FC872512

Overview
NameFC872512
Unique NameFC872512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig135 contig Ccv1_Contig135:389..1185. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC1_SOLTU (Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.645e-64
Identity = 130/168 (77.38%), Postives = 140/168 (83.33%), Query Frame = 1
Query:    7 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRAAVKIPVVSENEGGNGTLPGGSALNAAG----ETPSEASSPRNI 498
            LAKFGMTPL+AAVYVGAMQNIFSK AKYS FDP KEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLA+STPYLGG+LLVIVLAWLGAA+SLD QFT LRQ         RA++KIPVVS+NE GNG L   S+LN AG       SE SSPR++
Sbjct:  464 LAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLASSTPYLGGVLLVIVLAWLGAAKSLDGQFTQLRQEEDLEKEMERASLKIPVVSQNENGNGPLSSESSLNPAGGDSTNASSEPSSPRSL 631          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC1_ARATH (ADP,ATP carrier protein 1, chloroplastic OS=Arabidopsis thaliana GN=AATP1 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.823e-55
Identity = 119/168 (70.83%), Postives = 133/168 (79.17%), Query Frame = 1
Query:    7 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRA-AVKIPVVSENEGGNGTLPGGSALNAAGETPS---EASSPRNI 498
            +AK GMTPL+AAVYVGA+QNIFSK AKYS FDP KEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMIL+FGSLANSTPYLG ILLVIV AWL AA+SL+ QF +LR          RA +VKIPVVS++E GNG+L         GE+PS   E S+P N+
Sbjct:  466 VAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVKIPVVSQDESGNGSL---------GESPSSSPEKSAPTNL 624          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC2_ARATH (ADP,ATP carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=AATP2 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.306e-50
Identity = 106/141 (75.18%), Postives = 115/141 (81.56%), Query Frame = 1
Query:    7 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRA-AVKIPVVSENEGGNG 426
            +AK GMTPL+AAVYVGA+QNIFSK AKYS FDP KEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLG ILL IV AWL AA+SL+ QF  L           RA +VKIPVVS+ +  +G
Sbjct:  463 VAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGVILLGIVTAWLAAAKSLEGQFNTLMSEEELEREMERASSVKIPVVSQEDAPSG 603          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC1_CHLPN (ADP,ATP carrier protein 1 OS=Chlamydia pneumoniae GN=tlcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.454e-28
Identity = 67/113 (59.29%), Postives = 80/113 (70.80%), Query Frame = 1
Query:    1 GALAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 339
            G +A FG TPL+ AV VGA+QNI SK  KY+ FD  KEMAYIPLD++ KVKGKAAIDVV    GKSGGALIQQ +++  GS+   TPYL  ILL I+  WL +A  L+  F A
Sbjct:  384 GLVAMFGTTPLMLAVVVGAIQNILSKSTKYALFDSTKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGALIQQGLLVICGSIGAMTPYLAVILLFIIAIWLVSATKLNKLFLA 496          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC1_CHLMU (ADP,ATP carrier protein 1 OS=Chlamydia muridarum GN=tlcA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27
Identity = 62/113 (54.87%), Postives = 79/113 (69.91%), Query Frame = 1
Query:    1 GALAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 339
            G +A  G TPL+ AV VGA+QNI SK  KY+ FD  KEMAYIPLD++ KVKGKAAIDVV    GKSGG+LIQQ +++  GS++  TP+L   L  I++ WL +A  L+  F A
Sbjct:  382 GLVAALGTTPLMLAVVVGAVQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQGLLVVCGSISAMTPFLAVALFAIIMVWLTSATKLNKLFLA 494          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLC1_CHLTR (ADP,ATP carrier protein 1 OS=Chlamydia trachomatis GN=tlcA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.979e-27
Identity = 62/113 (54.87%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 GALAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 339
            G +A  G TPL+ AV VGA+QNI SK  KY+ FD  KEMAYIPLD++ KVKGKAAIDVV    GKSGG+LIQQ +++  GS+   TP+L   L  I++ WL +A  L+  F A
Sbjct:  382 GLVAALGTTPLMLAVVVGAIQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQGLLVVCGSIGAMTPFLAVALFAIIMVWLTSATKLNKLFLA 494          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCA_RICBR (ADP,ATP carrier protein 1 OS=Rickettsia bellii (strain RML369-C) GN=tlcA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 1
Query:   28 PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSL--ANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 342
            PL  AV +G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +L    +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  386 PLALAVMIGTIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFIIFPALGFVEATPYFASIFFVIVILWIYAVKGLNKEYQVL 492          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCA_RICPR (ADP,ATP carrier protein 1 OS=Rickettsia prowazekii GN=tlcA PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20
Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = 1
Query:   25 TPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 342
            +PL  AV +G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+   LGKSGGA+IQ   F++        +TPY   I  +IV+ W+ A + L+ ++  L
Sbjct:  385 SPLTLAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPVFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVL 492          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCA_RICTY (ADP,ATP carrier protein 1 OS=Rickettsia typhi GN=tlcA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.486e-20
Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 1
Query:   25 TPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLA--NSTPYLGGILLVIVLAWLGAARSLDTQFTAL 342
            +PL  AV  G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+   LGKSGGA+IQ    + F +     +TPY   I  +IV+ W+ A + L+ ++  L
Sbjct:  385 SPLTLAVMFGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPAFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVL 492          
BLAST of FC872512 vs. ExPASy Swiss-Prot
Match: TLCA_RICFE (ADP,ATP carrier protein 1 OS=Rickettsia felis GN=tlcA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.486e-20
Identity = 49/107 (45.79%), Postives = 68/107 (63.55%), Query Frame = 1
Query:   28 PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGS--LANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 342
            PL  AV +G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +     +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  386 PLALAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFILFPAFGFVEATPYFASIFFVIVILWIYAVKGLNKEYQVL 492          
The following BLAST results are available for this feature:
BLAST of FC872512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
TLC1_SOLTU1.645e-6477.38Plastidic ATP/ADP-transporter OS=Solanum tuberosum... [more]
TLC1_ARATH1.823e-5570.83ADP,ATP carrier protein 1, chloroplastic OS=Arabid... [more]
TLC2_ARATH2.306e-5075.18ADP,ATP carrier protein 2, chloroplastic OS=Arabid... [more]
TLC1_CHLPN1.454e-2859.29ADP,ATP carrier protein 1 OS=Chlamydia pneumoniae ... [more]
TLC1_CHLMU6.109e-2754.87ADP,ATP carrier protein 1 OS=Chlamydia muridarum G... [more]
TLC1_CHLTR7.979e-2754.87ADP,ATP carrier protein 1 OS=Chlamydia trachomatis... [more]
TLCA_RICBR6.543e-2146.73ADP,ATP carrier protein 1 OS=Rickettsia bellii (st... [more]
TLCA_RICPR1.116e-2045.37ADP,ATP carrier protein 1 OS=Rickettsia prowazekii... [more]
TLCA_RICTY2.486e-2045.37ADP,ATP carrier protein 1 OS=Rickettsia typhi GN=t... [more]
TLCA_RICFE2.486e-2045.79ADP,ATP carrier protein 1 OS=Rickettsia felis GN=t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AG11ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB3AG11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872512 ID=FC872512; Name=FC872512; organism=Citrus clementina; type=EST; length=797bp
GGGGCTCTTGCGAAGTTCGGAATGACTCCTCTTATTGCTGCTGTATATGT
GGGTGCCATGCAAAATATTTTCAGTAAGTGTGCCAAGTACAGCTAGTTTG
ATCCTCGCAAAGAAATGGCCTACATTCCATTAGATGAAGACACCAAGGTT
AAAGGGAAGGCAGCCATCGATGTTGTGTGCAACCCGTTGGGGAAATCTGG
AGGTGCTCTTATTCAGCAGTTTATGATATTAACCTTTGGGTCCCTTGCGA
ATTCAACTCCTTATCTTGGAGGGATACTTTTGGTGATTGTTCTTGCATGG
TTAGGAGCAGCCAGGTCTTTAGATACCCAATTTACAGCTTTGCGTCAGGA
AGAAGAGCTTGAGAAGGAGATGGAAAGAGCTGCTGTTAAGATCCCAGTTG
TCTCTGAAAATGAAGGCGGGAATGGTACTCTTCCAGGTGGATCAGCTTTG
AATGCAGCAGGTGAGACACCCAGTGAAGCATCTAGTCCACGCAATATCTG
AAATAGTTTCTTCCAATTCCTTGCCGCATGAAGAATGAGAAGCATCAATA
CTTGAGGTATTGCTTGTAGGATCTTCTCAAATTACACAAATAATAGTAGC
TAAACAAAGTATGAGCCCGTCTGTCTTAATTCCGCCTTTTTCCCGTAGAT
AATGAGTTTAGTATCTGTTTACTCATACATTCATGTTCTTTGTAGAATTC
GAATTTGGTTTTTTATTGATAGCAACAACATTAAATTTAATAATTTCTTG
ATTATATCTTAGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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