FC873186

Overview
NameFC873186
Unique NameFC873186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.016e-83
Identity = 140/240 (58.33%), Postives = 188/240 (78.33%), Query Frame = 3
Query:    6 AMKTGEAAKDDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSASYVHAPHAFIFLQPQHGAHLILRKL 725
            A+K GE  +DDLLG+L+ESN++EI++ GN K  G+S +DVI+ECKLFYFAGQETT VLL WT +LLSKH +WQ  AREEVLQ FG  KP+F+ LN LK V MI YEVLRLYPP+  L++ V K+TK+G   +PA + + L T+++H +K +WG+DA EF P RF +G++ ATKN V+Y PF+WGPR+C+GQNFAL++AK+ +AMILQ F F+++ SYVHAP   + +QPQ G+H+I +KL
Sbjct:  283 ALKAGEPGEDDLLGVLLESNIQEIQKQGNKKDGGMSINDVIEECKLFYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKL 522          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.303e-30
Identity = 78/213 (36.62%), Postives = 123/213 (57.75%), Query Frame = 3
Query:    9 MKTGEAAKDDLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKK-PDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 641
            +K  +  + D L L++ S N KE+  H     K +S  +++ +  +F FAG ETTS  L + M  L+ H D Q   +EE+   F +K  P +D L +++ + M+  E LRLYP    L R  +K+ +I  + +P  +V+ + T  +H D+ LW  + +EF+PERFS   +K + N  +Y PF  GPR CIG  FA++  K+A+  +LQNFSF+
Sbjct:  261 LKDKQKHRVDFLQLMINSQNSKEMDTH-----KALSDLELVAQSIIFIFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLW-PEPEEFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFK 466          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 78/204 (38.24%), Postives = 118/204 (57.84%), Query Frame = 3
Query:   36 DLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 641
            DLL L++ S N KE+  H     K +S ++++ +  +F FAG ETTS  L      L+ H D Q   +EE+   F +K P  +D L +++ + M+  E LRLYP    L R  +K+ +I  + +P  +V+ +   ++H D  LW  + +EF+PERFS+   K T N  +Y PF  GPR CIG  FAL+  K+A+  +LQNFSF+
Sbjct:  270 DLLQLMINSQNSKEMDPH-----KSLSNEELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.474e-29
Identity = 68/204 (33.33%), Postives = 117/204 (57.35%), Query Frame = 3
Query:   36 DLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP-DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFEL 644
            D L L+++S      + G  + KG++  +++ +  +F FAG ET+S  + +    L+ +       +EE+  VF +K P  ++ L ++  +  +  E LRLYP  P L R  +K  +I  +++P + ++ + T  +H D ++W  D +EFKPERFS+  +K + +  +Y PF  GPR CIG  FAL+  K+AM  ILQ+F+F +
Sbjct:  271 DFLQLMIDSQKGSDTKTGEEQTKGLTDHEILSQAMIFIFAGYETSSSTMSFLAYNLATNHHVMTKLQEEIDTVFPNKAPIQYEALMQMDYLDCVLNESLRLYPIAPRLERVAKKTVEINGIVIPKDCIVLVPTWTLHRDPEIW-SDPEEFKPERFSKE-NKESIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSV 472          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29
Identity = 75/204 (36.76%), Postives = 120/204 (58.82%), Query Frame = 3
Query:   36 DLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 641
            D L L+++S N KE + H     K +S  ++  +  +F FAG ETTS +L +T+  L+ H D Q   ++E+  V  +K P  +D + +++ + M+  E LRL+P    L R  +K+ +I  + +P  S++ + T  +HHD K W  + +EF+PERFS+   K + +   Y PF  GPR CIG  FAL+  K+A+  +LQNFSF+
Sbjct:  270 DFLQLMIDSQNSKETESH-----KALSDLELAAQSIIFIFAGYETTSSVLSFTLYELATHPDVQQKLQKEIDAVLPNKAPPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYW-TEPEEFRPERFSK--KKDSIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 465          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.080e-28
Identity = 73/213 (34.27%), Postives = 122/213 (57.28%), Query Frame = 3
Query:    9 MKTGEAAKDDLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 641
            +K  +  + D L L++ S N KE   H     K +S  +++ +  +F FAG ETTS  L + + +L+ H D Q   +EE+   F +K P  +D L +++ + M+  E LR++P    L R  +K+ +I  + +P  + + +   ++H D +LW  + +EF+PERFS+  +K + N   Y PF  GPR CIG  FA++  K+A+  +LQNFSF+
Sbjct:  261 LKDNQKPRVDFLQLMINSQNSKETDNH-----KALSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLW-PEPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.548e-28
Identity = 71/203 (34.98%), Postives = 118/203 (58.13%), Query Frame = 3
Query:   36 DLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 641
            D + L+ME+  K   +  +   K +S  ++  +  +F FAG ETTS +L +T+  L+ H D Q   +EE+ +   +K P  +D +  ++ + M+  E LRLYP    L R  +K+ +I  + +P  S + + + ++HHD + W  + +EF+PERFS+  +K + +   Y PF  GPR CIG  FAL+  K+A+  +LQNFSF+
Sbjct:  270 DFIYLMMEAYNKSKDKDSH---KALSEIEITAQSIIFIFAGYETTSSILSFTVYSLATHPDIQKKLQEEIDEALPNKAPPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQ 467          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.548e-28
Identity = 70/225 (31.11%), Postives = 123/225 (54.67%), Query Frame = 3
Query:    9 MKTGEAAKDDLLGLLMESNLKEIKEHGNNK----------LKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVL-SRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSA 650
            ++ GE A  D + L +++  ++++  G N            + ++ ++++ +C +F  AG +TT++ L +   LL+ H + Q   +EEV +   + +   D L++LK ++ +F E LRLYP      SR   + TK+G++ +   ++I + T  +H D  +WGDDA++FKPER+    S     +  Y PF  GPR CIG   A +E K+ +  IL+ F+FE  A
Sbjct:  270 IEIGEPA--DFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFETGA 492          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.634e-28
Identity = 74/212 (34.91%), Postives = 118/212 (55.66%), Query Frame = 3
Query:    9 MKTGEAAKDDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP-DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 641
            MK  E  + D L L++ S   + KE      K +S  +++ +  +F FAG ETTS  L + + LL+ H D Q   ++E+     +K P  +D L +++ + M+  E LRLYP    L R  + + +I  L +P  +V+ + T  +H D K W  + +EF+PERFS+  ++ + N   Y PF  GPR CIG  FAL+  K+A+  +LQNF+ +
Sbjct:  261 MKEKEKQRVDFLQLMINSQNYKTKESH----KALSDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYW-PEPEEFRPERFSKK-NQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQ 466          
BLAST of FC873186 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28
Identity = 69/187 (36.90%), Postives = 110/187 (58.82%), Query Frame = 3
Query:  102 KGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVL-SRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSASYV 659
            K ++ D++I +  +F  AG +TT++ L ++  LL+ H + Q   +EEV +   D +  FD L++LK ++ +  E LRLYP   ++ +R   K T +  + + A + I + T  +HHD K+WGDD  EFKPER+  G  +    +  Y PF  GPRICIG   A++E KM +  IL+N++FE +   V
Sbjct:  309 KHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETV 494          
The following BLAST results are available for this feature:
BLAST of FC873186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
C72A1_CATRO1.016e-8358.33Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP3AC_CANFA1.303e-3036.62Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP3AT_PIG3.791e-3038.24Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP3AR_ONCMY5.474e-2933.33Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]
CP3A5_HUMAN7.150e-2936.76Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP3AO_SHEEP2.080e-2834.27Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP3AG_MOUSE3.548e-2834.98Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
C13A1_CAEEL3.548e-2831.11Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
CP3AD_MOUSE4.634e-2834.91Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]
C13A7_CAEEL6.053e-2836.90Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC07FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873186 ID=FC873186; Name=FC873186; organism=Citrus clementina; type=EST; length=847bp
AGATAGCAATGAAAACAGGGGAAGCTGCAAAAGATGACTTATTGGGTTTA
CTTATGGAATCCAATCTCAAAGAAATTAAAGAACATGGAAACAACAAACT
TAAAGGGATCAGCAGAGACGATGTTATCGATGAGTGTAAGCTATTTTACT
TTGCTGGGCAAGAGACTACTTCAGTTTTGCTTCTTTGGACAATGGTTTTG
TTGAGCAAGCATCAAGACTGGCAAGCACATGCAAGAGAAGAGGTTTTGCA
AGTCTTTGGTGATAAGAAACCTGACTTCGATGGATTGAATCGCCTCAAAA
TCGTTCAAATGATCTTCTACGAGGTACTCAGGCTGTACCCACCTTTGCCT
GTACTTTCTCGATACGTTGAAAAGGAAACGAAAATCGGGGACTTGATATT
ACCAGCTGAATCAGTGATCGCATTGCAAACTCTCTTGGTTCACCATGATA
AAAAACTTTGGGGTGACGATGCAAAAGAGTTTAAACCTGAGAGGTTTTCA
GAAGGAATTTCAAAGGCAACAAAAAATCAAGTTTCTTATTTCCCATTTGC
ATGGGGTCCTAGAATATGCATTGGGCAAAACTTTGCCCTGGTTGAAGCAA
AAATGGCCATGGCAATGATTCTGCAGAATTTCTCCTTCGAGTTGTCTGCA
TCCTATGTTCATGCTCCTCATGCGTTTATATTCCTCCAGCCACAACATGG
AGCTCACCTGATTTTACGGAAATTATAGAGCTTTATAAACTCTCAGTTGC
AAAATAAAATTCTTATGATCGGAAAACAATGTATCAGTTATGATAATATA
GTATAAATTTTGATAAATTAATACTTGATAAAAAAAAAAAAAAAAAA
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