FC872997

Overview
NameFC872997
Unique NameFC872997
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1164 contig Ccv1_Contig1164:1..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.599e-110
Identity = 193/261 (73.95%), Postives = 231/261 (88.51%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVM-SNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGD-YPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIKTPLPQRM 782
            LAVKKLV S I+Q  EDF+REVR+L KA+HPNL+S++GY+WTP L LLVS+Y PNG+LQ+KLHER PSTPPLSW  R+K+ILGTAKGLA+LHH+FRP  IH+NLKP+NILLD+  NP+ISDFGL+RLLT  D + M +NRFQ+ALGYVAPEL CQ+LRVNEKCD+YGFGVLILELVTGRRPVEYGED+ VILS+HVRV+LE+GNVL+C+DP M + Y EDEVLPVLKLALVCT  IPS+RP+MAE+VQILQVI +P+P R+
Sbjct:  752 LAVKKLVPSPILQNLEDFDREVRILAKAKHPNLVSIKGYFWTPDLHLLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVEYGEDSFVILSDHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQILQVINSPVPHRI 1012          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.490e-65
Identity = 124/260 (47.69%), Postives = 183/260 (70.38%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERL-PSTPP------LSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEY-GEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 761
            +AVKKL T   I+  E+FE+E+  LG  +HPNL S +GYY++  ++L++S++ PNGSL   LH R+ P T        L+W  RF++ LGTAK L+ LH+  +P I+H N+K +NILLD+ Y  ++SD+GL + L  +D   ++ +F +A+GY+APEL  QSLR +EKCD+Y +GV++LELVTGR+PVE   E+ V+IL ++VR LLE G+  DC D  + ++ E+E++ V+KL L+CT   P  RPSMAEVVQ+L+ I+
Sbjct:  618 IAVKKLETLGRIRNQEEFEQEIGRLGGLQHPNLSSFQGYYFSSTMQLILSEFVPNGSLYDNLHLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQVLILRDYVRDLLETGSASDCFDRRLREFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLESIR 877          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.436e-44
Identity = 100/254 (39.37%), Postives = 152/254 (59.84%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEY----GEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLP-VLKLALVCTCHIPSSRPSMAEVVQILQ 752
            +AVK L+ +   Q  ++F+ EV V+G+ RH NL+ L GY      ++LV D+  NG+L+  +H  +    PL+W  R  +ILG AKGLA+LH    P ++H ++K SNILLD  +N ++SDFGLA+LL     +V + R     GYVAPE  C  + +NEK DIY FG+LI+E++TGR PV+Y    GE N+V   + ++ ++      + VDP + + P  + L  VL +AL C     + RP M  ++ +L+
Sbjct:  179 VAVKNLLNNRG-QAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYV-TTRVMGTFGYVAPEYACTGM-LNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLV---DWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.794e-44
Identity = 103/239 (43.10%), Postives = 146/239 (61.09%), Query Frame = 3
Query:   51 EDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMS-NRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPV--EYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVI 758
            E FE EV  LGK RH N++ L     T   KLLV +Y PNGSL   LH        L W  RFK+IL  A+GL++LHH   PPI+H ++K +NIL+D +Y  R++DFG+A+ +    K   S +    + GY+APE    +LRVNEK DIY FGV+ILE+VT +RPV  E GE ++V   + V   L++  +   +DP +    ++E+  +L + L+CT  +P +RPSM  VV++LQ I
Sbjct:  730 EAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGM--LGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEY-AYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELGEKDLV---KWVCSTLDQKGIEHVIDPKLDSCFKEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEI 962          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.567e-44
Identity = 99/254 (38.98%), Postives = 157/254 (61.81%), Query Frame = 3
Query:    3 MLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVE---YGEDNVVILSEHVRVLLEEGNVLDCVDPSM-GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 752
            ++AVK+L           F+ EV ++  A H NL+ L G+  TP  +LLV  Y  NGS+ + L ER PS PPL W  R ++ LG+A+GL++LH    P IIH ++K +NILLD+ +   + DFGLA+L+   D HV +   +  +G++APE      + +EK D++G+G+++LEL+TG+R  +      D+ V+L + V+ LL+E  +   VDP +  +Y E E+  V+++AL+CT   P  RP M+EVV++L+
Sbjct:  326 LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLE 577          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.882e-44
Identity = 101/242 (41.74%), Postives = 144/242 (59.50%), Query Frame = 3
Query:   57 FEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVE--YGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ-VIKTPLP 773
            FERE+ +LG  +H  L++L GY  +P  KLL+ DY P GSL   LHER      L W +R  +I+G AKGL++LHH   P IIH ++K SNILLD N   R+SDFGLA+LL   + H+ +       GY+APE   QS R  EK D+Y FGVL+LE+++G+RP +  + E  + ++   ++ L+ E    D VDP+      + +  +L +A  C    P  RP+M  VVQ+L+  + TP P
Sbjct:  347 FERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHER---GEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHI-TTIVAGTFGYLAPEY-MQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVG-WLKFLISEKRPRDIVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLLESEVMTPCP 582          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.291e-43
Identity = 99/254 (38.98%), Postives = 157/254 (61.81%), Query Frame = 3
Query:    3 MLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVE---YGEDNVVILSEHVRVLLEEGNVLDCVDPSM-GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 752
            ++AVK+L           F+ EV ++  A H NL+ L G+  TP  +LLV  Y  NGS+ + L ER  S PPL W  R ++ LG+A+GLA+LH    P IIH ++K +NILLD+ +   + DFGLA+L+   D HV +   +  +G++APE      + +EK D++G+GV++LEL+TG+R  +      D+ V+L + V+ LL+E  +   VD  + G+Y ++EV  ++++AL+CT   P  RP M+EVV++L+
Sbjct:  313 LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.686e-43
Identity = 94/237 (39.66%), Postives = 143/237 (60.34%), Query Frame = 3
Query:   51 EDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVEYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVIK 761
            + F  EV+ LG  RH N++   G  W    +LL+ DY PNGSL + LHER  S+  L W  R++++LG A+GLA+LHH   PPI+H ++K +NIL+  ++ P I+DFGLA+L+   D    SN    + GY+APE    S+++ EK D+Y +GV++LE++TG++P++      + L + VR       VLD    S  +   DE++ VL  AL+C    P  RP+M +V  +L+ IK
Sbjct:  834 DSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSS--LDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYG-YSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVRQNRGSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLKEIK 1067          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.875e-43
Identity = 99/254 (38.98%), Postives = 158/254 (62.20%), Query Frame = 3
Query:    3 MLAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPVE---YGEDNVVILSEHVRVLLEEGNVLDCVDPSM-GDYPEDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQ 752
            ++AVK+L           F+ EV ++  A H NL+ L G+  TP  +LLV  Y  NGS+ + L ER PS  PL+W+ R ++ LG+A+GL++LH    P IIH ++K +NILLD+ +   + DFGLARL+   D HV +   +  +G++APE      + +EK D++G+G+++LEL+TG+R  +      D+ V+L + V+ LL+E  +   VDP +  +Y E EV  ++++AL+CT   P  RP M+EVV++L+
Sbjct:  329 LVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHV-TTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 580          
BLAST of FC872997 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.875e-43
Identity = 101/254 (39.76%), Postives = 149/254 (58.66%), Query Frame = 3
Query:    6 LAVKKLVTSDIIQYPEDFEREVRVLGKARHPNLISLEGYYWTPQLKLLVSDYAPNGSLQAKLHERLPSTPPLSWTNRFKVILGTAKGLAHLHHSFRPPIIHYNLKPSNILLDDNYNPRISDFGLARLLTRLDKHVMSNRFQSALGYVAPELTCQSLRVNEKCDIYGFGVLILELVTGRRPV--EYGEDNVVILSEHVRVLLEEGNVLDCVDPSMGDYP-EDEVLPVLKLALVCTCHIPSSRPSMAEVVQILQVI 758
            +AVKKL  +   Q   +F  E+  LGK +HPNL+SL GY    + KLLV +Y  NGSL   L  +      L W+ R K+ +G A+GLA LHH F P IIH ++K SNILLD ++ P+++DFGLARL++  + HV S       GY+ PE   QS R   K D+Y FGV++LELVTG+ P   ++ E     L       + +G  +D +DP +     ++  L +L++A++C    P+ RP+M +V++ L+ I
Sbjct:  942 VAVKKLSEAKT-QGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHV-STVIAGTFGYIPPEYG-QSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192          
The following BLAST results are available for this feature:
BLAST of FC872997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y3804_ARATH1.599e-11073.95Probably inactive leucine-rich repeat receptor-lik... [more]
Y1124_ARATH3.490e-6547.69Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH4.436e-4439.37Probable serine/threonine-protein kinase At1g01540... [more]
HSL1_ARATH5.794e-4443.10Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
SERK1_ARATH7.567e-4438.98Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
FEI1_ARATH9.882e-4441.74LRR receptor-like serine/threonine-protein kinase ... [more]
BAK1_ARATH1.291e-4338.98BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
RCH2_ARATH1.686e-4339.66Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
SERK2_ARATH2.875e-4338.98Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
EXS_ARATH2.875e-4339.76Leucine-rich repeat receptor protein kinase EXS OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BD01FM1 AbsDev Citrus clementina cDNA clone KN0AAI2BD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872997 ID=FC872997; Name=FC872997; organism=Citrus clementina; type=EST; length=821bp
GAATGTTAGCAGTCAAAAAACTTGTTACATCCGATATAATCCAATATCCA
GAAGACTTTGAAAGGGAAGTTCGAGTCTTGGGAAAAGCAAGGCACCCAAA
TTTGATATCACTGGAAGGATACTACTGGACTCCTCAGTTGAAGCTTTTGG
TGTCTGATTATGCACCAAACGGTAGCTTGCAAGCCAAACTCCATGAAAGG
CTTCCTTCTACTCCACCGCTTTCTTGGACTAACAGATTCAAAGTAATCCT
CGGAACAGCAAAAGGCCTTGCTCATTTGCACCATTCTTTCCGCCCACCCA
TTATTCATTACAACCTAAAACCAAGCAACATCTTGCTTGATGACAATTAC
AACCCAAGGATTTCAGACTTTGGATTGGCGAGGCTTTTGACCAGGCTCGA
CAAACACGTAATGAGCAACAGATTTCAGAGCGCACTAGGGTATGTGGCAC
CAGAATTAACATGCCAGAGCTTAAGAGTGAATGAGAAATGTGACATATAT
GGTTTTGGGGTTTTAATACTTGAGCTTGTAACTGGTAGAAGGCCTGTTGA
ATATGGTGAAGACAATGTAGTGATATTAAGCGAGCATGTGAGAGTTCTTC
TGGAAGAGGGCAACGTGTTAGATTGTGTTGATCCAAGCATGGGAGATTAC
CCAGAAGATGAGGTCTTACCGGTACTCAAATTGGCCCTTGTCTGCACTTG
TCATATACCATCAAGCAGGCCTTCAATGGCAGAGGTTGTCCAAATATTGC
AAGTCATCAAAACCCCACTTCCACAGAGAATGGAGGTATTCTAAAACACC
AATGGTGCTGCCCTGATCATT
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