FC872930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872930 vs. ExPASy Swiss-Prot
Match: DSCR3_MOUSE (Down syndrome critical region protein 3 homolog OS=Mus musculus GN=Dscr3 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.779e-49 Identity = 105/266 (39.47%), Postives = 159/266 (59.77%), Query Frame = 2 Query: 83 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFQGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYIT----QDTQRHPLLPE--LKSGKMSTQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPT 862 +T++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+ Y +KPI+I+ + ++ G+I SG TEVPF L G + L YET+ G +NIQY + D+ R L K L+ T EFIV + + ++P V F IT Q+ + LP+ ++ ST C++ P+TGEL VE S I SI++ L+R+E+ E + + IQ Q+ADGD+CRN+++P+Y++ PRL TCPT Sbjct: 3 TTLDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKVL---YETYHGVFVNIQYTLRCDMRRSLLAKDLTKTCEFIVHSAPQ---KGKLTPSPVDFTITPETLQNVKERASLPKFFIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQIADGDICRNLSVPLYMVFPRLFTCPT 262
BLAST of FC872930 vs. ExPASy Swiss-Prot
Match: DSCR3_PONAB (Down syndrome critical region protein 3 homolog OS=Pongo abelii GN=DSCR3 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.100e-48 Identity = 106/266 (39.85%), Postives = 156/266 (58.65%), Query Frame = 2 Query: 83 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFQGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYIT----QDTQRHPLLPE--LKSGKMSTQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPT 862 + ++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+ Y +KPI+I+ + E+ G+ SG TE+PF L G + L YET+ G +NIQY + D+ R L K L+ T EFIV + + SP V F IT Q+ + LLP+ L+ ST C + P+TGEL VE+S I S+++ L+R+E+ E + + IQ Q+ADGDVCR +++PIY++ PRL TCPT Sbjct: 3 TALDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSNIEMVKPGKFPSGKTEIPFEFPLHVKGNKVL---YETYHGVFVNIQYTLRCDMKRSLLAKDLTKTCEFIVHSAPQ---KGKFSPSPVHFTITPETLQNARERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPT 262
BLAST of FC872930 vs. ExPASy Swiss-Prot
Match: DSCR3_HUMAN (Down syndrome critical region protein 3 OS=Homo sapiens GN=DSCR3 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.450e-48 Identity = 105/266 (39.47%), Postives = 156/266 (58.65%), Query Frame = 2 Query: 83 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSGRIGSGTTEVPFSMNLKQHGEENLERFYETFQGADINIQYLVTVDIMRGYLHKSLSATVEFIVETDKADLLERPVSPEMVVFYIT----QDTQRHPLLPE--LKSGKMSTQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPT 862 + ++IK+ R+N++Y E L G +VI S S+ H G+ LT+ G+ NLQ+ S GV E+ Y +KPI+I+ + E+ G+ SG TE+PF L G + L YET+ G +NIQY + D+ R L K L+ T EFIV + + +P V F IT Q+ + LLP+ L+ ST C + P+TGEL VE+S I S+++ L+R+E+ E + + IQ Q+ADGDVCR +++PIY++ PRL TCPT Sbjct: 3 TALDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKVL---YETYHGVFVNIQYTLRCDMKRSLLAKDLTKTCEFIVHSAPQ---KGKFTPSPVDFTITPETLQNVKERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPT 262
BLAST of FC872930 vs. ExPASy Swiss-Prot
Match: DSCR3_DICDI (Down syndrome critical region protein 3 homolog OS=Dictyostelium discoideum GN=DDB_G0292212 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.001e-38 Identity = 84/270 (31.11%), Postives = 148/270 (54.81%), Query Frame = 2 Query: 83 STVEIKLSRSNRIYRPSEPLQGKIVIKSSSSIFHYGIHLTVNGSANLQVRGGSAGVVESLYGVIKPIKILKKSQEIRTSG-RIGSGTTEVPFSMNLKQHGEENLERFYETFQGADINIQYLVTVDIMRGYLHKSLSATVEFIVE--TDKADLLERPVSPEMVVFYITQDTQRH---------PLLPELKSGKMSTQCSLLDPITGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTC 856 + +++KL + ++IYRP + G +VI S + H G+ + V G+ LQ+ S G+ E+ Y +KPI ++ + + G + +G TE+PF L+ + L Y+T+ G +NIQY + D+ RG L K LS T+EFIVE + ++L + ++ F IT D+ + P ++ G +S C++ + G + +E++ I S+++ L+R+E+ + E + IQ Q+ADGD+ RN +P+Y++ PRL TC Sbjct: 3 NVLDLKLKKIDKIYRPGSKVSGNVVINSKDDMSHSGVTIVVEGTVQLQLSSKSVGLFEAFYNSLKPITLMHYTISVTNGGGKFQAGITELPFEFTLEPLPNQQL---YDTYHGVFVNIQYSIKCDVKRGILSKDLSKTIEFIVEVPSQNKEVLMKSTPESLITFNITPDSLVNFKKISKADVPTF-KISGGLVSAICNINEAFQGHMIIESADTVIKSVELQLVRVETCGCADGYAREVTEIQNIQIADGDIWRNFKIPLYMVFPRLFTC 268 The following BLAST results are available for this feature:
BLAST of FC872930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872930 ID=FC872930; Name=FC872930; organism=Citrus clementina; type=EST; length=864bpback to top |