FC872306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_THESM (Tyrosyl-tRNA synthetase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tyrS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.652e-27 Identity = 69/186 (37.10%), Postives = 109/186 (58.60%), Query Frame = 1 Query: 4 GMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ----------------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDK-KFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVK 486 GMDQR +V+ARE + +K +K KPI + HH+L GLQ+ Q KMSKS P SA+++ D E+ K++KA+CP V NP L++ ++IIF + +F + R GG+ T+ ++EEL D+ EG LHP DLK ++++ + ++L+PVR +F K+ +L+K V+ Sbjct: 187 GMDQRKAHVIAREVAEKLKYHPLVWDGKKVKPIAVHHHLLLGLQEPPKWPIEGEEEFKEIKAQMKMSKSKPYSAVFIHDTPEEIKQKLRKAFCPAGEVNYNPVLDWAEHIIFREEPTEFTIHRPAKFGGDVTYTTFEELKRDFAEGKLHPLDLKNAVAEYLVELLKPVREYFEKHPEPLELMKSVQ 372
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_THEON (Tyrosyl-tRNA synthetase OS=Thermococcus onnurineus (strain NA1) GN=tyrS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.652e-27 Identity = 68/186 (36.56%), Postives = 109/186 (58.60%), Query Frame = 1 Query: 4 GMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQG----------------QEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDK-KFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVK 486 GMDQR +V+A E +K K KP+ L HH+L GLQ+ Q KMSKS P SA+++ D E+ K++KA+CP + V+ NP L++ +YIIF + +F + R GG+ T+ ++EEL D+ EG LHP DLK ++++ + ++L+PVR++F K+ +L++ +K Sbjct: 187 GMDQRKAHVIAIEVAQKLKYHAIEHNGEKLKPVALHHHLLLGLQEPPVWPIESEEQYKELKTQMKMSKSKPYSAVFIHDTPEEIKQKLRKAFCPAREVKYNPVLDWAEYIIFREEPTEFTIHRPAKFGGDVTYTTFEELKRDFAEGKLHPLDLKNAVAEYLIELLKPVRDYFEKHPEPLELMREIK 372
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_PYRKO (Tyrosyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=tyrS PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.652e-27 Identity = 68/186 (36.56%), Postives = 108/186 (58.06%), Query Frame = 1 Query: 4 GMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQG----------------QEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDK-KFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVK 486 GMDQR +V+A E +K K KP+ L HH+L GLQ+ Q KMSKS P SA+++ D E+ K++KA+CP + V+ NP L++ +YIIF + +F + R GG+ T+ ++EEL D+ EG LHP DLK ++++ + ++L+PVR +F K+ +L++ +K Sbjct: 187 GMDQRKAHVIAIEVAQKLKYHPLEWKGEKLKPVALHHHLLLGLQEPPVWPIESEEQFKELKTQMKMSKSKPYSAVFIHDSPEEIKQKLRKAFCPAREVKYNPVLDWAEYIIFREEPTEFTIHRPAKFGGDVTYTTFEELKKDFAEGKLHPLDLKNAVAEYLIELLKPVREYFEKHPEPLELMREIK 372
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_PYRHO (Tyrosyl-tRNA synthetase OS=Pyrococcus horikoshii GN=tyrS PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.157e-27 Identity = 67/186 (36.02%), Postives = 107/186 (57.53%), Query Frame = 1 Query: 4 GMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ----------------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDK-KFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVK 486 GMDQR +V+A E ++ K KP+ + HH+L GLQ+ Q KMSKS P SA+++ D E+ K++KA+CP + V NP L++++YIIF + +F V R GG+ T+ ++EEL D+ EG LHP DLK ++++ + +L+P+R +F K+ +L++ VK Sbjct: 187 GMDQRKAHVIAIEVAQKLRYHPIVHEGEKLKPVAVHHHLLLGLQEPPKWPIESEEEFKEIKAQMKMSKSKPYSAVFIHDSPEEIRQKLRKAFCPAREVRYNPVLDWVEYIIFREEPTEFTVHRPAKFGGDVTYTTFEELKRDFAEGKLHPLDLKNAVAEYLINLLEPIRRYFEKHPEPLELMRSVK 372
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_THEGJ (Tyrosyl-tRNA synthetase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tyrS PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.276e-27 Identity = 69/186 (37.10%), Postives = 106/186 (56.99%), Query Frame = 1 Query: 4 GMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQG----------------QEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDK-KFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVK 486 GMDQR +V+A E +K K KP+ L HH+L GLQ+ Q KMSKS P SA+++ D E+ K++KA+CP + V NP L++ +YIIF + +F + R GG+ T+ + EEL D+ EG LHP DLK ++++ + ++L+PVR +F K+ +L++ VK Sbjct: 187 GMDQRKAHVIAIEVAQKLKYHPLEWKGEKLKPVALHHHLLLGLQEPPVWPIESEEQFKELKTQMKMSKSKPYSAVFIHDSPEEIRQKLRKAFCPAREVRYNPVLDWAEYIIFREEPTEFTIHRPAKFGGDVTYTTSEELKRDFAEGKLHPLDLKNAVAEYLIELLKPVREYFEKHPEPLELMREVK 372
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_SULSO (Tyrosyl-tRNA synthetase OS=Sulfolobus solfataricus GN=tyrS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27 Identity = 66/177 (37.29%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQE----------------KMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRV 483 GG DQR ++LAR+ + + +K K + + +L GLQ GQ KMSKS P SAI++ D +V KI AYCP + E NP L+ +KYIIFP +ER GG+ F+ YEEL Y EG +HP DLK + ++ +N+IL+P+R K +++++++ Sbjct: 185 GGTDQRKAHMLARDVAEKMGKK-KIVSIHTPLLVGLQGGQRMNITEGMEEDDIQAEIKMSKSKPESAIFVNDSREDVERKIMGAYCPKGVAENNPILQILKYIIFPRYNFVKIERDIKYGGDVEFKDYEELERTYIEGKIHPMDLKKTTARKLNEILEPIRKSLEKKPEFEEMIQKI 360
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYYC_XENLA (Tyrosyl-tRNA synthetase, cytoplasmic OS=Xenopus laevis GN=yars PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.071e-26 Identity = 65/149 (43.62%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFN 447 GG+DQR + A +Y + K I L + M+PGL KMS S+ S I + D A+V K+KKA+C P VE N L ++++++FP +FVV R E GGNKT+ +E L D+ E +HPGDLK S+ KA+NK+L P+R FN Sbjct: 184 GGVDQRKIFTFAEKYLPALGYA-KRIHLMNPMVPGLTGA--KMSSSEEESKIDLLDSPADVKKKLKKAFCEPGNVENNGVLSFVRHVLFPLKSEFVVLRDEKFGGNKTYTDFETLEKDFAEELVHPGDLKASVEKALNKLLHPIREKFN 329
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYYC_XENTR (Tyrosyl-tRNA synthetase, cytoplasmic OS=Xenopus tropicalis GN=yars PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.398e-26 Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKKFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFN 447 GG+DQR + A +Y + K I L + M+PGL KMS S+ S I + D A+V K+KKA+C P +E N L ++++++FP +FVV R E GGNKT+ +E L D+ E +HPGDLK S+ KA+NK+L P+R FN Sbjct: 184 GGVDQRKIFTFAEKYLPALGYA-KRIHLMNPMVPGLTGA--KMSSSEEESKIDLLDSPADVKKKLKKAFCEPGNIENNGVLSFVRHVLFPLKSEFVVLRDEKFGGNKTYTDFETLEKDFTEQLVHPGDLKASVEKALNKLLDPIREKFN 329
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_PYRFU (Tyrosyl-tRNA synthetase OS=Pyrococcus furiosus GN=tyrS PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.826e-26 Identity = 62/186 (33.33%), Postives = 109/186 (58.60%), Query Frame = 1 Query: 4 GMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGLQQ----------------GQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDK-KFVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVK 486 GMDQR +V+A E + ++ K KP+ + HH+L GLQ+ + KMSKS P SA+++ D E+ K++KA+CP + V+ NP L++++Y++F + +F + R GG+ T+ ++EEL D+ EG LHP DLK ++++ + +L+P+R +F ++ +L+K V+ Sbjct: 187 GMDQRKAHVIAIEVAEKLRYHPIIHNGEKLKPVAVHHHLLLGLQEPPKWPIESEEEFKEIKAEMKMSKSKPYSAVFIHDSPEEIREKLRKAFCPAREVKYNPVLDWVEYLVFREEPTEFTIHRPAKYGGDVTYTTFEELKRDFAEGKLHPLDLKNAVAEYLIDLLEPIRKYFERHPEPLELMKSVQ 372
BLAST of FC872306 vs. ExPASy Swiss-Prot
Match: SYY_PYRCJ (Tyrosyl-tRNA synthetase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tyrS PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.826e-26 Identity = 70/188 (37.23%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 1 GGMDQRILNVLAREYCDDIK--------RKNKPIILSHHMLPGL----------QQGQEKMSKSDPSSAIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIKYIIFPWDKK--FVVERSEANGGNKTFESYEELVADYEEGNLHPGDLKPSLSKAINKILQPVRNHFNKNANAQDLLKRVKGYRVTR 504 GG+DQR ++LAR+ D I+ ++ KP+ L H +LP L + + KMSKS P SAI++ D E+ K+ KAYCPP+ VE NP LE ++ F ++K V++R E GG+ YEEL A Y+EG +HP DLK ++A+ +L+PV F LL+ ++ +TR Sbjct: 187 GGIDQRRAHILARQVADKIRFYPLTVDGKRIKPVALHHRLLPALNISSKPSSKEELSELKMSKSIPQSAIFVHDSPEEIRQKVAKAYCPPREVEYNPVLELLRIAAFREERKTPLVIKRPEKYGGDVEVWKYEELEAMYKEGKIHPADLKAVTAEALAALLEPVYKFF--QGPGAKLLEEMRNIAITR 372 The following BLAST results are available for this feature:
BLAST of FC872306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872306 ID=FC872306; Name=FC872306; organism=Citrus clementina; type=EST; length=692bpback to top |