FC872645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872645 vs. ExPASy Swiss-Prot
Match: GBF1_ARATH (G-box-binding factor 1 OS=Arabidopsis thaliana GN=GBF1 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 1.276e-36 Identity = 83/142 (58.45%), Postives = 97/142 (68.31%), Query Frame = 2 Query: 200 TNLNIGMDLWNTSPAAAGAAKMRTNXXXXXXXXXXXXIMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLSSENNSIKEDLSRLCGPEAVANLEQSNPTQSSGEEEN 625 TNLNIGMDLW++ ++DERELKRQKRKQSNRESARRSRLRKQAECE+LQ RVE+LSNEN++LRDELQRLS EC+KL SENNSI+++L R+ G EAVANLEQ+ GE N Sbjct: 200 TNLNIGMDLWSSQAGVP--------------------------VKDERELKRQKRKQSNRESARRSRLRKQAECEQLQQRVESLSNENQSLRDELQRLSSECDKLKSENNSIQDELQRVLGAEAVANLEQNAAGSKDGEGTN 315
BLAST of FC872645 vs. ExPASy Swiss-Prot
Match: CPRF3_PETCR (Light-inducible protein CPRF3 OS=Petroselinum crispum GN=CPRF3 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.666e-26 Identity = 61/102 (59.80%), Postives = 81/102 (79.41%), Query Frame = 2 Query: 311 IMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLSSENNSIKEDLSRLCGPEAVANLEQSNPTQSSGE 616 ++PDQ + DERELKRQ+RKQSNRESARRSRLRKQA+ +ELQ R++ LS ENR LR LQR+SE C +++SEN+SIKE+L R GP+ + L + N +++GE Sbjct: 185 MLPDQRVNDERELKRQRRKQSNRESARRSRLRKQAKSDELQERLDNLSKENRILRKNLQRISEACAEVTSENHSIKEELLRNYGPDGLTRLPR-NLQEAAGE 285
BLAST of FC872645 vs. ExPASy Swiss-Prot
Match: HBP1A_WHEAT (Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23 Identity = 68/148 (45.95%), Postives = 86/148 (58.11%), Query Frame = 2 Query: 197 ATNLNIGMDLWN---TSPAAAGAAKMRTNXXXXXXXXXXXXIMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLSSENNSIKEDLSRL---CGPEAVANLEQSNPTQSSGEEE 622 ATNLNIGMD W +SP A K+ + +QW DERELK+QKRK SNRESARRSRLRKQAECEEL R E L +EN +LR EL R+ +E E+L S+N S+K L G +AV ++ + T ++ Sbjct: 213 ATNLNIGMDYWGATGSSPVPAMRGKVPSGSARG-----------EQW--DERELKKQKRKLSNRESARRSRLRKQAECEELGQRAEALKSENSSLRIELDRIKKEYEELLSKNTSLKAKLGESGGGGGSDAVPDMNERGDTNGGSHQK 347
BLAST of FC872645 vs. ExPASy Swiss-Prot
Match: TAF1_TOBAC (Transcriptional activator TAF-1 (Fragment) OS=Nicotiana tabacum GN=TAF1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 2 Query: 320 DQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLSSENNSIKEDL 547 + W+Q+ERELKR+KRKQSNRESARRSRLRKQAE EEL RV++L+ EN L+ E+ +L E EKL EN ++ E L Sbjct: 186 EAWLQNERELKREKRKQSNRESARRSRLRKQAEAEELAIRVQSLTAENMTLKSEINKLMENSEKLKLENAALMERL 261
BLAST of FC872645 vs. ExPASy Swiss-Prot
Match: GBF3_ARATH (G-box-binding factor 3 OS=Arabidopsis thaliana GN=GBF3 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.200e-18 Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 311 IMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLSSENNSIKEDL 547 + P+ W+Q+ERELKR++RKQSNRESARRSRLRKQAE EEL +VE L+ EN LR EL +L+E+ +KL N ++ + L Sbjct: 248 VPPETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEALTAENMALRSELNQLNEKSDKLRGANATLLDKL 326
BLAST of FC872645 vs. ExPASy Swiss-Prot
Match: EMBP1_WHEAT (DNA-binding protein EMBP-1 OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.326e-17 Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 197 ATNLNIGMDLWNTSPAAA------GAAKMRTNXXXXXXXXXXXXIMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLSSENNSI 535 A NLNIGMD + SP++ AA ++N DERELKR++RKQSNRESARRSRLRKQ ECEEL +V L+ N LR EL +L ++C+ + +EN + Sbjct: 209 APNLNIGMDPLSASPSSLVQGEVNAAASSQSNASLSQ--------------MDERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKKDCKTMETENKKL 313
BLAST of FC872645 vs. ExPASy Swiss-Prot
Match: GBF2_ARATH (G-box-binding factor 2 OS=Arabidopsis thaliana GN=GBF2 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 2 Query: 314 MPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLSSENNSIKEDLSRLCGPEA---VANLEQSNPTQSSGEEENS*LEYTPRTTIITSS 670 +P W +E+E+KR+KRKQSNRESARRSRLRKQAE E+L +V+ L EN +LR +L +L+ E EKL EN +I + L + ++ ++++N S ++ L +P T + +S Sbjct: 241 VPQPW--NEKEVKREKRKQSNRESARRSRLRKQAETEQLSVKVDALVAENMSLRSKLGQLNNESEKLRLENEAILDQLKAQATGKTENLISRVDKNNSVSGSKTVQHQLLNASPITDPVAAS 360
BLAST of FC872645 vs. ExPASy Swiss-Prot
Match: CPRF1_PETCR (Common plant regulatory factor 1 OS=Petroselinum crispum GN=CPRF1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 43/78 (55.13%), Postives = 62/78 (79.49%), Query Frame = 2 Query: 311 IMP-DQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLSSENNSIKE 541 +MP D W+ ++R+LKR++RKQSNRESARRSRLRKQAE EEL +V++L+ EN L+ E+ RL+ EKL+++N+ + E Sbjct: 257 MMPNDSWLHNDRDLKRERRKQSNRESARRSRLRKQAEAEELAIKVDSLTAENMALKAEINRLTLTAEKLTNDNSRLLE 334 The following BLAST results are available for this feature:
BLAST of FC872645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872645 ID=FC872645; Name=FC872645; organism=Citrus clementina; type=EST; length=868bpback to top |