG +PIS T+KP++      +  +G  + ++  PR L   EIP++V D+ L+A NAI AGFDGIE+HGAHG+LID   KD
Sbjct:   12 LFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHV-KYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKD 199          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OPRL_SOLLC (12-oxophytodienoate reductase-like protein OS=Solanum lycopersicum GN=OPR2 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 96/190 (50.53%), Postives = 120/190 (63.16%), Query Frame = 1
Query:  130 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTP-PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAH-GFLIDHL*KDQ 693
            +PL TPY +G   L+HR+V   LTR RS NN PQ H   YYSQR T GGL+I+EA   SD ++  P+ PGIW +EQVEAWKP+V+ VH KGG+FFCQI H GR+S           +S     +     T   D     P P  L +D+IP IVNDFR+AARNAI+AGFDGIE++ +  G+LID    DQ
Sbjct:    9 VPLCTPYKLGRFKLTHRIVFPALTRNRSQNNTPQSHLTEYYSQRATNGGLIISEAAAASDISKECPNLPGIWNEEQVEAWKPVVNGVHEKGGVFFCQIWHSGRLS--------VPTVSALFFSIGIGWSTRPDDKVYAKPTPLPLESDKIPCIVNDFRIAARNAIKAGFDGIEINASSGGYLIDEFMNDQ 190          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: NEMA_ECOLI (N-ethylmaleimide reductase OS=Escherichia coli (strain K12) GN=nemA PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.869e-34
Identity = 84/187 (44.92%), Postives = 114/187 (60.96%), Query Frame = 1
Query:  136 LVTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRT-----NGVDI-AQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLI 672
            L +P  +G++  ++R+ +APLTR RS    ++P P    YY QR +  GL+I+EAT +S  A+GY   PGI + EQ+ AWK I   VHA+ G    Q+ H GR+S+   QP GQAP++     L+   RT     NG  I  + + PR L  +EIP IVNDFR A  NA EAGFD +ELH AHG+L+
Sbjct:    6 LYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRAS-AGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAPVA--PSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVNDFRQAIANAREAGFDLVELHSAHGYLL 189          
BLAST of FC872204 vs. ExPASy Swiss-Prot
Match: OYE3_YEAST (NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae GN=OYE3 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 64/186 (34.41%), Postives = 96/186 (51.61%), Query Frame = 1
Query:  136 LVTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPH-AILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKP--LTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLID 675
            L  P  +G+  L+HR V+ PLTR R+ +  N+P    A +YY QR  + G ++I E T +S  A GY + PGIW+ EQV  WK I  A+H      + Q+  +G  S  D          C      +   ++    D         LT D+I Q + D+  AA+N+I AG DG+E+H A+G+L++
Sbjct:   17 LFEPIKIGNTQLAHRAVMPPLTRMRATHPGNIPNKEWAAVYYGQRAQRPGTMIITEGTFISPQAGGYDNAPGIWSDEQVAEWKNIFLAIHDCQSFAWVQLWSLGWASFPDVLARDGLRYDCASDRVYMNATLQEKAKDANNL--EHSLTKDDIKQYIKDYIHAAKNSIAAGADGVEIHSANGYLLN 200          
The following BLAST results are available for this feature:
BLAST of FC872204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
OPR2_ARATH2.485e-8779.7912-oxophytodienoate reductase 2 OS=Arabidopsis tha... [more]
OPR1_ARATH5.536e-8780.7512-oxophytodienoate reductase 1 OS=Arabidopsis tha... [more]
OPR1_SOLLC1.508e-8478.1912-oxophytodienoate reductase 1 OS=Solanum lycoper... [more]
OPRL2_ARATH6.569e-7269.68Putative 12-oxophytodienoate reductase-like protei... [more]
OPRL1_ARATH1.978e-6867.04Putative 12-oxophytodienoate reductase-like protei... [more]
OPR3_SOLLC5.053e-5656.7712-oxophytodienoate reductase 3 OS=Solanum lycoper... [more]
OPR3_ARATH1.987e-5254.5012-oxophytodienoate reductase 3 OS=Arabidopsis tha... [more]
OPRL_SOLLC1.168e-4450.5312-oxophytodienoate reductase-like protein OS=Sola... [more]
NEMA_ECOLI1.869e-3444.92N-ethylmaleimide reductase OS=Escherichia coli (st... [more]
OYE3_YEAST3.655e-2234.41NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae ... [more]

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Properties
Property NameValue
Genbank descriptionC05701G08SK AbsCOv1 Citrus clementina cDNA clone C05701G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872204 ID=FC872204; Name=FC872204; organism=Citrus clementina; type=EST; length=701bp
ATTTTATTTTCAGTCGCGTTAAGGATTCTCAATTTGCTTGTAATTCTACT
AAACATGGGAAACAGAGCAGAGGAGGCTAAGCAAAATCAAGAAGAGAACA
ACGGTAACATGGCCATTGAAACTCCCATCATCCCTCTTGTCACTCCTTAC
AATATGGGCAGTCTCAATCTTTCTCATAGAGTTGTTTTAGCACCACTGAC
TAGACAGAGATCATACAACAATGTTCCTCAGCCACATGCCATTTTGTATT
ACTCTCAAAGAACCACCAAAGGGGGTTTGCTTATAGCCGAAGCCACTGGA
GTTTCCGACACTGCTCAAGGGTATCCAGATACACCTGGTATCTGGACAAA
GGAGCAAGTTGAAGCATGGAAACCGATTGTAGATGCTGTTCATGCCAAAG
GTGGGATCTTCTTTTGTCAGATTGGGCACGTTGGCAGGGTTTCAAATCAA
GATTATCAGCCAAATGGTCAAGCTCCAATTTCCTGTACAGACAAGCCATT
GACACCTCAAATCCGCACTAATGGTGTTGATATTGCACAATTCACTCCTC
CAAGGCGGCTAACGACAGATGAAATCCCTCAAATTGTGAATGATTTCAGG
CTTGCTGCAAGAAATGCAATTGAGGCTGGTTTCGATGGCATTGAGCTCCA
CGGTGCACATGGCTTCCTAATTGACCATTTATGAAAGGATCAGTGAATGA
T
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