FC872213

Overview
NameFC872213
Unique NameFC872213
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX1_ARATH (Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.189e-104
Identity = 172/221 (77.83%), Postives = 189/221 (85.52%), Query Frame = 1
Query:   73 DSNDNELEQLQDGGE----------GFTVPETNSFGQTFRDYGVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENKT 705
            D+ D  +E+ Q  G+          GF  P TNSFG+TFRDY  ESER++GVE FYR  HI QT DFV++MREEY KLNR EMSIWECCELLNEF+DESDPDLDEPQIEHLLQTAEAIRKDYP+EDWLHLTGLIHDLGKVLLH  FGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDY+NP++N+KYG Y+EG GLDNVLMSWGHDDYMYLVAKEN+T
Sbjct:   13 DAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYDNPSYNSKYGIYTEGCGLDNVLMSWGHDDYMYLVAKENQT 233          

HSP 2 Score: 32.3426 bits (72), Expect = 1.189e-104
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  705 TLPSAGLFIIRYHS 746
            TLPSAGLFIIRYHS
Sbjct:  234 TLPSAGLFIIRYHS 247          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_ORYSJ (Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 1.573e-98
Identity = 162/208 (77.88%), Postives = 180/208 (86.54%), Query Frame = 1
Query:   82 DNELEQLQDGGEGFTVPETNSFGQTFRDYGVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENKT 705
            DN  E + DGG  F VP++N+FG  FR+Y  ESER++ VE FYR  HINQT DFV+RMREEYG++++ EM IWEC ELLNEF+D+SDPDLD PQIEHLLQTAEAIRKD+P+EDWLHLTGLIHDLGKVLLHP FGELPQW+VVGDTFPVGCAFDE  VH KYFKENPDY NP  NTK+GAYSEG GLDNVLMSWGHDDYMYLVAKENKT
Sbjct:   25 DNAAELVLDGG--FVVPDSNAFGNAFRNYEAESERKETVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGDTFPVGCAFDECNVHFKYFKENPDYLNPKLNTKFGAYSEGCGLDNVLMSWGHDDYMYLVAKENKT 230          

HSP 2 Score: 32.3426 bits (72), Expect = 1.573e-98
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3
Query:  705 TLPSAGLFIIRYHS 746
            TLPSAGLFIIRYHS
Sbjct:  231 TLPSAGLFIIRYHS 244          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX4_ARATH (Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 9.292e-96
Identity = 164/228 (71.93%), Postives = 181/228 (79.39%), Query Frame = 1
Query:   49 WHRMAVLADSNDNELEQLQDGG-----------EGFTVPETNSFGQTFRDYGVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKEN 699
            +  ++    S DN  E   DGG           E F  PE N+FG+ FRDY VESERQKGVE FYR QHINQT DFVK+MR EYGKL+++ MSIWECCELLNE VDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHLT LIHDLGKV+  P FG LPQWAVVGDTFPVGCAFDES VHHKYF ENPD++N  +NTK G YSEG GL+NV+MSWGHDDYMYLVAKEN
Sbjct:   10 FEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDYDVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFVENPDFHNETYNTKNGIYSEGCGLNNVMMSWGHDDYMYLVAKEN 237          

HSP 2 Score: 30.0314 bits (66), Expect = 9.292e-96
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  705 TLPSAGLFIIRYHS 746
            TLPSAG FIIRYHS
Sbjct:  240 TLPSAGQFIIRYHS 253          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX5_ARATH (Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 3.528e-92
Identity = 155/215 (72.09%), Postives = 173/215 (80.47%), Query Frame = 1
Query:   79 NDNELEQLQDGGEGFTVPETNSFGQTFRDY-GVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENKTLCRQP 720
            +D  + ++    E F  PE N+FG+ FRDY    SERQK VE FY TQH NQT DFV++MR EYGKL+++ M+IWECCEL  E VDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHLT LIHDLGKVL  P FG LPQWAVVGDTFPVGCAFDES VHHKYF ENPD+NNP +NTK G YSEG GL+NVLMSWGHDDYMYLVAKEN +    P
Sbjct:   27 SDIPMSKISSDDEVFLAPEMNAFGRQFRDYTDTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWAVVGDTFPVGCAFDESNVHHKYFMENPDFNNPKYNTKAGIYSEGCGLENVLMSWGHDDYMYLVAKENGSTLPSP 241          

HSP 2 Score: 30.4166 bits (67), Expect = 3.528e-92
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  705 TLPSAGLFIIRYHS 746
            TLPS GLFIIRYHS
Sbjct:  237 TLPSPGLFIIRYHS 250          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX2_ARATH (Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 1.022e-91
Identity = 158/221 (71.49%), Postives = 178/221 (80.54%), Query Frame = 1
Query:   73 DSNDNELEQLQDGG---------EGFTVPETNSFGQTFRDY-GVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENKT 705
            +  DNEL  + DGG         + F  P+ N  G +FRDY   ESERQ+GVE FYR QHI+QT DFVK+MR+EYGKLN++EMSIWECCELLN  VDESDPDLDEPQI+HLLQTAEAIR+DYP+EDWLHLT LIHDLGKVLL P+FG LPQWAVVGDTFPVGC FD + +HHKYFK N D NNP +NTK G Y+EG GLDNVLMSWGHDDYMYLVAK+N T
Sbjct:   21 EERDNEL--VLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGDTFPVGCTFDSANIHHKYFKGNHDINNPKYNTKNGVYTEGCGLDNVLMSWGHDDYMYLVAKKNGT 239          

HSP 2 Score: 30.4166 bits (67), Expect = 1.022e-91
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3
Query:  705 TLPSAGLFIIRYHS 746
            TLP AGLFIIRYHS
Sbjct:  240 TLPHAGLFIIRYHS 253          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_DICDI (Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.014e-53
Identity = 101/189 (53.44%), Postives = 128/189 (67.72%), Query Frame = 1
Query:  151 QTFRDYGVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNR-VEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNE--DWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENKTL 708
            + FR+Y    +R   V   YR  H  QT D+    +++Y +L+  ++M +WE  ELLN  +DESDPD + PQI H LQTAEAIRK YP+   DW HLTG IHDLGKVLL   F E PQWA VGDTFP+GC FDES + +++FK NPDYN+  +N++ G Y +  GL+NV MSWGHD+Y YLV   NK L
Sbjct:   30 EEFRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTSIKMGLWEAAELLNTIIDESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLGKVLLSKKFKEQPQWATVGDTFPLGCKFDESNIFYEFFKMNPDYNDSKYNSECGIYKKNIGLENVTMSWGHDEYFYLVCVGNKCL 215          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_MOUSE (Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.153e-44
Identity = 92/192 (47.92%), Postives = 122/192 (63.54%), Query Frame = 1
Query:  130 PETNSFGQTFRDYGVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENK 702
            PE      +FR+Y         V   Y+  H +QT DFV R R +YG  +  +M+I E   +L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK++    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+NVLMSWGHD+Y+Y + K NK
Sbjct:   19 PEMAKSKDSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNK 206          

HSP 2 Score: 21.1718 bits (43), Expect = 4.153e-44
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  705 TLPSAGLFIIRYHS 746
            +LPS   ++IR+HS
Sbjct:  208 SLPSEAFYMIRFHS 221          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_HUMAN (Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.492e-44
Identity = 94/192 (48.96%), Postives = 120/192 (62.50%), Query Frame = 1
Query:  130 PETNSFGQTFRDYGVESERQKGVEGFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENK 702
            PE      +FR+Y         V   Y+  H +QT DFV+    ++G  +  +M++ E  +LL+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL    FGE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GLD VLMSWGHD+YMY V K NK
Sbjct:   19 PEVAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL--FGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNK 206          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_DANRE (Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.056e-44
Identity = 85/167 (50.90%), Postives = 113/167 (67.66%), Query Frame = 1
Query:  208 YRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVL-LHPDFGELPQWAVVGDTFPVGCAFDESIV-HHKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENK 702
            Y+  H +QT DFVK+  + +   +   +S+ +  + L+E VDESDPD+D P   H  QTAE IR+++P++DW  L GLIHD+GKV+ L+ +    PQWAVVGDT+PVGC F  SIV  +  F+ NPD  NPA NT++G Y    GLD VLMSWGHD+Y+Y V K NK
Sbjct:   37 YKLMHTHQTLDFVKQKHQVWSNCSHFSLSMMDSIDSLDELVDESDPDVDFPNSFHAFQTAEGIRREHPDKDWFQLVGLIHDVGKVMALYSE----PQWAVVGDTYPVGCKFQNSIVFRNSTFEGNPDGKNPAPNTEFGIYEPQCGLDKVLMSWGHDEYLYRVMKFNK 199          

HSP 2 Score: 24.2534 bits (51), Expect = 7.056e-44
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  705 TLPSAGLFIIRYHS 746
            T+P  GL++IR+HS
Sbjct:  201 TIPEEGLYMIRFHS 214          
BLAST of FC872213 vs. ExPASy Swiss-Prot
Match: MIOX_RAT (Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 8.479e-44
Identity = 85/166 (51.20%), Postives = 115/166 (69.28%), Query Frame = 1
Query:  208 YRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKYGAYSEGRGLDNVLMSWGHDDYMYLVAKENK 702
            Y+  H +QT DFV R R ++G  +  +M++ E  ++L++ VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGK+L    +GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL+NVLMSWGHD+Y+Y + K NK
Sbjct:   44 YKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL--WGE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNK 206          
The following BLAST results are available for this feature:
BLAST of FC872213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX1_ARATH1.189e-10477.83Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_ORYSJ1.573e-9877.88Probable inositol oxygenase OS=Oryza sativa subsp.... [more]
MIOX4_ARATH9.292e-9671.93Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MI... [more]
MIOX5_ARATH3.528e-9272.09Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MI... [more]
MIOX2_ARATH1.022e-9171.49Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MI... [more]
MIOX_DICDI2.014e-5353.44Inositol oxygenase OS=Dictyostelium discoideum GN=... [more]
MIOX_MOUSE4.153e-4447.92Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV... [more]
MIOX_HUMAN6.492e-4448.96Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV... [more]
MIOX_DANRE7.056e-4450.90Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=... [more]
MIOX_RAT8.479e-4451.20Inositol oxygenase OS=Rattus norvegicus GN=Miox PE... [more]

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Properties
Property NameValue
Genbank descriptionC05701H06SK AbsCOv1 Citrus clementina cDNA clone C05701H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872213 ID=FC872213; Name=FC872213; organism=Citrus clementina; type=EST; length=748bp
CGGCCGGGCTCACACAAGAAGGAGAAGGAGAATCCCTTCCTCTGCAATTG
GCACAGGATGGCTGTTCTCGCTGATTCAAATGACAACGAATTGGAGCAGC
TGCAGGATGGAGGAGAAGGATTCACGGTGCCTGAGACTAATTCGTTTGGT
CAAACTTTCAGGGATTATGGTGTTGAAAGTGAGCGGCAAAAGGGCGTGGA
GGGATTCTATAGAACTCAACATATTAATCAGACCTGTGACTTTGTGAAAA
GGATGAGAGAAGAGTATGGAAAACTGAATAGGGTGGAAATGAGTATATGG
GAATGCTGTGAGCTACTAAATGAATTTGTTGATGAGAGTGATCCCGACCT
TGATGAGCCTCAAATTGAGCACTTGCTGCAGACAGCCGAGGCCATTAGGA
AGGACTATCCTAATGAGGATTGGCTACATTTGACCGGTCTCATCCATGAT
CTTGGAAAGGTTCTTCTTCATCCTGATTTTGGGGAACTTCCTCAGTGGGC
TGTTGTTGGTGACACATTCCCCGTTGGTTGTGCCTTTGATGAATCAATTG
TTCACCACAAGTATTTTAAGGAGAATCCAGACTACAACAATCCTGCTTTT
AACACCAAATATGGAGCTTATTCAGAAGGCCGTGGATTAGACAATGTGTT
GATGTCATGGGGCCATGATGACTACATGTACTTGGTAGCTAAGGAGAATA
AGACACTCTGCCGTCAGCCGGNCTTTTCATAATCAGATACCATTCTTT
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