FC872549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 5.911e-23 Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 7 VIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLM 237 VI + W PSA + AGR+PGYG+ TNIINGGIECGQGG N+A NRIGF+ T+C G G NLDCY QRP+G L+ Sbjct: 220 VITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.008e-22 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 4 EVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 225 +VII W PSA + A R+PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG+NLDCYNQR +G Sbjct: 178 DVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.317e-22 Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 4 EVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYG 225 +V+ W+PSA + AGRLPGYG+ TN++NGG+ECG+G N V +R+GFF +CG G+ G+NLDCYNQRP+G Sbjct: 170 DVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.246e-22 Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 4 EVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 222 +VI W PS + AGR PGYG+ TNI+NGG+ECG G +D V NRIGF+ +CG FGI G NLDCYNQRP+ Sbjct: 257 DVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 6.535e-22 Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 4 EVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 249 +VI W PS+ + AGRLPGYG TNIINGG+ECG+G + V++RIGF+ +C FGI GDNLDCY+QRP+G +L S+ Sbjct: 235 DVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.535e-22 Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 4 EVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 249 +VI W+PS ++ A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ +M Sbjct: 237 DVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 8.535e-22 Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 1 Query: 7 VIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 222 VI +W PSA + AGR+PGYG TNIINGG+ECG G +D V +RIGF+ +C G+ GDNLDCYNQRPY Sbjct: 246 VITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.456e-21 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 4 EVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 249 +VII W+PS+ + A RLPG+G+ TNIINGG+ECG+G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 243 DVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.456e-21 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 4 EVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 249 +VII W+PSA + A RLPG+G+ TNIINGG+ECG+G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 248 DVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329
BLAST of FC872549 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.243e-21 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 1 Query: 7 VIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 249 VII W PS+ + AGR+PGYG+ TNIINGG+ECG+G N V +RIGF+ +C G+ G+NLDCYNQ P+G + SM Sbjct: 244 VIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324 The following BLAST results are available for this feature:
BLAST of FC872549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872549 ID=FC872549; Name=FC872549; organism=Citrus clementina; type=EST; length=444bpback to top |