FC872640

Overview
NameFC872640
Unique NameFC872640
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length309
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10021 contig Ccv1_Contig10021:1..309. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC872640 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 1 
Query:    4 GSGEMRVFASEKPRACKIDGNEVAFEYEGHMVAIQVPWSSPSGLSVIEYLF 156
            G+GE RV+AS+KP +C IDG  V F YE  MV +QVPWS P GLS I+YLF
Sbjct:  733 GAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMVQVPWSGPDGLSSIQYLF 783
The following BLAST results are available for this feature:
BLAST of FC872640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RFS5_ARATH3.020e-1262.75Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB1CH11ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1CH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872640 ID=FC872640; Name=FC872640; organism=Citrus clementina; type=EST; length=309bp
GGGGGAAGTGGTGAAATGAGAGTCTTTGCTTCTGAGAAACCAAGAGCTTG
CAAGATTGATGGAAACGAAGTTGCATTTGAGTATGAAGGCCACATGGTTG
CTATTCAAGTGCCGTGGTCTAGCCCTTCTGGTTTATCTGTAATTGAGTAC
TTATTTTAGAGCTAGACCAGGCTATATCAATGAGAGTCCGTTATCTATAT
ATTGCGCATTTTGATGCCAAATTATGAGCAAGTTTAACTAAGTGTATTCA
AGTACAATAAAAGTACAGTAAGATTTATTACTAAAAAAAAAAAAAAAAAA
AAAAAAAAA
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