FC872521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872521 vs. ExPASy Swiss-Prot
Match: GDE1_YEAST (Glycerophosphodiester phosphodiesterase GDE1 OS=Saccharomyces cerevisiae GN=GDE1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 76/261 (29.12%), Postives = 116/261 (44.44%), Query Frame = 3 Query: 249 VMGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEG----EIIEKRVTDITLA--EFLSYGPQNDPENV-GKPMLRKTKDGRIFE----------WKVEKDTP-------------------------------------LCTLQEAFEKVDQSVGFNVELKF-------DDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGG 848 V+GHRG G N S Q + ENT+ SF AA ++EFDVQ+T+D PV++HD + E+ ++ D+ A E + G + P +V G + GR + W + + P TL+E F+K+ +VGFN+E KF +++L E+ H ++ +LKVVF++A GR I+FSSF PD +++ Q P+ FLT GG Sbjct: 874 VIGHRGLGKNNPNKSLQ----IGENTVESFIMAASLGASYVEFDVQLTKDNVPVVYHDFLVAETGVDIPMHELTLEQFLDLNNADKEHIQRGAGHSPHHVNGADTALQKYRGRSVDDSDVSTLRRAWDLHDNDPNGKSNNAHWSDNRMRLTKTFKKNNFKGNARGHSIASSFVTLKELFKKIPANVGFNIECKFPMLDEAEEEELGQIMMEMNHWVDTVLKVVFDNANGRDIIFSSFHPDICIMLSLKQPVIPILFLTEGG 1130
BLAST of FC872521 vs. ExPASy Swiss-Prot
Match: GDE1_ASHGO (Glycerophosphodiester phosphodiesterase GDE1 OS=Ashbya gossypii GN=GDE1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.167e-19 Identity = 69/255 (27.06%), Postives = 121/255 (47.45%), Query Frame = 3 Query: 249 VMGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFIFTKDEGEIIEKRVT----------------------------------DITLAEFL--SYGPQNDPENVGKPM-------LRKTKDGRIFEWKVEKD-----TPLCTLQEAFEKVDQSVGFNVELKF-------DDQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNGG 848 V+GHRG G NM + + + ENT+ SF AAA ++EFDVQ+T+D P + + +F+ + +I +T D + AE + S + D + + + +R T+ + +K + TL+E F+K+ Q+VGFN+E K+ ++ + E+ H ++ +L+VV+++ +GR ++FSSFQPD L++ Q ++P+ FLT GG Sbjct: 974 VIGHRGLGKNM---NTNKSLQLGENTVESFIAAASLGASYVEFDVQLTKDNIP-VVYHDFLVAESGVDIPMHELTLEQFLDLNGERQRHQDAREAHRNHRSPNGRRLSMDDSSAELIKRSLMMRGDEDRTARDLNTIYGDRMRLTRTFKKNAFKANSRGHAIASSFVTLKELFKKIPQNVGFNIECKYPMVDEAEEEDIGPIAVEMNHWIDTVLEVVYDNVEGRDVIFSSFQPDVCLMLSLKQPSFPILFLTEGG 1224
BLAST of FC872521 vs. ExPASy Swiss-Prot
Match: GDE5_MOUSE (Putative glycerophosphodiester phosphodiesterase 5 OS=Mus musculus GN=Gde5 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19 Identity = 65/217 (29.95%), Postives = 111/217 (51.15%), Query Frame = 3 Query: 252 MGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFI-------FTKDEGEIIEKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIFEWKVE----KDTPLCTLQEAFEKVDQSVGFNVELKFD--------DQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNG 845 +GHRG+G + ++ ++ ++ENTI S AA H F+EFDV +++D PV++HD + D E+ E V ++T + + KTKD + ++ E ++ P +L+ E + ++VGFN+E+K+ D + T ++ L+ ILK V E++ R I+FSSF D ++R+ Q+ YP+ FLT G Sbjct: 324 VGHRGAGNS---TTTAKLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKRKYEADPVELFEIPVKELTFDQLQLL-------KLSHVTALKTKDRKQSLYEEENFFSENQPFPSLKMVLESLPENVGFNIEIKWICQHRDGVWDGNLSTYFDMNVFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQG 530
BLAST of FC872521 vs. ExPASy Swiss-Prot
Match: GDE5_RAT (Putative glycerophosphodiester phosphodiesterase 5 OS=Rattus norvegicus GN=Gde5 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18 Identity = 65/217 (29.95%), Postives = 109/217 (50.23%), Query Frame = 3 Query: 252 MGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFI-------FTKDEGEIIEKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIF----EWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFD--------DQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNG 845 +GHRG+G + ++ ++ ++ENTI S AA H F+EFDV +++D PV++HD + D E+ E V ++T + + KTKD + E ++ P +L+ E + ++VGFN+E+K+ D + T ++ L+ ILK V E++ R I+FSSF D ++R+ Q+ YP+ FLT G Sbjct: 321 VGHRGAGNS---TTTAKLAKVQENTIASLRNAASHGAAFVEFDVHLSKDLVPVVYHDLTCCLTMKRKYEADPVELFEIPVKELTFDQLQLL-------KLSHVTALKTKDQKQCMAEEENSFSENQPFPSLKMVLESLPENVGFNIEIKWICQHRDGVWDGNLSTYFDMNAFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQG 527
BLAST of FC872521 vs. ExPASy Swiss-Prot
Match: GDE5_HUMAN (Putative glycerophosphodiester phosphodiesterase 5 OS=Homo sapiens GN=GDE5 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18 Identity = 73/253 (28.85%), Postives = 124/253 (49.01%), Query Frame = 3 Query: 147 GNVTLNYLHSPRVCKGVNEDGVETKSGYKFPKFVV-MGHRGSGMNMLRSSDQRMKSMKENTILSFNAAARHPLDFIEFDVQVTRDGCPVIFHDNFI-------FTKDEGEIIEKRVTDITLAEFLSYGPQNDPENVGKPMLRKTKDGRIF----EWKVEKDTPLCTLQEAFEKVDQSVGFNVELKFD--------DQLVYTEEELTHALEAILKVVFEHAQGRPIMFSSFQPDAALLIRKLQSTYPVFFLTNG 845 G V ++Y+ + G + D + S Y P+ + +GHRG+G + ++ ++ ++ENTI S AA H F+EFDV +++D PV++HD F D E+ E V ++T + + K+KD + E ++ P +L+ E + + VGFN+E+K+ D + T ++ L+ ILK V E++ R I+FSSF D ++R+ Q+ YP+ FLT G Sbjct: 286 GKVRVDYIII-KPLPGYSCDMKSSFSKYWKPRIPLDVGHRGAGNS---TTTAQLAKVQENTIASLRNAASHGAAFVEFDVHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLL-------KLTHVTALKSKDRKESVVQEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMNLFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQG 527 The following BLAST results are available for this feature:
BLAST of FC872521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872521 ID=FC872521; Name=FC872521; organism=Citrus clementina; type=EST; length=848bpback to top |