FC872691
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_DICDI (Protein tssc1 homolog OS=Dictyostelium discoideum GN=tssc1 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.239e-40 Identity = 99/323 (30.65%), Postives = 172/323 (53.25%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG----------------------ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWS-LDCSNKNAQIQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW-LVSTSNHDELPSESLVESPNQRANS 925 YGL + R +S + A+ D FL GT +L+EENE+ LL G + C +F HP EI ++SCPFD +F +V++T + +++W+I E + +E + L H G I +L SG ++ ++S+D+ NI LWS +D N+ I+ G L LS G+ +P+ N +A + +++ WD R+ +T S++ AH +R++D++ K + L++A D+ + +WD R + P++ GH HW W+ N +D I+++ +D+TV LW L S S+ SE+ + + N++ +S Sbjct: 14 YGLSQKTRALSHITAEADVNRFLVGTTALREENEIALLEAKEG-EGVRCLSIFPHPKEIHSITSCPFDSSLFFSVYNTSGGGNNNSNNTNNNDNTNNNTNNNDFKSSLWRINE-----SMDSIEELFELKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWSKIDDQNEPTVIKQ---FGNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKETFSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDPVKIFSGHNHWIWSAKFNRYHDQLIITSSSDNTVKLWNLYSLSS--AFNSENNISNSNEQQHS 325
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_DANRE (Protein TSSC1 OS=Danio rerio GN=tssc1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.336e-39 Identity = 101/318 (31.76%), Postives = 169/318 (53.14%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY---------GQLNSPQ-LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV---NLWLVSTSNHDELPSESLVESPNQ 913 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S P D+ + +T ++ T ES AA+W++P + N+PQ LE + LD AH G + CVLW G +++S+ E ++ LW L S+ A I S + G L + + G W PH + +A +++++ WDLRSM + IE+AH VR++D++ K++ L + D+ + WD+R + P++ L H+HW W+V N +D +L+A +DS V N+ +S+ L + + P + Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLKFDNQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYNKTSESRVLTCAAVWRMPPEWESGNHESPDDSSNNPQTLELLCHLDNSAH-GSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGKGQLKF-TAGKWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDVRHISEPVKCLEEHSHWVWSVRYNHSHDQLLLTASSDSRVILSNMVSISSEPFGHLVDDDDLSDPEE 324
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_RAT (Protein TSSC1 OS=Rattus norvegicus GN=Tssc1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.583e-38 Identity = 98/317 (30.91%), Postives = 165/317 (52.05%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY--GQLNSPQ--------LERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV---NLWLVSTSNHDELPSESLVESPNQ 913 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP+ LE + LD G + CV+W G K++S+ + +I LW L S+ A + S + G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V N+ +S+ L + V P + Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADKGVLATCYNKTSDSRVQACAAVWRMPKELESGSHESPEDPASTAQTLELLCHLDNGAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSAALEGRGQLKFTSG-RWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDVSDPEE 324
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_XENTR (Protein TSSC1 OS=Xenopus tropicalis GN=tssc1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.515e-38 Identity = 94/293 (32.08%), Postives = 155/293 (52.90%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG----AAIWQIP-ELYG---------QLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 847 YGL++QAR ++ A+TD FL GT SL+ +N++H++ + L H EIW +S+ P D+ + +T ++ AA+W+IP EL G N+ LE + LD AH G + CV W G KL+S+ + + +W L S+ + + S + G L + S G W P H+ VA +++++ WD+RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALAAQTAETDAIRFLVGTQSLRYDNQIHVIDFDDENNIINKNILLHHAGEIWQISASPADRNVLATCYNKISDSKVLTCAAVWRIPKELQGGNHESPDDTSSNAQALELLCHLDNTAH-GNMACVTWEPLGDGKKLLSLADNYLMIWDLQESSTKSVLSSSVTLEGKGQLRFTS-GKWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_MOUSE (Protein TSSC1 OS=Mus musculus GN=Tssc1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.814e-38 Identity = 97/317 (30.60%), Postives = 164/317 (51.74%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY--GQLNSPQ--------LERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV---NLWLVSTSNHDELPSESLVESPNQ 913 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD G + CV+W G K++S+ + +I LW L S+ A + S + G L + + G W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V N+ +S+ L + V P + Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADKGVLATCYNKTTDSRVQACAAVWRMPKELESGSHESPDDPASTAQTLELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKF-TAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDVSDPEE 324
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_XENLA (Protein TSSC1 OS=Xenopus laevis GN=tssc1 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.282e-37 Identity = 91/292 (31.16%), Postives = 153/292 (52.40%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG----AAIWQIP-ELYG---------QLNSPQLERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 847 YGL++QAR ++ A+TD FL GT SL+ +N++H++ + L H EIW + + P D+ + +T ++ AA+W+IP EL G N+ LE + LD+ G + CV W G KL+S+ + + +W L S+ + + S + G L + SG W PH + VA +++++ WD+RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLRYDNQIHVIDFDDENNIINKNVLLHHAGEIWQIGASPADRNVLATCYNKISDSKVMTCAAVWRIPKELQGGNHESPDDTSSNAQSLELLCHLDSTAHGNMACVTWEPLGDGKKLLSLADNYLLIWDLQESSTKSVLSSSATLEGKGQLRFTSG-KWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_HUMAN (Protein TSSC1 OS=Homo sapiens GN=TSSC1 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.856e-37 Identity = 97/293 (33.11%), Postives = 156/293 (53.24%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 847 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLTTCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 299
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_GECJA (Protein TSSC1 OS=Gecko japonicus GN=TSSC1 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.417e-36 Identity = 94/293 (32.08%), Postives = 155/293 (52.90%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY----------GQLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 847 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T +S T +S AA+W++P+ N+ LE + LD AH G + VLW G KL+S+ + ++ LW L S+ A + + + G L + SG W PH + VA +++++ WD+R+M + IE AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L+A +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADKGVLATCYSKTSDSKVMTCAAVWRMPKELESGSHESPDDSSSNAQTLELLCHLDNTAH-GNMAGVLWEPMGDGKKLISLADNHLLLWDLQESSSKAVLSNSAALEGKGQLKFTSG-RWSPHHNCTQVATANDTAIRGWDIRTMSQIYCIESAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVSDPVKTLEEHSHWVWNVRYNHSHDQLVLTASSDSRVIL 299
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_MACFA (Protein TSSC1 OS=Macaca fascicularis GN=TSSC1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 3.157e-36 Identity = 95/293 (32.42%), Postives = 155/293 (52.90%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 847 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD AH + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD R+M + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLATCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-SNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLGGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTRTMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 299
BLAST of FC872691 vs. ExPASy Swiss-Prot
Match: TSSC1_PONAB (Protein TSSC1 OS=Pongo abelii GN=TSSC1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.016e-34 Identity = 97/320 (30.31%), Postives = 157/320 (49.06%), Query Frame = 2 Query: 38 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG-------ESYGA------------------------AIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSKQS---SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 847 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ +S+GA A+W++P+ G SP LE + LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADRGVLATCYNRTFCCVLSLDSFGALGKSSAQLFIALATSSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTSG-RWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 326 The following BLAST results are available for this feature:
BLAST of FC872691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872691 ID=FC872691; Name=FC872691; organism=Citrus clementina; type=EST; length=933bpback to top |