FC872232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 382.104 bits (980), Expect = 1.615e-108 Identity = 191/240 (79.58%), Postives = 213/240 (88.75%), Query Frame = 1 Query: 91 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN*WQGKCS 810 MVKGPGLYS+IGKKARDLLY+DY SDHKFTVTTY++ GVAIT+SG+KKGELFLADVSTQLKNKNITTDVKVDTNSN++TTITVDEPAPGLK+IFSF+VPDQ+SGKVELQY HEYAGI+T IG TA+P+ ALGTDLSFDTATGNFTKC+AGLS++ DLIASL LNDKGDT++ASYYH V P+TNTAVGAELTHSFSSNENTLTIGTQH LDPLT+VKARVN+ GK S Sbjct: 1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNS--YGKAS 238 HSP 2 Score: 31.187 bits (69), Expect = 1.615e-108 Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2 Query: 794 GRASALIQHEWRP 832 G+ASALIQHEWRP Sbjct: 235 GKASALIQHEWRP 247
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 359.377 bits (921), Expect = 1.797e-101 Identity = 174/233 (74.68%), Postives = 200/233 (85.84%), Query Frame = 1 Query: 91 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN 789 M KGPGLY+EIGKKARDLLYKDYQSDHKF++TTY+ GV ITSSG KKG+LFLADV+TQLKNKN+TTD+KVDTNSNLFTTITVDE APGLK+I SF VPDQRSGK+E+QY H+YAGI T +G TANPI ALGTD+SFDT TG+FTKC+AGLS+T+ DL+ASL LN+KGD L ASYYH VSPLT+TAVGAE+ HSFS+NEN +T+GTQH LDPLTSVKAR+NN Sbjct: 1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINN 233 HSP 2 Score: 30.4166 bits (67), Expect = 1.797e-101 Identity = 11/13 (84.62%), Postives = 13/13 (100.00%), Query Frame = 2 Query: 794 GRASALIQHEWRP 832 G+ASAL+QHEWRP Sbjct: 235 GKASALLQHEWRP 247
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 328.561 bits (841), Expect = 3.709e-93 Identity = 162/240 (67.50%), Postives = 191/240 (79.58%), Query Frame = 1 Query: 91 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN*WQGKCS 810 MVKGPGLY++IGKKARDLLYKDY SD KFT++TY+ GVAITSSG KKGELFL DV+TQLKNKNITTD+KVDTNSNLFTTITV+EPAPG+K+I SF VP+Q SGKVELQY HEYAGIS+ +G ANPI A G D+SFDT G TK +A +++ DLI SLTLN+KGD L+ASYYH ++PL+NTAVG +++H FS+ ENT T+GTQHALDPLT+VK RV N GK S Sbjct: 1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTN--SGKAS 238 HSP 2 Score: 33.4982 bits (75), Expect = 3.709e-93 Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 785 TTNGRASALIQHEWRP 832 T +G+ASALIQHEWRP Sbjct: 232 TNSGKASALIQHEWRP 247
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 321.627 bits (823), Expect = 1.836e-89 Identity = 160/233 (68.67%), Postives = 189/233 (81.12%), Query Frame = 1 Query: 91 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN 789 MVKGPGLY+EIGKKARDLLYKD+ SD KF++TT++ AGVAITS+G KKG+L L DV+ Q + KNITTD+KV T+S T TVDE APGL+SIFSF VPDQ SGKVELQY HEYAGIST +G T NP A+GTD+SFDT +GNFTK +AGLS+T DLIASLT+NDKGD LNASYYHIV+PL NTAVGAE++H SS ++T+T+GTQH+LDPLTSVKARVN+ Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNS 233 HSP 2 Score: 28.1054 bits (61), Expect = 1.836e-89 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 794 GRASALIQHEWRP 832 G ASALIQHEW+P Sbjct: 235 GIASALIQHEWKP 247
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 309.301 bits (791), Expect = 1.411e-86 Identity = 156/237 (65.82%), Postives = 186/237 (78.48%), Query Frame = 1 Query: 100 GPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN*WQGKCS 810 GPGLY EIGKKARDLLY+DYQ+DHKFT+TTYTS GVAIT++ KK +L ++ +Q+KNKNIT DVK +++SN+ TT+TVDE PGLKSI SF VPDQRSGK ELQY H+YAG+S IG TA+P+ A+G D+S DTATGN TK +AGLS+++ DLIASL LN+KGD+L ASYYHIV+ + TAVGAELTHSFSSNEN+LT GTQH LDPLT VKAR NN GK S Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNH-SATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNN--SGKAS 236 HSP 2 Score: 30.8018 bits (68), Expect = 1.411e-86 Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2 Query: 791 NGRASALIQHEWRP 832 +G+ASAL+QHEWRP Sbjct: 232 SGKASALLQHEWRP 245
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 300.056 bits (767), Expect = 5.341e-83 Identity = 147/233 (63.09%), Postives = 182/233 (78.11%), Query Frame = 1 Query: 91 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN 789 MVKGPGLY+EIGKKARDLLY+DYQ D KF+VTTY+S GVAIT++G KG LFL DV+TQ+KN N T DVKV T+S+L TT+T DEPAPGLK I +PD +SGK E+QY H+YAGIST +GFTA PI +LGTD++++T +GNF +AG ++T DL ASL LNDKG+ LNASYY IVSP +T VGAE++H+F++ EN +T+GTQHALDPLT+VKARVNN Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNN 231 HSP 2 Score: 28.1054 bits (61), Expect = 5.341e-83 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 794 GRASALIQHEWRP 832 G A+ALIQHEWRP Sbjct: 233 GVANALIQHEWRP 245
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 9.932e-82 Identity = 153/238 (64.29%), Postives = 184/238 (77.31%), Query Frame = 1 Query: 100 GPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDE-PAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN*WQGKCS 810 GPGLYS IGKKA+DLLY+DYQ+DHKFT+TTYT+ G AIT++ KK +L + ++ +Q+KNKNIT DVK ++ SN+ TTIT D+ APGLK+I SF VPDQ+SGKVELQY H+YAGI+ IG TANP+ A+G D+S DTAT NF K +A LSYT+ DLIASL LN+KGD+L ASYYHIV + TAVGAELTHSFSSNEN+LT GTQH LDPLT VKAR+NN GK S Sbjct: 3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEK-SGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINN--SGKAS 237 HSP 2 Score: 25.409 bits (54), Expect = 9.932e-82 Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 2 Query: 791 NGRASALIQHEWRP 832 +G+ASALIQHE+ P Sbjct: 233 SGKASALIQHEFMP 246
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 6.937e-71 Identity = 130/234 (55.56%), Postives = 167/234 (71.37%), Query Frame = 1 Query: 91 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDE-PAPGLKSIFSFIVPDQRSGKVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN 789 MV GLY++IGKK RDLLYKDY + KF +TT + GVAIT++G +K E ++ TQ+KNK +T DVK ++ S+L TTITVDE PGLKSI + +VPDQRSGK+E QY HEYAG++ +G +NP+ ++G D+SFDTAT +FTK +A LS T DLIASL LN+ GDTL ASYYH+V + TAVGAEL+HS S NE+TL G+QH+LDP T++K R NN Sbjct: 1 MVVAVGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNN 234 HSP 2 Score: 29.6462 bits (65), Expect = 6.937e-71 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 794 GRASALIQHEWRP 832 G ASAL+QHEWRP Sbjct: 236 GMASALVQHEWRP 248
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC2_XENLA (Voltage-dependent anion-selective channel protein 2 OS=Xenopus laevis GN=vdac2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.215e-14 Identity = 69/239 (28.87%), Postives = 104/239 (43.51%), Query Frame = 1 Query: 103 PGLYSEIGKKARDLLYKDYQSD-HKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNK----NITTDVKVDTNSNLFTTITV-DEPAPGLKSIFSFIV---PDQRSGKVELQYQHEYAGISTGIGFT-ANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN 789 P Y+++GK ARD+ K Y K V T ++ GV T+SG + + S + K K +T K +T++ L T I + D+ A GLK F ++SGKV+ Y+ EY + + F A P G ++FD+A TK + + Y D +ND G S Y VS TAV L + +N I ++ LD ++ A+VNN Sbjct: 3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKYKWGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKVKAAYKQEYVNLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHTNVND-GSEFAGSIYQKVSDKMETAV--NLAWTSGNNSTRFGIAAKYQLDSHAAISAKVNN 238
BLAST of FC872232 vs. ExPASy Swiss-Prot
Match: VDAC_DROME (Voltage-dependent anion-selective channel OS=Drosophila melanogaster GN=porin PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 3.779e-14 Identity = 65/239 (27.20%), Postives = 111/239 (46.44%), Query Frame = 1 Query: 103 PGLYSEIGKKARDLLYKDYQSD-HKFTVTTYTSAGVAITSSG---VKKGELF-LADVSTQLKNKNITTDVKVDTNSNLFTTITV-DEPAPGLK-SIFSFIVPD--QRSGKVELQYQHEYAGISTGIGF-TANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCSAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNN 789 P YS++GK+ARD+ K Y K + T TS+G+ ++G + G++F + ++K+ +T K +T++ LFT + V D+ GLK S+ P ++GK ++ Y HE + + P+ G +FDT T + L YT D + +ND G + S + S + VG +L+ + ++ IG ++ LD SV+A+VNN Sbjct: 3 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVND-GQEFSGSIFQRTSDKLD--VGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNN 238 The following BLAST results are available for this feature:
BLAST of FC872232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872232 ID=FC872232; Name=FC872232; organism=Citrus clementina; type=EST; length=834bpback to top |