FC872526

Overview
NameFC872526
Unique NameFC872526
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length873
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBL1_MEDSA (Non-symbiotic hemoglobin 1 OS=Medicago sativa GN=MHB1 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.706e-69
Identity = 127/159 (79.87%), Postives = 141/159 (88.68%), Query Frame = 2
Query:  257 GSFNVTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMKPPS 733
            G+ +   FTEEQEALVVKSWNAMKKNS EL LK FL+IFEIAPSA+KLF+FLKDS +P+EQN KLKPHA +VF+MTCESAVQLRK+GKVTVRES+LK LGA HFKYGV DEHFEVTK+ALLETIKEAVPEMWSP +KNAW EAYDQL  AIK+EMKP S
Sbjct:    2 GTLDTKGFTEEQEALVVKSWNAMKKNSAELGLKLFLKIFEIAPSAQKLFSFLKDSKVPLEQNTKLKPHAMSVFLMTCESAVQLRKSGKVTVRESSLKKLGANHFKYGVVDEHFEVTKFALLETIKEAVPEMWSPAMKNAWGEAYDQLVNAIKSEMKPSS 160          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBP2_CASGL (Hemoglobin-2 OS=Casuarina glauca GN=HBII PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.831e-68
Identity = 125/152 (82.24%), Postives = 142/152 (93.42%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMKPPS 733
            FTEEQEALVVKSW+AMK N+GEL LKFFL+IFEIAPSA+KLF+FLKDS++P+E+NPKLK HA +VF+MTCESAVQLRKAGKVTVRES+LK LGA+HFK+GVADEHFEVTK+ALLETIKEAVPE WSPE+KNAW EAYD+L AAIK EMKP S
Sbjct:    9 FTEEQEALVVKSWSAMKPNAGELGLKFFLKIFEIAPSAQKLFSFLKDSNVPLERNPKLKSHAMSVFLMTCESAVQLRKAGKVTVRESSLKKLGASHFKHGVADEHFEVTKFALLETIKEAVPETWSPEMKNAWGEAYDKLVAAIKLEMKPSS 160          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBL_TRETO (Non-symbiotic hemoglobin OS=Trema tomentosa GN=GLB1 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.090e-67
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMKPPS 733
            FTEEQEALVVKSW  MKKNS EL LKFFL+IFEIAPSAK LF++LKDS IP+EQNPKLKPHA TVFVMTCESAVQLRKAGKVTVRESNLK LGA HFK GV +EHFE T++ALLETIKEAVPEMWSPE+KNAW EAYDQL AAIK+EMKP S
Sbjct:   10 FTEEQEALVVKSWAVMKKNSAELGLKFFLKIFEIAPSAKNLFSYLKDSPIPLEQNPKLKPHAMTVFVMTCESAVQLRKAGKVTVRESNLKRLGAIHFKNGVVNEHFE-TRFALLETIKEAVPEMWSPEMKNAWGEAYDQLVAAIKSEMKPSS 160          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBL1_GOSHI (Non-symbiotic hemoglobin 1 OS=Gossypium hirsutum GN=HB1 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.090e-67
Identity = 124/149 (83.22%), Postives = 136/149 (91.28%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 724
            FTEEQEALVVKSW  MKK + EL LKFFL+IFEIAPSAKKLF+FL+DS++P+EQN KLKPHA +VFVMTCESAVQLRKAGKVTVRESNLK LGATHFKYGV DEHFEVTK+ALLETIKEAVP+MWS E+KNAW EAYD+L AAIK EMK
Sbjct:    9 FTEEQEALVVKSWTVMKKKTAELGLKFFLKIFEIAPSAKKLFSFLRDSNVPLEQNTKLKPHAMSVFVMTCESAVQLRKAGKVTVRESNLKKLGATHFKYGVVDEHFEVTKFALLETIKEAVPDMWSDEMKNAWGEAYDRLVAAIKIEMK 157          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBPL_PARRI (Non-legume hemoglobin OS=Parasponia rigida PE=1 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 5.905e-66
Identity = 122/152 (80.26%), Postives = 136/152 (89.47%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMKPPS 733
            FTEEQEALVVK+W  MKKNS EL L+FFL+IFEIAPSAK LF++LKDS +P+EQNPKLKPHATTVFVMTCESAVQLRKAGK TV+ES+LK +GA HFK GV +EHFEVT++ALLETIKEAVPEMWSPE+KNAW  AYDQL AAIK EMKP S
Sbjct:   10 FTEEQEALVVKAWAVMKKNSAELGLQFFLKIFEIAPSAKNLFSYLKDSPVPLEQNPKLKPHATTVFVMTCESAVQLRKAGKATVKESDLKRIGAIHFKTGVVNEHFEVTRFALLETIKEAVPEMWSPEMKNAWGVAYDQLVAAIKFEMKPSS 161          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBPL_PARAD (Non-legume hemoglobin OS=Parasponia andersonii PE=1 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 5.905e-66
Identity = 122/152 (80.26%), Postives = 136/152 (89.47%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMKPPS 733
            FTEEQEALVVK+W  MKKNS EL L+FFL+IFEIAPSAK LF++LKDS +P+EQNPKLKPHATTVFVMTCESAVQLRKAGK TV+ES+LK +GA HFK GV +EHFEVT++ALLETIKEAVPEMWSPE+KNAW  AYDQL AAIK EMKP S
Sbjct:   10 FTEEQEALVVKAWAVMKKNSAELGLQFFLKIFEIAPSAKNLFSYLKDSPVPLEQNPKLKPHATTVFVMTCESAVQLRKAGKATVKESDLKRIGAIHFKTGVVNEHFEVTRFALLETIKEAVPEMWSPEMKNAWGVAYDQLVAAIKFEMKPSS 161          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBL1_ARATH (Non-symbiotic hemoglobin 1 OS=Arabidopsis thaliana GN=AHB1 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.778e-62
Identity = 116/148 (78.38%), Postives = 128/148 (86.49%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 721
            FTEEQEALVVKSW+ MKKNS EL LK F++IFEIAP+ KK+F+FL+DS IP EQNPKLKPHA +VFVM CESAVQLRK GKVTVRE+ LK LGA+H KYGV DEHFEV KYALLETIKEAVPEMWSPE+K AW +AYD L AAIK EM
Sbjct:    9 FTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQNPKLKPHAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIKEAVPEMWSPEMKVAWGQAYDHLVAAIKAEM 156          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBL_HORVU (Non-symbiotic hemoglobin OS=Hordeum vulgare GN=HB PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.079e-59
Identity = 110/159 (69.18%), Postives = 133/159 (83.65%), Query Frame = 2
Query:  254 SGSFNVTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVP-EMWSPELKNAWAEAYDQLAAAIKTEMKP 727
            S +     F+EE+EALV+KSW  MKK+S  L L+FFL+IFEIAPSA+++F FL+DSD+P+E NPKLK HA +VFVMTCE+A QLRKAGK+TVRE+ LK LG TH KYGVAD HFEVT++ALLETIKEA+P +MW PE++NAW EAYDQL AAIK EMKP
Sbjct:    2 SAAEGAVVFSEEKEALVLKSWAIMKKDSANLGLRFFLKIFEIAPSARQMFPFLRDSDVPLETNPKLKTHAVSVFVMTCEAAAQLRKAGKITVRETTLKRLGGTHLKYGVADGHFEVTRFALLETIKEALPADMWGPEMRNAWGEAYDQLVAAIKQEMKP 160          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBL2_ORYSJ (Non-symbiotic hemoglobin 2 OS=Oryza sativa subsp. japonica GN=HB2 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.079e-59
Identity = 110/160 (68.75%), Postives = 137/160 (85.62%), Query Frame = 2
Query:  251 NSGSFNVTAFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVP-EMWSPELKNAWAEAYDQLAAAIKTEMKP 727
            N  S    +F+EEQEALV+KSW  MKK+S  + L+FFL+IFE+APSA ++F+FL++SD+P+E+NPKLK HA +VFVMTCE+A QLRKAGKVTVR++ LK LGATHFKYGV D HFEVT++ALLETIKEAVP +MWSP +K+AW+EAY+QL AAIK EMKP
Sbjct:    8 NGVSGGAVSFSEEQEALVLKSWAIMKKDSANIGLRFFLKIFEVAPSASQMFSFLRNSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHFKYGVGDAHFEVTRFALLETIKEAVPVDMWSPAMKSAWSEAYNQLVAAIKQEMKP 167          
BLAST of FC872526 vs. ExPASy Swiss-Prot
Match: HBL_ZEAMP (Non-symbiotic hemoglobin OS=Zea mays subsp. parviglumis GN=HB PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.034e-58
Identity = 110/151 (72.85%), Postives = 131/151 (86.75%), Query Frame = 2
Query:  278 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVP-EMWSPELKNAWAEAYDQLAAAIKTEMKP 727
            F EEQEALV+KSW  MKK++  L L+FFL++FEIAPSAK++F+FL+DSD+P+E+NPKLK HA +VFVMTCE+A QLRKAGKVTVRE+ LK LGATH +YGVAD HFEVT +ALLETIKEA+P +MWS E+K AWAEAY QL AAIK EMKP
Sbjct:   13 FGEEQEALVLKSWAVMKKDAANLGLRFFLKVFEIAPSAKQMFSFLRDSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRETTLKRLGATHLRYGVADGHFEVTGFALLETIKEALPADMWSLEMKKAWAEAYSQLVAAIKREMKP 163          
The following BLAST results are available for this feature:
BLAST of FC872526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HBL1_MEDSA5.706e-6979.87Non-symbiotic hemoglobin 1 OS=Medicago sativa GN=M... [more]
HBP2_CASGL4.831e-6882.24Hemoglobin-2 OS=Casuarina glauca GN=HBII PE=3 SV=1[more]
HBL_TRETO4.090e-6784.21Non-symbiotic hemoglobin OS=Trema tomentosa GN=GLB... [more]
HBL1_GOSHI4.090e-6783.22Non-symbiotic hemoglobin 1 OS=Gossypium hirsutum G... [more]
HBPL_PARRI5.905e-6680.26Non-legume hemoglobin OS=Parasponia rigida PE=1 SV... [more]
HBPL_PARAD5.905e-6680.26Non-legume hemoglobin OS=Parasponia andersonii PE=... [more]
HBL1_ARATH1.778e-6278.38Non-symbiotic hemoglobin 1 OS=Arabidopsis thaliana... [more]
HBL_HORVU1.079e-5969.18Non-symbiotic hemoglobin OS=Hordeum vulgare GN=HB ... [more]
HBL2_ORYSJ1.079e-5968.75Non-symbiotic hemoglobin 2 OS=Oryza sativa subsp. ... [more]
HBL_ZEAMP2.034e-5872.85Non-symbiotic hemoglobin OS=Zea mays subsp. parvig... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CA02ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1CA02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872526 ID=FC872526; Name=FC872526; organism=Citrus clementina; type=EST; length=873bp
GGGGCTCCCTCAATTTTCTGCTCTGCATCTTGTGGCCATTCATAGTGTTG
CTTCAAAAGCTACAACCATGCTACTCTCAAATGATTCTGTCATCTACAAG
TGTGATACAAGGGATTTGAGTAAGATTTTTGCAACCTCAACGTCAAGAGT
TAGGCATCAACAATACGTGAATCTCTCATGGAAGATGAGGGATGGATCAT
TGAAGGGTCTTTTTTGCACAGCTCCAAAATCAATCAGAAGTGTGAGGAGG
AACAGCGGAAGCTTCAACGTGACTGCTTTTACAGAAGAGCAAGAGGCTCT
AGTGGTCAAATCTTGGAATGCCATGAAAAAAAATTCTGGGGAACTTGCTC
TTAAGTTCTTCTTGAGGATCTTTGAGATTGCACCATCAGCAAAGAAGCTG
TTCACTTTTCTCAAAGATTCAGATATTCCTGTGGAGCAGAATCCGAAACT
AAAGCCCCATGCCACGACTGTCTTTGTTATGACGTGTGAATCGGCAGTGC
AACTTAGAAAGGCTGGCAAAGTTACAGTGAGAGAGTCCAATCTAAAAGAC
TTGGGAGCTACCCATTTCAAATACGGAGTTGCTGATGAACATTTTGAGGT
GACAAAGTATGCATTGTTGGAGACCATAAAGGAAGCAGTACCTGAAATGT
GGTCACCAGAGTTGAAGAATGCTTGGGCGGAGGCTTATGATCAACTGGCT
GCCGCCATCAAAACTGAAATGAAGCCTCCTTCATAATTTGCTGATTGAAT
GTAAAAGTGATGCTGTTTCATGGAAAAAAATAATATTGTAAAAATGTCAT
GTAATCATCAATTATCGAATATTGTGTTGATCTAATCTAAGATCCAGTTC
TCTCAAAAAAAAAAAAAAAAAAA
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