FC872218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.429e-26 Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 1 Query: 199 HACSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 + C+GVRSLN AA+TT DRQAACNCLK A+ +I+G+ N+AAGLP +CGV +PYKISPSTDC V+ Sbjct: 26 NCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91 HSP 2 Score: 38.891 bits (89), Expect = 2.429e-26 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 3 Query: 120 ITCGQVTASLAPCIPFLRTGG 182 ITCGQV++SLAPCI +LR GG Sbjct: 1 ITCGQVSSSLAPCINYLRAGG 21
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.976e-26 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 C+G+R++N ARTTPDRQAACNCLK+ ++ G+ PN AA LP +CGV IPY+ISPST+C+ V+ Sbjct: 54 CNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117 HSP 2 Score: 44.669 bits (104), Expect = 6.976e-26 Identity = 17/26 (65.38%), Postives = 23/26 (88.46%), Query Frame = 3 Query: 105 PVTNAITCGQVTASLAPCIPFLRTGG 182 P+ AITCGQV+++LAPCIP++R GG Sbjct: 22 PIAQAITCGQVSSNLAPCIPYVRGGG 47
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 9.082e-26 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 CSGV+SLN AA+TTPDRQAAC CLK AY +I G+ AA P +CGV IPYKISPSTDCS+V+ Sbjct: 53 CSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116 HSP 2 Score: 40.0466 bits (92), Expect = 9.082e-26 Identity = 16/26 (61.54%), Postives = 21/26 (80.77%), Query Frame = 3 Query: 105 PVTNAITCGQVTASLAPCIPFLRTGG 182 P T A++CGQV++SLAPCI +L GG Sbjct: 21 PYTEALSCGQVSSSLAPCISYLTKGG 46
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.182e-25 Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 C+G+R++NG ARTT DRQ ACNCLK G+I G+ PN AAGLP +CGV +PYKIS ST+C+ V+ Sbjct: 52 CNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115 HSP 2 Score: 43.1282 bits (100), Expect = 1.182e-25 Identity = 18/25 (72.00%), Postives = 23/25 (92.00%), Query Frame = 3 Query: 108 VTNAITCGQVTASLAPCIPFLRTGG 182 V +AITCGQVT+SLAPCI ++R+GG Sbjct: 21 VAHAITCGQVTSSLAPCIGYVRSGG 45
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.045e-23 Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 C+G+R++N ARTTPDRQAACNCLK+ ++ G+ PN AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 28 CNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91 HSP 2 Score: 39.2762 bits (90), Expect = 1.045e-23 Identity = 15/21 (71.43%), Postives = 20/21 (95.24%), Query Frame = 3 Query: 120 ITCGQVTASLAPCIPFLRTGG 182 ITCGQV+++LAPCIP++R GG Sbjct: 1 ITCGQVSSALAPCIPYVRGGG 21
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.305e-23 Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 C GV++L +ARTT DRQ AC CLK A G I GI AAGLPS CGV IPYKISPSTDCS+V+ Sbjct: 51 CGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114 HSP 2 Score: 39.6614 bits (91), Expect = 2.305e-23 Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 3 Query: 105 PVTNAITCGQVTASLAPCIPFLRTGG 182 P AITCGQVT++LAPC+ +LR G Sbjct: 20 PCAEAITCGQVTSNLAPCLAYLRNTG 45
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.904e-23 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 C+G++++NG A+TTPDRQAACNCLK G++ G+ P A LP +CGV +PYKIS ST+C+ V+ Sbjct: 52 CNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115 HSP 2 Score: 39.2762 bits (90), Expect = 3.904e-23 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 3 Query: 108 VTNAITCGQVTASLAPCIPFLRTGG 182 V +AITC QV+A+LAPCI ++R+GG Sbjct: 21 VAHAITCSQVSANLAPCINYVRSGG 45
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 5.081e-23 Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 C+G+R++N ARTTPDR+ ACNCLK+ G+I G+ PN AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 28 CNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91 HSP 2 Score: 36.965 bits (84), Expect = 5.081e-23 Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 3 Query: 120 ITCGQVTASLAPCIPFLRTGG 182 ITCGQV++SLAPCI ++R GG Sbjct: 1 ITCGQVSSSLAPCIGYVRGGG 21
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.897e-22 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 C+G+R++N A+TT DRQ ACNCLK+ ++ G+ N AA LP +CGV +PYKISPST+C+ V+ Sbjct: 54 CNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117 HSP 2 Score: 40.817 bits (94), Expect = 1.897e-22 Identity = 15/26 (57.69%), Postives = 22/26 (84.62%), Query Frame = 3 Query: 105 PVTNAITCGQVTASLAPCIPFLRTGG 182 P+ A+TCGQV+++LAPCI ++R GG Sbjct: 22 PIAQALTCGQVSSNLAPCIAYVRGGG 47
BLAST of FC872218 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.440e-22 Identity = 40/64 (62.50%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 205 CSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396 C GV++L G+A+TT DR+ AC CLK A I+GI N AAG+PS C V IPYKISPSTDCS V+ Sbjct: 51 CGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114 HSP 2 Score: 39.6614 bits (91), Expect = 5.440e-22 Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 3 Query: 105 PVTNAITCGQVTASLAPCIPFLRTGG 182 P A+TCGQVTA LAPC+P+L+ G Sbjct: 20 PHAEALTCGQVTAGLAPCLPYLQGRG 45 The following BLAST results are available for this feature:
BLAST of FC872218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872218 ID=FC872218; Name=FC872218; organism=Citrus clementina; type=EST; length=638bpback to top |