FC872726

Overview
NameFC872726
Unique NameFC872726
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC872726_ssr517 microsatellite FC872726_ssr517:517..528. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10044 contig Ccv1_Contig10044:1..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.368e-55
Identity = 100/159 (62.89%), Postives = 128/159 (80.50%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 480
            DAY+ +DEMR  G+GPN+RTYDI+LHHLI+  R++EAY V++ MS     EPTVSTYEI+VRMFC   ++DMA++IWDEMK +GVLP MHM+S+LI +LCHE+KLD+AC+YF EMLD+GIRPPG +FS LKQ L DEG ++    L  K+D+LRKT LV
Sbjct:  355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKTQLV 509          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.653e-30
Identity = 63/160 (39.38%), Postives = 98/160 (61.25%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 483
            + YR++ EM+  G+ PNS++ +I+L HLI+ G  +EA+ VF++M +    EP   TY +V++MFC   +++ A ++W  M+ +GV P MH +S LIN LC E     AC   +EM+++GIRP G  F  L+Q L  E  E+    L +K++ L   PL D
Sbjct:  360 NVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV--CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEPLCD 517          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17
Identity = 50/152 (32.89%), Postives = 81/152 (53.29%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 459
            +A +++ EM + GI PN+ TY+ ++    K  R EEA  +   M  K G +P + T+ I++  +C   ++D  + ++ EM  RGV+     Y+TL+   C   KL+ A K FQEM+   +RP    +  L   L D G  E A+ +  KI+K
Sbjct:  351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501          

HSP 2 Score: 72.4034 bits (176), Expect = 2.030e-12
Identity = 43/157 (27.39%), Postives = 79/157 (50.32%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            D  +++ +M K  I PN  T+ +++   +K G+  EA  + K M ++ G  P   TY  ++  FC   +++ A+++ D M ++G  P +  ++ LIN  C  +++DD  + F+EM   G+      ++ L Q     G  E A  L Q++   R  P
Sbjct:  316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471          

HSP 3 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 41/138 (29.71%), Postives = 69/138 (50.00%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            DA  ++D M + G  PN  TY  VL+ + K+G+T  A  + ++M  +      V  Y I++   C +  +D A  +++EM+ +G    +  Y+TLI   C+  + DD  K  ++M+   I P    FS L  +   EG
Sbjct:  211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16
Identity = 50/156 (32.05%), Postives = 82/156 (52.56%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 471
            +A  + +EM   GI P++ TY+ ++    K     EA  +F  M  K G EP + TY I++  +C   +VD  MR++ E+ ++G++P    Y+TL+   C   KL+ A + FQEM+  G+ P    +  L   L D G    A+ + +K+ K R T
Sbjct:  333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487          

HSP 2 Score: 76.2554 bits (186), Expect = 1.406e-13
Identity = 44/138 (31.88%), Postives = 73/138 (52.90%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 417
            +A  ++D M + G  P+  TY  VL+ L K+G +  A  +F++M  +   + +V  Y IV+   C +   D A+ +++EM+ +G+   +  YS+LI  LC++ K DD  K  +EM+   I P    FS L      EG
Sbjct:  193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329          

HSP 3 Score: 70.4774 bits (171), Expect = 7.713e-12
Identity = 41/157 (26.11%), Postives = 85/157 (54.14%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            D  R+  E+   G+ PN+ TY+ ++    ++G+   A  +F+ M  + G  P+V TY I++   C N +++ A+ I+++M+   +   + +Y+ +I+ +C+  K+DDA   F  + D G++P    ++ +   L  +G    A +L +K+ +   TP
Sbjct:  403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.317e-16
Identity = 49/146 (33.56%), Postives = 79/146 (54.11%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 441
            +AYR++ EM   G  P+  TY+ +++     G+ E+A +V + M  K G  P V +Y  V+  FC +  VD A+R+  EM  +G+ P    YS+LI   C + +  +AC  ++EML +G+ P    ++ L  A   EG  E A+ L
Sbjct:  398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542          

HSP 2 Score: 81.6481 bits (200), Expect = 3.346e-15
Identity = 44/156 (28.21%), Postives = 85/156 (54.49%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            A   +D+MR  G+ PN RTY  ++    + G   EAY V + M+   G  P+V TY  ++   C   +++ A+ + ++MK +G+ P +  YST+++  C    +D+A +  +EM++ GI+P    +S+L Q   ++   + A  L +++ ++   P
Sbjct:  364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518          

HSP 3 Score: 72.4034 bits (176), Expect = 2.030e-12
Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = 1
Query:   40 GIGPNSRTYDIVLHHLIKAGRTEE-AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQ 447
            G  P   +Y+ VL   I++ R    A +VFK M       P V TY I++R FC+   +D+A+ ++D+M+ +G LP +  Y+TLI+  C   K+DD  K  + M   G+ P    ++ +   L  EG M+E + VL +
Sbjct:  164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300          

HSP 4 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 453
            DA  ++++M++ G+ P+  +Y  VL    ++   +EA  V + M  K G +P   TY  +++ FC   +   A  +++EM   G+ P    Y+ LIN+ C E  L+ A +   EM++ G+ P    +S L   L  +     A  L  K+
Sbjct:  433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP218_ARATH (Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.805e-16
Identity = 50/160 (31.25%), Postives = 83/160 (51.88%), Query Frame = 1
Query:    4 DAYRMMDEMRK-CGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 480
            DA ++ D M K     PNS +Y I++H L + GR EEA+ +  +M  K G +P+  TY ++++  C    +D A  ++DEM  RG  P +H Y+ LI+ LC + K+++A    ++M+   I P    ++ L      +G    A  L   ++K    P V
Sbjct:  248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406          

HSP 2 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = 1
Query:    7 AYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 456
            A+ + DEM   G  PN  TY +++  L + G+ EEA  V ++M  K    P+V TY  ++  +C + +V  A  +   M+ R   P +  ++ L+  LC   K   A    + MLD G+ P    ++ L   L  EG   TA  L   ++
Sbjct:  320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV-KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.346e-15
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 1
Query:   10 YRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFSNLKQALRDEGME 423
            Y ++D+MRK G+ P+  TY  ++    K  + EE   + ++M R+ G  P +  Y +V+R+ C   +V  A+R+W+EM+A G+ P +  +  +IN    +  L +AC +F+EM+  GI      G L S L   +RD+ +E
Sbjct:  362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR-GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.707e-15
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLKQALRDEGMEETAVVLAQKI 453
            +AY +++  R  G  P+   Y+ +L  L K G+ +EA  VF+ M  K    P +STY I++ M C   ++D A  + D M+  G+ P +   + +++ LC   KLD+AC  F+EM D  +  P ++ F +L   L   G  + A  + +K+
Sbjct:  326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473          

HSP 2 Score: 75.0998 bits (183), Expect = 3.132e-13
Identity = 45/153 (29.41%), Postives = 80/153 (52.29%), Query Frame = 1
Query:   16 MMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            M +E++     P++R+Y I++H LIKAG   E Y +F  M ++ G       Y IV+  FC   +V+ A ++ +EMK +G  P +  Y ++I+ L   D+LD+A   F+E     I     ++S+L       G  + A ++ +++ +   TP
Sbjct:  539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690          

HSP 3 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 43/157 (27.39%), Postives = 82/157 (52.23%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 474
            + Y +   M++ G   ++R Y+IV+    K G+  +AY + + M  K G EPTV TY  V+       ++D A  +++E K++ +   + +YS+LI+      ++D+A    +E++  G+ P    +++L  AL        A+V  Q + +L+ TP
Sbjct:  570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 1
Query:   25 EMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 456
            EM K G  P+S TY  ++  L + GR +EA  +F  M  K    PTV TY  ++   C +  VD AMR  +EMK++G+ P +  YS+L++ LC + +   A + F+ M+  G RP    ++ L   L  E   + AV L  +++
Sbjct:  182 EMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324          

HSP 2 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 41/135 (30.37%), Postives = 72/135 (53.33%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN-AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 405
            D+ R+  +M+     P+ + Y  VL  L++  +   A+  +K M R+ G  PTV++  ++++  C N   VD  ++I+ EM  RG  P  + Y TLI+ LC   ++D+A K F EM++    P    +++L   L
Sbjct:  104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM-REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237          
BLAST of FC872726 vs. ExPASy Swiss-Prot
Match: PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.735e-15
Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 1
Query:    4 DAYRMMDEMRKCGIGPNSRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 369
            +A ++ DEM + G+ P  RTY    H  ++  RT EE + +  +M RK G EPTV TY +++R  C     D  + +WDEMK + V P +  Y  +I+ L    K+++A  Y++EM D G+RP
Sbjct:  391 EAKQVFDEMLEKGLFPTIRTY----HAFMRILRTGEEVFELLAKM-RKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508          
The following BLAST results are available for this feature:
BLAST of FC872726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PP112_ARATH7.368e-5562.89Pentatricopeptide repeat-containing protein At1g71... [more]
PP129_ARATH1.653e-3039.38Pentatricopeptide repeat-containing protein At1g77... [more]
PPR39_ARATH7.964e-1732.89Pentatricopeptide repeat-containing protein At1g12... [more]
PP247_ARATH1.358e-1632.05Pentatricopeptide repeat-containing protein At3g22... [more]
PP407_ARATH2.317e-1633.56Pentatricopeptide repeat-containing protein At5g39... [more]
PP218_ARATH8.805e-1631.25Pentatricopeptide repeat-containing protein At3g07... [more]
PP275_ARATH3.346e-1532.62Pentatricopeptide repeat-containing protein At3g49... [more]
PP217_ARATH5.707e-1531.13Pentatricopeptide repeat-containing protein At3g06... [more]
PP418_ARATH7.454e-1534.03Pentatricopeptide repeat-containing protein At5g46... [more]
PP383_ARATH9.735e-1537.40Pentatricopeptide repeat-containing protein At5g15... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1DE04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1DE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872726 ID=FC872726; Name=FC872726; organism=Citrus clementina; type=EST; length=609bp
GGGGATGCATATAGGATGATGGATGAGATGAGGAAGTGTGGCATTGGTCC
AAATTCTCGAACTTATGATATAGTTCTTCATCACCTAATAAAGGCTGGAA
GAACAGAAGAGGCTTATTCGGTTTTTAAGAGAATGAGTCGCAAGCCAGGG
ACTGAGCCAACTGTCAGTACCTATGAGATTGTAGTCAGGATGTTTTGCTA
CAACGCCCAAGTAGATATGGCGATGAGGATTTGGGATGAGATGAAGGCAA
GGGGAGTTCTTCCTGTAATGCACATGTACTCGACATTGATTAATAGCTTG
TGCCATGAGGACAAGCTAGATGATGCTTGCAAGTACTTTCAAGAGATGCT
GGATATTGGTATTCGACCTCCTGGGCAGTTGTTTAGTAATCTAAAACAAG
CTCTTCGAGATGAGGGAATGGAGGAAACTGCTGTTGTTTTGGCTCAGAAG
ATTGACAAATTGAGGAAAACTCCATTAGTTGATAGAGGTCAATGATAGGA
GAGACTCTAAAGCCCCTTTATTTATTTATTTTATGAATTAGCTCCAGAAC
AAGCTTTCAATGAACAGAGAGAAGTTCTGACAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
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