FC873181
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2) HSP 1 Score: 338.576 bits (867), Expect = 1.148e-92 Identity = 167/178 (93.82%), Postives = 174/178 (97.75%), Query Frame = 2 Query: 2 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 DLKKE+YLRKSYCTFLQDLGMRLKVPQVTIATAI+FCHRFF+RQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVI++SYEIIHKKD+ A QRI+ QKEVYEQQKELILLGERVVL TLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL Sbjct: 56 DLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIK-QKEVYEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 232
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 2.829e-91 Identity = 165/178 (92.70%), Postives = 173/178 (97.19%), Query Frame = 2 Query: 2 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 DLKKE+YLRKSYCTFLQDLGMRLKVPQVTIATAI+FCHRF++RQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVI+VSYEIIHKKD A QRI+ QKEVY+QQKELILL ERVVLATLGFDLNVHHPYKPLVEAI+KFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL Sbjct: 55 DLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAGQRIK-QKEVYDQQKELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 231
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.075e-90 Identity = 164/178 (92.13%), Postives = 172/178 (96.63%), Query Frame = 2 Query: 2 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHA+NDRRTIATVCMFLAGKVEETPRPLKDVI+VSYEIIHKKD T Q+I+ QKEVYEQQKELIL GE++VL+TLGFD NV+HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL Sbjct: 52 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKDPTTAQKIK-QKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 228
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2) HSP 1 Score: 328.176 bits (840), Expect = 1.552e-89 Identity = 164/178 (92.13%), Postives = 171/178 (96.07%), Query Frame = 2 Query: 2 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF RQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVI VSYEII+KKD A Q+I+ QKEVYEQQKELIL GE++VL+TLGFDLNV+HPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL Sbjct: 52 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKDPGASQKIK-QKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 228
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT12_ARATH (Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 3.043e-69 Identity = 134/180 (74.44%), Postives = 149/180 (82.78%), Query Frame = 2 Query: 2 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKV--AQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 DLK ET LR SYCTFL+ LG RLKVPQVTIATAI FCHRFF+RQSHAKNDR+TIATVCM LAGKVEETP L+DVII SYE IHKKD QR KEVY+QQKEL+L+GE +VL+TL FDL + HPYKPLVEAIKK+ V A+ LAQ AWNFVND LRT+LCLQ++PHHIAAGAI L Sbjct: 50 DLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLAGAQR----KEVYDQQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVEDAKTQLAQFAWNFVNDCLRTTLCLQYQPHHIAAGAILL 225
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT11_ORYSJ (Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 8.596e-56 Identity = 101/175 (57.71%), Postives = 142/175 (81.14%), Query Frame = 2 Query: 11 KETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 KE LR +YC+F++D+G+RL++PQVTIATA + CHRF++RQSHAKN+ +T+ATVC+FLA K+E+TP PL+ VIIV+YE +++KD A RI QKEV E+QKELIL+GE ++L+T+ FD N+ HPY+PL A+KK + Q + QVA N +ND +RT+L +QFKPH+IAAG+++L Sbjct: 31 KEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFYLRQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVIIVAYETMYRKDCNAAHRI-YQKEVLEKQKELILVGETLLLSTIRFDFNIQHPYEPLKLALKKLGIFQMEVKQVAVNLINDAIRTTLVVQFKPHYIAAGSLYL 204
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT12_ORYSJ (Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 4.266e-55 Identity = 99/174 (56.90%), Postives = 142/174 (81.61%), Query Frame = 2 Query: 14 ETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 E+ +R+ YC+F++D+G+RLK+PQ+TIATAI+FCHRF++ QS AKN +TIATVC+FLA KVE+TP PL VI V+Y ++++D +RI QK+V+E+QK LIL GER+VL T+ FD N+ HPY+PL++A++K ++Q + QVAWNFVND L+T+LCLQ+KP +IAAG+++L Sbjct: 41 ESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDPATARRI-HQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYL 213
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT13_ARATH (Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 9.526e-47 Identity = 96/178 (53.93%), Postives = 126/178 (70.79%), Query Frame = 2 Query: 2 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 DL KE++LR SYCTFLQ LGM+L V QVTI+ A++ CHRF++RQSHAKND +TIAT +FLA K E+ P L V++ SYEII++ D +A RI Q E Y + KE+IL GE ++L+T F L++ PYKPL A+ + A LA AWNFV+D +RT+LCLQ+KPH IA + L Sbjct: 53 DLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRI-HQTECYHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLN-AWPDLATAAWNFVHDWIRTTLCLQYKPHVIATATVHL 228
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CCT11_ARATH (Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.594e-44 Identity = 90/180 (50.00%), Postives = 125/180 (69.44%), Query Frame = 2 Query: 2 DLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNA--LAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 535 +LK+ET+ R SY +FLQ+LG RL PQ TIATAI+ C RFF RQS KND +T+A +CMF+AGKVE +PRP DV+ VSY ++ K+ ++V+E+ K +L GE++VL+TL DL + HPYK +++ +K+ ++ L Q A+NFVND LRTSLCLQF P IA+ AI++ Sbjct: 26 NLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPL--------RDVFERLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDGRRLCQAAFNFVNDSLRTSLCLQFGPSQIASAAIYI 197
BLAST of FC873181 vs. ExPASy Swiss-Prot
Match: CG1C_SCHPO (Cyclin pch1 OS=Schizosaccharomyces pombe GN=pch1 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 9.904e-28 Identity = 64/174 (36.78%), Postives = 100/174 (57.47%), Query Frame = 2 Query: 5 LKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIIVSYEIIHKKDSTAPQRIRQQKEVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGA 526 L +E R C F+ ++G+RLK+PQ +ATA I+ HRF++R S +A C+FLA KVE++ R L+D++I ++ K + + +Q + Y + +++IL E V+L L FD V HPY ++ IKKF + +VAW ++ND R+ CL + P IAA A Sbjct: 37 LDQEEIQRSKGCNFIINVGLRLKLPQTALATANIYFHRFYLRFSLKNYHYYEVAATCIFLATKVEDSVRKLRDIVINCAKVAQKNSNVL---VDEQTKEYWRWRDVILYTEEVLLEALCFDFTVEHPYPYVLSFIKKFVADDKNVTKVAWTYINDSTRSIACLLYSPKTIAAAA 207 The following BLAST results are available for this feature:
BLAST of FC873181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873181 ID=FC873181; Name=FC873181; organism=Citrus clementina; type=EST; length=537bpback to top |