FC872994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 259.61 bits (662), Expect = 1.261e-68 Identity = 114/240 (47.50%), Postives = 163/240 (67.92%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 L +++P+ + GL++W AI TWV +YC+ +Y +D +V++D EIQ+WW E+R GHGDKR+ SWW M +RD+LI+ TI+IW +SALHA+VNFGQY YAG+ PNRPT+ R+F+P+ GT E AEL D+D +LK + + L +++E+LS H++DE+YLGQR S WT D I+ RN + R KNR GP I Y L++P+T++ +G +TGKGIPNS+SI Sbjct: 647 LIEDYPFAVDGLEIWSAIKTWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESWWPSMQTRDDLIETCTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRFMPEPGTDEYAELEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRFGKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGGITGKGIPNSVSI 886
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.377e-67 Identity = 118/240 (49.17%), Postives = 158/240 (65.83%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 L ++PY + GL++W AI +WV DYCS +Y ++ + D E+QAWWKE+REVGHGDK+N WW EM + LI + T +IW +SALHA+VNFGQY YAGY PNRPT+ RKF+P+ GT E EL + DK +LK + + L +L+E+LSRHT+DE+YLGQR+S EWT D+ ++I++RN N L NR GP Y L+ P ++G LTGKGIPNS+SI Sbjct: 626 LIDDYPYAVDGLEIWSAIKSWVTDYCSFYYGSNEEILKDNELQAWWKEVREVGHGDKKNEPWWAEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRKFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFP-----TSEGGLTGKGIPNSVSI 860
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.055e-67 Identity = 118/240 (49.17%), Postives = 159/240 (66.25%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 L +++PY + GL++W AI +WV DYCS +Y D+ + D E+QAWWKE+REVGHGDK+N WW EM + LI + T +IW +SALHA+VNFGQY YAGY PNRPT+ R+F+P+ GT E EL + DK +LK + + L +LVE+LSRHT+DE+YLGQR+S EWT D+ ++I++RN + L NR GP Y L+ P ++G LTGKGIPNS+SI Sbjct: 627 LIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEILKDNELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELKRNPDKAFLKTITAQLQTLLGVSLVEILSRHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFP-----TSEGGLTGKGIPNSVSI 861
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.914e-63 Identity = 106/238 (44.54%), Postives = 160/238 (67.23%), Query Frame = 3 Query: 9 QNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 +++PY + GL++W I TWV+DY S++Y D+ ++ D E+QAWWKE+ EVGHGDK+N WW +M +R++LI+ +I+IWT+SALHA+VNFGQY+Y G NRPTL R+F+P++G+ E EL+ K YLK + +F + +++E+LSRH SDE+YLG+R + WT D+ +K+ +RN + +L+NR GP ++ Y L++P + LT +GIPNSISI Sbjct: 629 EDYPYAVDGLEIWAIIKTWVQDYVSLYYTSDEKLRQDSELQAWWKELVEVGHGDKKNEPWWPKMQTREDLIEVCSIVIWTASALHAAVNFGQYSYGGLILNRPTLSRRFMPEKGSAEFEELVKSPQKAYLKTITPKFQTLIDLSVIEILSRHASDELYLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKE-----GLTFRGIPNSISI 861
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 1.034e-62 Identity = 110/241 (45.64%), Postives = 158/241 (65.56%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGR-LTGKGIPNSISI 722 L +++PY GL +W AI WV +YC+I+Y +D ++ D E+QAWWKE+REVGHGD ++A WW +M S L +A T +IW +SALHA+VNFGQY YAGY PNRPT+ R+ +P+ G+ E EL + +K++++ + +F L +L+E+LS+H++DE+YLGQR + EWT D K++ N++ LKNR GPA Y LM P+TS+ K +T +GIPNSISI Sbjct: 623 LIKDYPYATDGLAIWQAIEQWVTEYCAIYYPNDGVLQGDVELQAWWKEVREVGHGDLKDADWWPKMQSLPELTKACTTIIWIASALHAAVNFGQYPYAGYLPNRPTISRRPMPEPGSKEYTELDENPEKFFIRTITSQFQTILGVSLIEILSKHSADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.303e-62 Identity = 110/238 (46.22%), Postives = 159/238 (66.81%), Query Frame = 3 Query: 9 QNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 +++PY + GL+VW AI +WV+DY +FYK ++ +++D E+QAWWKE+RE GHGDK++ WW +M +R+ L+++ TI+IW +SALHA+VNFGQY AGY PNRPT+ R+++P E T E EL + DK +LK + + L +L+E+LS H+SDEVYLGQR S EW ++ + I ERN + LKNR G K+ Y L+ P ++G +TG+GIPNS+SI Sbjct: 627 KDYPYAVDGLEVWYAIESWVRDYIFLFYKIEEDIQTDTELQAWWKEVREEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGYLPNRPTISRQYMPKENTPEFEELEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFP-----SSEGGVTGRGIPNSVSI 859
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.675e-61 Identity = 114/245 (46.53%), Postives = 163/245 (66.53%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELL---IDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNV-KNDGR-LTGKGIPNSISI 722 L +++PY + GL +W AI WV +Y +I+Y +D ++ DEE+QAWWKE+REVGHGD ++ WW +M++ L +A TI+IW +SALHA+VNFGQY YAG+ PNRPT+ R+ +P+ GT E A+L ++D ++ + +F L +L+E+LS+H+SDEVYLGQR + EWT D +I + N N+ LKNR GP K+ Y L++P+TS+V K G+ LT GIPNSISI Sbjct: 633 LIKDYPYAVDGLVIWWAIERWVGEYLAIYYPNDGVLRGDEELQAWWKEVREVGHGDLKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRPMPEPGTEEYAKLERGGDEADLVFIHTITSQFQTILGISLIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.264e-60 Identity = 108/240 (45.00%), Postives = 156/240 (65.00%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 + +++PY + GL++W AI TWV +Y ++YK DD+++ D E+QA WKE+ EVGHGDK+N WW +M +R+ L++A I+IWT+SALHA+VNFGQY Y G NRPTL R+F+P++G+ E EL + K YLK + +F + +++E+LSRH SDEVYLG+R + WT D K+ ERN + +L+NR GP ++ Y L+ P + LT +GIPNSISI Sbjct: 623 VIEDYPYAVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKE-----GLTFRGIPNSISI 857
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.155e-60 Identity = 105/240 (43.75%), Postives = 153/240 (63.75%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGRLTGKGIPNSISI 722 L +++PY + GL++W AI TWV+DY S++Y D+ +K+D E+Q WWKE+ E GHGD ++ WW ++ + D L++ TI+IWT+SALHA+VNFGQY Y G NRPTL R+ +P+EGT E E++ S K YL+ + +F + +++E+LSRH SDEVYLGQR++ WT D K+ +N + L +R GP ++ Y L+HP + LT +GIPNSISI Sbjct: 630 LIEDYPYAVDGLEIWTAIKTWVQDYVSLYYATDNDIKNDSELQHWWKEVVEKGHGDLKDKPWWPKLQTFDELVEVCTIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRLLPEEGTAEYDEMVKSSQKAYLRTITPKFQTLIDLSVIEILSRHASDEVYLGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKE-----GLTFRGIPNSISI 864
BLAST of FC872994 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.271e-60 Identity = 110/241 (45.64%), Postives = 154/241 (63.90%), Query Frame = 3 Query: 3 LFQNFPYGLHGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAGYPPNRPTLCRKFIPDEGTHELAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQXXXXXXXXXXXXXXXXXQKIVERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGR-LTGKGIPNSISI 722 L +++PY GL++W AI WV +Y +I+Y DD ++ D E+QAWW E+REVGHGD + A+WW M++ L A T +IW +SALHA+VNFGQY YAGY PNRPT+ R+ +P+ GT EL D ++ +++ + + + +L+EVLS+H+SDEVYLGQR + WT D K+V N +A LKNR GPA+ Y L++P+TS+V +T KGIPNSISI Sbjct: 626 LIKDYPYAADGLEIWHAIEQWVGEYLAIYYTDDGVLRGDAELQAWWAEVREVGHGDLKGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRRMPEPGTEAYGELGRDPERAFIRTITSQLQTIIGISLIEVLSKHSSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866 The following BLAST results are available for this feature:
BLAST of FC872994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872994 ID=FC872994; Name=FC872994; organism=Citrus clementina; type=EST; length=738bpback to top |