FC872303

Overview
NameFC872303
Unique NameFC872303
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length895
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: NT5D_DICDI (5'-nucleotidase domain-containing protein DDB_G0275467 OS=Dictyostelium discoideum GN=DDB_G0275467 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.484e-35
Identity = 85/213 (39.91%), Postives = 121/213 (56.81%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPS-KAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLYPPEAWLHVPFDIKIMPHHVKV 640
            +I + +KP F+    PFR Y  + D   + +V+ F P K+Y  G LK F  ++KW G  V+YFGDHL+SDL  PS K GW+T  II ELE E+ IQN   YR + A+   +++++ K           E  +L L +L  ER K R  +K+ FN +FG+ F T T   + FA  + R+AD+YTSK EN + YP  A L +P     +PH  K+
Sbjct:  386 IITKCDKPSFFGKGRPFRMYHPDSDRYDWNEVNHFEPKKVYVGGSLKQFTNVSKWRGRSVMYFGDHLYSDLVEPSQKEGWKTGVIIKELEVEVGIQNSPKYREQLAELLQLEDVIRKCQFFSG-----EKKELFLEQLKTERYKKRLALKEPFNANFGSLFRTHT-NATIFASSLQRHADIYTSKIENLISYPLTASL-IP-SRNYLPHEFKL 590          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: NT5D3_MOUSE (5'-nucleotidase domain-containing protein 3 OS=Mus musculus GN=Nt5dc3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.259e-26
Identity = 75/193 (38.86%), Postives = 102/193 (52.85%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDH-PFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPS-KAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLY 577
            VI QA KP+F+     PFR  + EK  L + K+      +IY  G L  FL++T W G +V+YFGDH++SDL   + K GWRT AII EL SE+RI N E Y         +  LL ++        R    QL+L E  +ER++ R M K  FN  FG+ F TD    + F   + R+AD+Y +     L Y
Sbjct:  323 VIVQAEKPNFFNDKRRPFRKVN-EKGVLLWDKIHKLQKGQIYKQGNLYEFLKLTGWRGSKVLYFGDHIYSDLADLTLKHGWRTGAIIPELRSELRIMNTEQYIQTMTWLQTLTGLLEQMQV-----HRDAESQLVLQEWKKERKEMREMTKSFFNAQFGSLFRTDQ-NPTYFLRRLSRFADIYMASLSCLLNY 508          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: NT5D3_HUMAN (5'-nucleotidase domain-containing protein 3 OS=Homo sapiens GN=NT5DC3 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.663e-26
Identity = 74/193 (38.34%), Postives = 101/193 (52.33%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDH-PFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPS-KAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLY 577
            VI QA KP+F+     PFR  + EK  L + K+      +IY  G L  FL++T W G  V+YFGDH++SDL   + K GWRT AII EL SE++I N E Y         +  LL ++        R    QL+L E  +ER++ R M K  FN  FG+ F TD    + F   + R+AD+Y +     L Y
Sbjct:  325 VIVQAEKPNFFNDKRRPFRKMN-EKGVLLWDKIHKLQKGQIYKQGNLYEFLKLTGWRGSRVLYFGDHIYSDLADLTLKHGWRTGAIIPELRSELKIMNTEQYIQTMTWLQTLTGLLEQMQV-----HRDAESQLVLQEWKKERKEMREMTKSFFNAQFGSLFRTDQ-NPTYFLRRLSRFADIYMASLSCLLNY 510          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: NT5D2_HUMAN (5'-nucleotidase domain-containing protein 2 OS=Homo sapiens GN=NT5DC2 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.375e-25
Identity = 78/193 (40.41%), Postives = 107/193 (55.44%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDH-PFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRG-PSKAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLY 577
            VI QA+KP F+T    PFR  D EK +L + ++      KIY  G L  FL++T+W GP V+YFGDHL+SDL     + GWRT AII ELE EIRI N E Y          Q+ L  L   +   Q  E+ Q+L A + +ERQ+ R + K +FN  FG+ F T     + F+  + R++D+Y +     L Y
Sbjct:  294 VIVQADKPSFFTDRRKPFRKLD-EKGSLQWDRITRLEKGKIYRQGNLFDFLRLTEWRGPRVLYFGDHLYSDLADLMLRHGWRTGAIIPELEREIRIINTEQYMHSLT----WQQALTGLLERMQTYQDAESRQVLAAWM-KERQELRCITKALFNAQFGSIFRT-FHNPTYFSRRLVRFSDLYMASLSCLLNY 479          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: NT5D3_XENLA (5'-nucleotidase domain-containing protein 3 OS=Xenopus laevis GN=nt5dc3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.290e-25
Identity = 78/215 (36.28%), Postives = 111/215 (51.63%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDH-PFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPS-KAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLYPPEAWLHVPFDIKIMPHHVKVP 643
            VI QA+KP+F+     PFR    E+  L + K+      + Y  G L  FL++T W G +V+YFGDH++SDL   + K GWRT AII EL+SEI I N   Y    A    +  LL ++        R    Q++L +  +ERQ+ R + K MFN+ FG+ F TD    + F   + R+AD+Y     + L Y     LH  F  K  P   ++P
Sbjct:  273 VIVQADKPNFFNDKRRPFRKV-AERGILLWDKIHHLEKGQTYKQGNLFEFLKLTGWRGSKVLYFGDHIYSDLADLTLKHGWRTGAIIPELKSEIEIMNTSHYIKTMAWLQGLTGLLERMQV-----YRDAESQMVLQDWIKERQETRDLTKTMFNRQFGSIFRTD-HNPTYFLRRLSRFADIYMESLSSLLNYD----LHHTFYPKRTPLQHELP 476          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: NT5D2_RAT (5'-nucleotidase domain-containing protein 2 OS=Rattus norvegicus GN=Nt5dc2 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.290e-25
Identity = 78/193 (40.41%), Postives = 107/193 (55.44%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDH-PFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRG-PSKAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLY 577
            VI QA+KP+F+T    PFR  D EK +L + ++      KIY  G L  FL++T+W GP V+YFGDHL+SDL     + GWRT AII ELE EIRI N E Y          Q+ L  L   +   Q  E+ Q +LA   +ERQ+ R + K +FN  FG+ F T     + F+  + R++D+Y +     L Y
Sbjct:  327 VIVQADKPNFFTDRRKPFRKLD-EKGSLHWDRITRLEKGKIYRQGNLFDFLRLTEWRGPRVLYFGDHLYSDLADLMLRHGWRTGAIIPELEREIRIINTEQYMHSLT----WQQALTGLLERMQTYQDAESRQ-VLATWMKERQELRCITKALFNAQFGSIFRT-FHNPTYFSRRLVRFSDLYMASLSCLLNY 512          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: NT5D3_XENTR (5'-nucleotidase domain-containing protein 3 OS=Xenopus tropicalis GN=nt5dc3 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24
Identity = 77/215 (35.81%), Postives = 110/215 (51.16%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDH-PFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPS-KAGWRTAAIIHELESEIRIQNDETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLYPPEAWLHVPFDIKIMPHHVKVP 643
            VI QA+KP+F+     PFR    E+  L + K+      + Y  G L  FL++T W G +V+YFGDH++SDL   + K GWRT AII EL+SEI I N   Y         +  LL ++        R    Q++L +  +ERQ+ R + +KMFN+ FG+ F TD    + F   + R+AD+Y       L Y     LH  F  K  P   ++P
Sbjct:  308 VIVQADKPNFFNDKRRPFRKV-AERGILLWDKIHHLEKGQTYKQGNLFEFLKLTGWRGSKVLYFGDHIYSDLADLTLKHGWRTGAIIPELKSEIEIMNTSHYITTVTWLQGLTGLLERMQV-----YRDAESQMVLQDWIKERQEMRDLARKMFNRQFGSIFRTD-HNPTYFLRRLSRFADIYMESLSCLLNYD----LHHTFYPKRTPLQHELP 511          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: 5NTC_DICDI (Cytosolic purine 5'-nucleotidase OS=Dictyostelium discoideum GN=nt5c2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.395e-17
Identity = 63/197 (31.98%), Postives = 93/197 (47.21%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDHPFRCYDTEKDTLAFTKV-DAFIPNKIYYHGCLKSFLQITKWNGPEVIYFGDHLFSDLRGPSKA-GWRTAAIIHELESEIRIQN---DETYRFEQAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLYP 580
            +I  A+KP F++     R  DTE   L  T V D F   K+Y+ G L  F ++T   G  V+Y GDH+F+D+    K  GWR   ++ EL+ E+ + N   D T      +F I  E+   L +        E     L   N++   A       +NK FG+ F  +  + + F+  + RYAD+YTS   N L YP
Sbjct:  379 IIVGADKPRFFSEGTTIREVDTETGNLRITNVKDRFEQGKVYHGGSLSLFQKLTGAKGSRVLYIGDHIFADIIKSKKTHGWRNLLVVPELQHELEVMNQQKDTTIHLMNLEF-IRAEIYRGLDSESTTPPDIEVLHQHLKNTNDKLNFA-------YNKYFGSLF-KNGSKSTFFSMQVQRYADLYTSDYLNLLNYP 566          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: 5NTC_XENLA (Cytosolic purine 5'-nucleotidase OS=Xenopus laevis GN=nt5c2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.952e-11
Identity = 50/196 (25.51%), Postives = 83/196 (42.35%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHGCLKSFL-QITKWNGPEVIYFGDHLFSD-LRGPSKAGWRTAAIIHELESEIRIQNDETYRFE--QAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLYP 580
            ++  A KP F+      R  DT    L        + + I Y G     L  +    G +++Y GDH+F D L+   + GWRT  +I EL  E+ +  D++  FE  Q+    + EL   L ++        + Q  + ++  +      MM  +F             +++ FA  + RYAD+Y +   N L YP
Sbjct:  286 ILVDARKPLFFGEGTVLRQVDTNTGKLKIGTYTGPLQHGIVYSGGSSDILCDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELAQELHVWTDKSSLFEELQSLDIFLAELYKHLDSSSNERPDISSIQRRVKKVTHDMDMCYGMMGSLFRSG---------SRQTLFASQVMRYADLYAASFINLLYYP 472          
BLAST of FC872303 vs. ExPASy Swiss-Prot
Match: 5NTC_PONAB (Cytosolic purine 5'-nucleotidase OS=Pongo abelii GN=NT5C2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 49/196 (25.00%), Postives = 84/196 (42.86%), Query Frame = 2
Query:    5 VIAQANKPDFYTSDHPFRCYDTEKDTLAFTKVDAFIPNKIYYHG-CLKSFLQITKWNGPEVIYFGDHLFSD-LRGPSKAGWRTAAIIHELESEIRIQNDETYRFE--QAKFHIIQELLGKLHATVANSQRTEACQLLLAELNEERQKARRMMKKMFNKSFGATFLTDTGQESAFAYHIHRYADVYTSKAENFLLYP 580
            ++  A KP F+      R  DT+   L        + + I Y G    +   +    G +++Y GDH+F D L+   + GWRT  +I EL  E+ +  D++  FE  Q+    + EL   L ++        + Q  + ++  +      MM  +F             +++ FA  + RYAD+Y +   N L YP
Sbjct:  286 ILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELAQELHVWTDKSSLFEELQSLDIFLAELYKHLDSSSNERPDISSIQRRIKKVTHDMDMCYGMMGSLFRSG---------SRQTLFASQVMRYADLYAASFINLLYYP 472          
The following BLAST results are available for this feature:
BLAST of FC872303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
NT5D_DICDI1.484e-3539.915'-nucleotidase domain-containing protein DDB_G027... [more]
NT5D3_MOUSE1.259e-2638.865'-nucleotidase domain-containing protein 3 OS=Mus... [more]
NT5D3_HUMAN3.663e-2638.345'-nucleotidase domain-containing protein 3 OS=Hom... [more]
NT5D2_HUMAN2.375e-2540.415'-nucleotidase domain-containing protein 2 OS=Hom... [more]
NT5D3_XENLA5.290e-2536.285'-nucleotidase domain-containing protein 3 OS=Xen... [more]
NT5D2_RAT5.290e-2540.415'-nucleotidase domain-containing protein 2 OS=Rat... [more]
NT5D3_XENTR3.429e-2435.815'-nucleotidase domain-containing protein 3 OS=Xen... [more]
5NTC_DICDI1.395e-1731.98Cytosolic purine 5'-nucleotidase OS=Dictyostelium ... [more]
5NTC_XENLA1.952e-1125.51Cytosolic purine 5'-nucleotidase OS=Xenopus laevis... [more]
5NTC_PONAB2.549e-1125.00Cytosolic purine 5'-nucleotidase OS=Pongo abelii G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DD06ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872303 ID=FC872303; Name=FC872303; organism=Citrus clementina; type=EST; length=895bp
GGGGGTGATTGCGCAAGCAAATAAGCCAGACTTTTACACATCTGACCATC
CTTTCCGCTGCTATGACACAGAGAAGGACACTTTAGCTTTTACAAAGGTG
GATGCGTTTATTCCAAATAAAATCTATTACCATGGATGCCTTAAATCATT
TCTTCAAATTACTAAGTGGAATGGCCCAGAGGTGATATACTTTGGTGATC
ACCTATTTAGTGACCTAAGAGGGCCTTCGAAGGCTGGTTGGCGCACTGCT
GCCATCATCCATGAACTGGAAAGTGAAATACGTATACAAAATGATGAAAC
TTATCGTTTTGAGCAGGCAAAATTTCATATAATACAAGAATTGCTTGGTA
AATTGCATGCGACTGTAGCTAATAGTCAAAGGACTGAAGCATGCCAGTTA
CTTTTGGCTGAGCTTAATGAGGAAAGGCAGAAGGCACGCCGGATGATGAA
GAAAATGTTCAATAAATCATTTGGAGCCACATTCCTGACCGACACTGGTC
AAGAATCTGCTTTTGCATATCATATTCATCGATATGCAGATGTTTATACC
AGTAAGGCAGAGAACTTTTTGCTGTACCCACCAGAAGCATGGCTTCATGT
TCCATTTGATATCAAAATCATGCCACATCATGTGAAGGTCCCCTCAAGCT
TGTTCAGAAATCAATAGTTGGTAGTAGTCCAGCAATTCTTGATTGAGGTG
AAAATTTTTTCATATTTCGCCATTATTAGATTTACTGTTTATTCATCTAT
AGTTCAACAATAAGAAGGGCAACAATAGCACGCTCATGTTCCATGATTAT
GTGGAAACGTGAAGATTGGCTGGGAAGATAACTTGCATAGAAATTGTAAG
TAACACTAATATTCTTTTTGAAACCTCGATTCCTTTTATAGTTAA
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