FC872764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872764 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2) HSP 1 Score: 256.529 bits (654), Expect = 1.397e-67 Identity = 140/289 (48.44%), Postives = 174/289 (60.21%), Query Frame = 3 Query: 6 GECKHFASAVASARFALPGPSEKGIVTSEFGNGIGQSPPLVVNPIPV-IRIEADPVSESGYQINNCEPIIEEPRSPGPQCXXXXXXXXXXXXXXXXXXXXXPTLRLQEREFKENFPNFMEMNKVMLQD--SSALVALTAEAASVPTRKLKRCAHLRTEHHVYVLPDAHELLRGFDRRDPDDPSPYLLAIWSPGEPPNSVGSPQYRCNSKDS-KLCNSEICYSCNSVCERNAGIVRGTILIPCRTANRGRFPLNGTYFQVNEVFADHETSHHPINVPRHTIANLRREIVW 860 GEC+HFASA ASAR ALP P E+ + ++ PP+ + I + + +E S + NCEPIIEEP SPG +C PT++L +F ME N + + S ALVAL S+PT KLK + LRTEH VY LPD+H LL G D+R+PDDPSPYLLAIW+PGE NS P+ +C K S K+C E C CNS+ E N+ VRGT+LIPCRTA RG FPLNGTYFQVNE+FADHE+S PI+VPR I +L R V+ Sbjct: 1643 GECRHFASAYASARLALPAPEERSLTSATIPVPPESYPPVAIPMIELPLPLEKSLASGAPSNRENCEPIIEEPASPGQECTEITESDIEDAYYNEDPDEI-PTIKLNIEQFGMTLREHMERNMELQEGDMSKALVALHPTTTSIPTPKLKNISRLRTEHQVYELPDSHRLLDGMDKREPDDPSPYLLAIWTPGETANSAQPPEQKCGGKASGKMCFDETCSECNSLREANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNELFADHESSLKPIDVPRDWIWDLPRRTVY 1930
BLAST of FC872764 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 5.495e-64 Identity = 147/292 (50.34%), Postives = 176/292 (60.27%), Query Frame = 3 Query: 6 GECKHFASAVASARFALPGPSEKGIVTSEFGNGIGQSPPLVVNPIPVIRIEADPV---SESGYQINNCEPIIEEPRSPGPQCXXXXXXXXXXXXXXXXXXXXXPTLRLQEREFKENFPNFMEMNKVMLQD---SSALVALTAEAASVPTRKLKRCAHLRTEHHVYVLPDAHELLRGFDRRDPDDPSPYLLAIWSPGEPPNSVGSPQYRCNSK-DSKLCNSEICYSCNSVCERNAGIVRGTILIPCRTANRGRFPLNGTYFQVNEVFADHETSHHPINVPRHTIANLRREIVW 860 GEC+HFASA ASAR ALP +EKG+ T + ++P + P P R + V SE ++ CEPIIEEP SP P+ PT+RL F N ME NK LQD SSALVALTAE AS+P KLK + LRTEH VY LPD H LL ++R+PDDP YLLAIW+PGE +S+ C + + LC+ E C+SCNS+ E + IVRGTILIPCRTA RG FPLNGTYFQVNEVFADH +S +PINVPR I L R V+ Sbjct: 1052 GECRHFASAFASARLALPS-TEKGMGTPD------KNPLPLHLPEPFQREQGSEVVQHSEPAKKVTCCEPIIEEPASPEPETAEVSIADIEEAFFEDPEEI--PTIRLNMDAFTSNLKKIMEHNKE-LQDGNMSSALVALTAETASLPMPKLKNISQLRTEHRVYELPDEHPLLAQLEKREPDDPCSYLLAIWTPGETADSIQPSVSTCIFQANGMLCDEETCFSCNSIKETRSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHASSLNPINVPRELIWELPRRTVY 1333
BLAST of FC872764 vs. ExPASy Swiss-Prot
Match: DML2_ARATH (DEMETER-like protein 2 OS=Arabidopsis thaliana GN=DML2 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.227e-55 Identity = 127/294 (43.20%), Postives = 167/294 (56.80%), Query Frame = 3 Query: 9 ECKHFASAVASARFALPGPSEKGIVTSEFGNGIGQSPPLVVNPIPVIRIEADPVSESGYQINNCEPIIEEPRSPGPQCXXXXXXXXXXXXXXXXXXXXX-------PTLRLQEREFKENFPNFMEMNKVMLQDSSALVALTAEAASVPTRKLKRCAHLRTEHHVYVLPDAHELLRGFDRRDPDDPSPYLLAIWSPGEPPNSVGSPQYRCNSKDSK--LCNSEICYSCNSVCERNAGIVRGTILIPCRTANRGRFPLNGTYFQVNEVFADHETSHHPINVPRHTIANLRREIVWL 863 EC+H++SA ASAR ALP P E + + P+VVN P + + + E+ + NCEPIIEEP SP P+ PT+ L + + + + +NK S LV L+ AA++P RKLK LRTEHHV+ LPD H +L GF+RR+ +D PYLLAIW+PGE NS+ P+ RC +S LCN C+ CN E + VRGTILIPCRTA RG FPLNGTYFQ NEVFADH++S +PI+VP I +L+R + +L Sbjct: 962 ECRHYSSARASARLALPEPEESDRTSVMIHERRSKRKPVVVNFRPSLFLYQEKEQEA-QRSQNCEPIIEEPASPEPEYIEHDIEDYPRDKNNVGTSEDPWENKDVIPTIILNK---EAGTSHDLVVNKEA-GTSHDLVVLSTYAAAIPRRKLKIKEKLRTEHHVFELPDHHSILEGFERREAEDIVPYLLAIWTPGETVNSIQPPKQRCALFESNNTLCNENKCFQCNKTREEESQTVRGTILIPCRTAMRGGFPLNGTYFQTNEVFADHDSSINPIDVPTELIWDLKRRVAYL 1250
BLAST of FC872764 vs. ExPASy Swiss-Prot
Match: DML3_ARATH (DEMETER-like protein 3 OS=Arabidopsis thaliana GN=DML3 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.478e-48 Identity = 120/292 (41.10%), Postives = 155/292 (53.08%), Query Frame = 3 Query: 9 ECKHFASAVASARFALPGPSEKGIVTSEFGNGIGQSPPLVVNPIPVIRIEADPVSESGYQINNC-EPIIEEPRSPGPQCXXXXXXXXXXXXXXXXXXXXXPTLRLQEREFKENFPNFMEMNKVMLQD----SSALVALTAEAASVPT---RKLKRCAHLRTEHHVYVLPDAHELLRGFDRRDPDDPSPYLLAIWSPGEPPNSVGSPQYRCNSKDSKLCNSEICYSCNSVCERNAGIVRGTILIPCRTANRGRFPLNGTYFQVNEVFADHETSHHPINVPRHTIANLRREIVW 860 ECK+FASA S++ L P EK + F N Q + V+ I + + VS C +P++E P SP + P + K++ + + ++ M S ALV T E A +P RK+K LRTEH VYVLPD HELL F+RR DDPSPYLLAIW PGE +S P+ +C+S SKLC + C C ++ E+N+ I RGTILIPCRTA RG FPLNGTYFQ NEVFADHETS +PI R L + ++ Sbjct: 693 ECKYFASAYVSSKVLLESPEEKMHEPNTFMNAHSQD--VAVDMTSNINLVEECVSSGCSDQAICYKPLVEFPSSPRAEIPESTDIEDVPFMNLYQSYASVPKIDFDLDALKKSVEDALVISGRMSSSDEEISKALVIPTPENACIPIKPPRKMKYYNRLRTEHVVYVLPDNHELLHDFERRKLDDPSPYLLAIWQPGETSSSFVPPKKKCSSDGSKLCKIKNCSYCWTIREQNSNIFRGTILIPCRTAMRGAFPLNGTYFQTNEVFADHETSLNPIVFRRELCKGLEKRALY 982 The following BLAST results are available for this feature:
BLAST of FC872764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872764 ID=FC872764; Name=FC872764; organism=Citrus clementina; type=EST; length=871bpback to top |