FC872558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.773e-76 Identity = 135/150 (90.00%), Postives = 143/150 (95.33%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPLYRESELI++NALGVRNAAQRKLLDELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHELDYLLFIVRDV V PNPDEVAE KYV+RE+LKEL++KADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL E IDMKTIHKL Sbjct: 135 TNTCCSHPLYRESELIQDNALGVRNAAQRKLLDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAEIKYVSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTIHKL 284
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 3.024e-76 Identity = 134/150 (89.33%), Postives = 143/150 (95.33%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPLYRESELI+ENALG RNAAQRKLLDELGI AEDVPVD+F PLGRILYKAPSDGKWGEHELDYLLFIVRDV+VNPNPDEVA+ KYV R+QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDH+EKGT++E DMK+IHKL Sbjct: 85 TNTCCSHPLYRESELIKENALGARNAAQRKLLDELGIPAEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKYVTRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTMHEAADMKSIHKL 234
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI2_CLABR (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri GN=IPI2 PE=3 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 3.950e-76 Identity = 135/150 (90.00%), Postives = 144/150 (96.00%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AEDVPVDEFTPL R+LYKAPSDGKWGEHELDYLLFIVRDV+V+PNPDEVAE KYVNREQLKELL+KADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL+E +DMK+IHKL Sbjct: 137 TNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPLSRMLYKAPSDGKWGEHELDYLLFIVRDVAVHPNPDEVAEIKYVNREQLKELLKKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKSIHKL 286
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.960e-75 Identity = 133/150 (88.67%), Postives = 142/150 (94.67%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AEDVPVDEFTP+ R+LYKAPSDGKWGEHELDYLLFIVRDV ++PNPDEVA+ KYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL+E +DMKTIH L Sbjct: 141 TNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPNPDEVADIKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKTIHNL 290
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 9.729e-75 Identity = 129/151 (85.43%), Postives = 143/151 (94.70%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKLT 458 TNTCCSHP YRESEL++ENALGVRNAAQRKLLDELGI AEDVPVD+F PLGR+LYKAPSDGKWGEHELDYLLFI+RDV+V+PNPDEVA+ KYVN++QLK+LLRK DAGEEGLKLSPWFRLVV+NFLFKWWDH+EKGTL + DMKTIHKLT Sbjct: 159 TNTCCSHPRYRESELVDENALGVRNAAQRKLLDELGIPAEDVPVDQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPNPDEVADVKYVNQDQLKDLLRKVDAGEEGLKLSPWFRLVVENFLFKWWDHVEKGTLQDATDMKTIHKLT 309
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI1_ARATH (Isopentenyl-diphosphate Delta-isomerase I OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.076e-73 Identity = 128/150 (85.33%), Postives = 139/150 (92.67%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPLYRESELIEEN LGVRNAAQRKL DELGI AEDVPVDEFTPLGR+LYKAPSDGKWGEHE+DYLLFIVRDV + PNPDEVAE KYV+RE+LKEL++KADAG+E +KLSPWFRLVVDNFL KWWDH+EKGT+ E DMKTIHKL Sbjct: 84 TNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDVPVDEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKYVSREELKELVKKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIHKL 233
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2) HSP 1 Score: 273.863 bits (699), Expect = 6.972e-73 Identity = 127/150 (84.67%), Postives = 140/150 (93.33%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI AED+PVD+F PL RILYKAPSDGKWGEHELDYLLFI+RDV+++PNPDEVAE KY+NR+ LKELLRKADA EEG+KLSPWFRLVVDNFLFKWWDH+EKG+L + DMKTIHKL Sbjct: 138 TNTCCSHPLYRESELIDENCLGVRNAAQRKLLDELGIPAEDLPVDQFIPLSRILYKAPSDGKWGEHELDYLLFIIRDVNLDPNPDEVAEVKYMNRDDLKELLRKADAEEEGVKLSPWFRLVVDNFLFKWWDHVEKGSLKDAADMKTIHKL 287
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI1_MACFA (Isopentenyl-diphosphate Delta-isomerase 1 OS=Macaca fascicularis GN=IDI1 PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.584e-43 Identity = 82/150 (54.67%), Postives = 114/150 (76.00%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPL EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ + YV++E+LKELL+KA GE +K++PWF+++ + FLFKWWD+L LN+ +D + IH++ Sbjct: 82 TNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILFVRKNVTLNPDPNEIKSFCYVSKEELKELLKKAANGE--IKITPWFQIIAETFLFKWWDNLNH--LNQFVDHEKIHRM 227
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 7.519e-43 Identity = 81/150 (54.00%), Postives = 114/150 (76.00%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPL EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y YV++E+LKELL+KA +GE +K++PWF+++ + FLFKWWD+L LN+ +D + I+++ Sbjct: 82 TNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAETFLFKWWDNLNH--LNQFVDHEKIYRI 227
BLAST of FC872558 vs. ExPASy Swiss-Prot
Match: IDI1_HUMAN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1 PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.675e-42 Identity = 81/150 (54.00%), Postives = 114/150 (76.00%), Query Frame = 3 Query: 6 TNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 455 TNTCCSHPL +EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y YV++E+LKELL+KA +GE +K++PWF+++ FLFKWWD+L LN+ +D + I+++ Sbjct: 82 TNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEELKELLKKAASGE--IKITPWFKIIAATFLFKWWDNLNH--LNQFVDHEKIYRM 227 The following BLAST results are available for this feature:
BLAST of FC872558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872558 ID=FC872558; Name=FC872558; organism=Citrus clementina; type=EST; length=775bpback to top |