FC873084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873084 vs. ExPASy Swiss-Prot
Match: APC10_ARATH (Anaphase-promoting complex subunit 10 OS=Arabidopsis thaliana GN=At2g18290 PE=2 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 1.266e-76 Identity = 134/170 (78.82%), Postives = 147/170 (86.47%), Query Frame = 1 Query: 1 IDDDLKEMEKNPA*SVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFITYSTVR 510 IDDDL+EM KN A SVSSCKPGNGV+ LRDDNL+TYWQSDG QPHL+NI YVDFKLDESYTPSKIS+RAGDGFHNLKEIK+VELVKPTGWV +SLSG DPR+TFVNTFMLQI +LSNHLNGRDTH+RQIK+YGPRPNPIPHQ FQFTS EF+TYST+R Sbjct: 23 IDDDLREMGKNAAWSVSSCKPGNGVTTLRDDNLETYWQSDGLQPHLINIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKSVELVKPTGWVCLSLSGTDPRETFVNTFMLQIAILSNHLNGRDTHIRQIKVYGPRPNPIPHQPFQFTSMEFLTYSTLR 192
BLAST of FC873084 vs. ExPASy Swiss-Prot
Match: APC10_MOUSE (Anaphase-promoting complex subunit 10 OS=Mus musculus GN=Anapc10 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.854e-44 Identity = 87/166 (52.41%), Postives = 115/166 (69.28%), Query Frame = 1 Query: 13 LKEMEKNPA*SVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFITYSTVR 510 ++E+ S+SSCKPG GV LRDDNL+TYWQSDG+QPHLVNI Y D+K DESYTPSKISVR G+ FHNL+EI+ +ELV+P+GW+++ L+ N + T TFM+QI VL+NH NGRDTH+RQIKIY P + + T+ +F+ Y ++R Sbjct: 22 VREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPT--RTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185
BLAST of FC873084 vs. ExPASy Swiss-Prot
Match: APC10_HUMAN (Anaphase-promoting complex subunit 10 OS=Homo sapiens GN=ANAPC10 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.854e-44 Identity = 87/166 (52.41%), Postives = 115/166 (69.28%), Query Frame = 1 Query: 13 LKEMEKNPA*SVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFITYSTVR 510 ++E+ S+SSCKPG GV LRDDNL+TYWQSDG+QPHLVNI Y D+K DESYTPSKISVR G+ FHNL+EI+ +ELV+P+GW+++ L+ N + T TFM+QI VL+NH NGRDTH+RQIKIY P + + T+ +F+ Y ++R Sbjct: 22 VREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPT--RTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185
BLAST of FC873084 vs. ExPASy Swiss-Prot
Match: APC10_BOVIN (Anaphase-promoting complex subunit 10 OS=Bos taurus GN=ANAPC10 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 8.279e-44 Identity = 86/166 (51.81%), Postives = 115/166 (69.28%), Query Frame = 1 Query: 13 LKEMEKNPA*SVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFITYSTVR 510 ++E+ S+SSCKPG GV LRDDNL+TYWQSDG+QPHLVN+ Y D+K DESYTPSKISVR G+ FHNL+EI+ +ELV+P+GW+++ L+ N + T TFM+QI VL+NH NGRDTH+RQIKIY P + + T+ +F+ Y ++R Sbjct: 22 VREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNLQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPT--RTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185
BLAST of FC873084 vs. ExPASy Swiss-Prot
Match: APC10_DROME (Anaphase-promoting complex subunit 10 OS=Drosophila melanogaster GN=CG11419 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 6.789e-38 Identity = 79/168 (47.02%), Postives = 112/168 (66.67%), Query Frame = 1 Query: 13 LKEMEKNPA*SVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGP-RPNPIPHQQF-QFTSSEFITYSTVR 510 ++E+ S+SSCKPG GV LRD+ +DTYWQSDG PHLVNI Y D+KLDESYTPS+IS+R+G F++L+E++ ++L +PTGWV I + + + + TFMLQI V+SNH NGRDTH+RQI+I+ P P + F +F + +F ++T+R Sbjct: 30 VREVGAQAVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVNIQFHKRTNISQIYIYTDYKLDESYTPSRISIRSGTNFNDLQELQVMDLTEPTGWVQIPIKDGNVKS--IRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEGKHYPLELFGKFGTVDFQKFATIR 195
BLAST of FC873084 vs. ExPASy Swiss-Prot
Match: APC10_DICDI (Anaphase-promoting complex subunit 10 OS=Dictyostelium discoideum GN=anapc10 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.014e-33 Identity = 76/165 (46.06%), Postives = 106/165 (64.24%), Query Frame = 1 Query: 19 EMEKNPA*SVSSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQF-QFTSSEFITYSTVR 510 E+ K+ + SVSS KPG+GV LRD+NLDT+WQSD QPH + I + D+KLDESYTP KIS++AG H+L+EI EL +P+GW+ I LS N + + +LQI +LSN NGRD+H+RQIK+YG + + + Q+ +F S E + T+R Sbjct: 27 EIGKHASWSVSSAKPGSGVEQLRDNNLDTFWQSDAQQPHHITIQFPKKCYIENLLIHCDYKLDESYTPCKISIKAGTILHDLQEIILTELEEPSGWINIPLSFN---NNSLKANLLQISILSNLKNGRDSHIRQIKVYGKKISIENYTQYPKFNSPEVSMFQTLR 188
BLAST of FC873084 vs. ExPASy Swiss-Prot
Match: APC10_SCHPO (Anaphase-promoting complex subunit 10 OS=Schizosaccharomyces pombe GN=apc10 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.887e-30 Identity = 64/156 (41.03%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 49 SSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGP--RPNPIPHQQFQFTSSEFITYSTVR 510 SS K G + +RDDN+DTYWQSDG+QPH ++I Y+ + LDESYTPS + + AG GF +L+ + TV++ +PTGWV++ + G+ R+ ++ ++QI +L+NH +G+D+HVR IKIY P I + +TS +FI+ + +R Sbjct: 35 SSEKSGFPIRLVRDDNIDTYWQSDGSQPHTIHIKFVKRVSIKYVSMYLQYTLDESYTPSTLRISAGTGFQDLEIVTTVQVEEPTGWVHVPV-GDFGRNGLLDVHLIQIKILANHQSGKDSHVRLIKIYAPEIEQPAIAVDEIPYTSLQFISRNQLR 189
BLAST of FC873084 vs. ExPASy Swiss-Prot
Match: APC10_YEAST (Anaphase-promoting complex subunit DOC1 OS=Saccharomyces cerevisiae GN=DOC1 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18 Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 1 Query: 49 SSCKPGNGVSALRDDNLDTYWQSDGAQPHLVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGDGFHNLKEIKTVELVKPTGWVYISLSGNDPRDTFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNP 450 SS K GN V DDN DT+WQSDG QPH ++I + DESY PS + V AG + + K +E+ GWV + N D + ++++ NH NG+DTH+R I++Y P P Sbjct: 93 SSFKLGNPVDFALDDNYDTFWQSDGGQPHQLDIMFSKRMDICVMAIFFSMIADESYAPSLVKVYAGHSPSDARFYKMLEVRNVNGWVALRFLDNREDDQLLKCQFIRLLFPVNHENGKDTHLRGIRLYVPSNEP 226 The following BLAST results are available for this feature:
BLAST of FC873084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873084 ID=FC873084; Name=FC873084; organism=Citrus clementina; type=EST; length=560bpback to top |