FC872225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872225 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.733e-14 Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 337 LSL*KMEGNFDGEKPKKDLEGMMDLNNHHGHLKTASSDQNHKDILLQIKSSKIPAVINYGASWCGVCNQILPAFCKLSNNFPKLSFIYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 729 L L K + D ++P +L G G++ ++ + L + + N+ A WCG C QI P + +LS N+P L F+ D+DE + + I+ TPTF F RDG++VD++ GA + LH ++ Sbjct: 3 LCLAKRNHDADDDEPHIELAG--------GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127
BLAST of FC872225 vs. ExPASy Swiss-Prot
Match: THIO1_DICDI (Thioredoxin-1 OS=Dictyostelium discoideum GN=trxA PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11 Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 1 Query: 502 VINYGASWCGVCNQILPAFCKLSNNFPKLSFIYADIDE--CPETTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 729 V+++ A WCG C I P F KLSN F +F++ DID+ I+ PTFHFYR+G +V E GA E L L Sbjct: 24 VVDFSAVWCGPCRAISPVFEKLSNEFITFTFLHVDIDKLNVHPIVSKIKSVPTFHFYRNGSKVSEFSGASESILRSTL 101
BLAST of FC872225 vs. ExPASy Swiss-Prot
Match: THIO3_DICDI (Thioredoxin-3 OS=Dictyostelium discoideum GN=trxC PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 1 Query: 502 VINYGASWCGVCNQILPAFCKLSNNFPKLSFIYADIDE--CPETTQHIRYTPTFHFYRDGERVDEMFGAGEERLHDRL 729 V+++ A WCG C I P F KLSN F +F++ DID+ + IR PTF+FY +G +V E GA E L L Sbjct: 23 VVDFSAEWCGPCRAIAPVFDKLSNEFTTFTFVHVDIDKVNTHPIVKEIRSVPTFYFYVNGAKVSEFSGANEATLRSTL 100
BLAST of FC872225 vs. ExPASy Swiss-Prot
Match: THIO_ICTPU (Thioredoxin OS=Ictalurus punctatus GN=txn PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11 Identity = 30/83 (36.14%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 502 VINYGASWCGVCNQILPAFCKLSNN--FPKLSFIYADIDECPETTQH--IRYTPTFHFYRDGERVDEMFGAGEERLHDRLWSH 738 V+++ A+WCG C +I P F LS + + + F+ D+D+ + + H I+ PTFHFY++G+++DE GA E+ L ++ H Sbjct: 24 VVDFTATWCGPCQKIGPIFETLSKSEDYQNVVFLKVDVDDAADVSSHCDIKCMPTFHFYKNGQKIDEFSGANEQTLKQKINDH 106 The following BLAST results are available for this feature:
BLAST of FC872225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872225 ID=FC872225; Name=FC872225; organism=Citrus clementina; type=EST; length=863bpback to top |