FC873194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.546e-63 Identity = 117/142 (82.39%), Postives = 132/142 (92.96%), Query Frame = 2 Query: 2 NSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL--APRAMEKSKIR 421 N+LATT KN+DEVDG+PG GALF+KVSMDGAPYLRKVDLR+YTNYGELSSALEKMF+ FT+GQCGS+ A G++MLSE+KLKDLL+G +YVLTYEDKDGDWMLVGDVPWEMFID CK+LKIMKG DAIGL APRAMEKSK+R Sbjct: 196 NTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMR 337
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60 Identity = 109/135 (80.74%), Postives = 124/135 (91.85%), Query Frame = 2 Query: 11 ATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 415 ++TSKN DEVDGKPG G LF+KVSMDGAPYLRKVDLRTYT+Y +LSSALEKMFSCFT+GQCG H A GRE +SE KLKDLLHGSE+VLTYEDKDGDWMLVGDVPWE+F ++C++LKIMKGSD+IGLAP A+EKSK Sbjct: 182 SSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSK 316
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.167e-49 Identity = 95/137 (69.34%), Postives = 112/137 (81.75%), Query Frame = 2 Query: 20 SKNNDEVDGKPGPG--ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 424 + +E + K GP L++KVSM+GAPYLRK+DL+TY +Y ELSSALEKMFSCFTIGQ GSH GR+ L+ES+L DLL GSEYV+TYEDKD DWMLVGDVPWEMFI SCK+L+IMK S+AIGLAPR MEK + RN Sbjct: 169 NSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.087e-48 Identity = 99/140 (70.71%), Postives = 111/140 (79.29%), Query Frame = 2 Query: 23 KNNDEVDG---KPGPGAL---FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 424 K D DG K G GA F+KVSMDGAPYLRKVDL+ Y +Y ELS ALEKMFS FTIG CGSH G ++ESK+ DLL+GSEYV TYEDKDGDWMLVGDVPWEMF++SCKRL+IMKGS+AIGLAPRAMEK K R+ Sbjct: 141 KGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG---MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.708e-47 Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = 2 Query: 11 ATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 424 A K++ E P G L++KVSMDGAPYLRKVDL+ Y NY ELS ALEKMFSCFT+G S+ GR+ LS+ +L DL +G+E VLTYEDKD DWMLVGDVPW MF DSC+RL+IMKGSDA+GLAPRA +KSK RN Sbjct: 129 ALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.819e-43 Identity = 86/143 (60.14%), Postives = 108/143 (75.52%), Query Frame = 2 Query: 20 SKNNDEVDGKPGPGA--------LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 424 ++ ND+ G G + ++KVSMDGAPYLRK+DL+ Y Y +LS+AL KMFS FTIG G ++ ++ESKL DLL+GS+YV TYEDKDGDWMLVGDVPWEMF+DSCKR++IMKGS+AIGLAPRA+EK K R+ Sbjct: 96 TEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.152e-42 Identity = 88/143 (61.54%), Postives = 105/143 (73.43%), Query Frame = 2 Query: 2 NSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAI--GLAPRAMEKSKIRN 424 N LA +E + P A F+KVSMDGAPYLRKVDL+ Y +Y ELS +L KMFS FT G C S ++ ++ESKL DLL+ S+YV TYEDKDGDWMLVGDVPWEMF++SCKRL+IMKG +AI GLAPRAM K K R+ Sbjct: 103 NMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGM--KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.717e-42 Identity = 91/143 (63.64%), Postives = 109/143 (76.22%), Query Frame = 2 Query: 2 NSLATTS--KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 424 N++AT + ++ + K G G L++KVSMDGAPYLRKVDL+TY NY +LS+ALEKMF FT G+ G LSES+ KD EYVLTYEDKDGDWMLVGDVPWEMF +SC+RL+IMKGSDAIGLAPRA++KSK RN Sbjct: 129 NTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDG---------LSESR-KD----GEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDKSKNRN 257
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.172e-41 Identity = 84/131 (64.12%), Postives = 102/131 (77.86%), Query Frame = 2 Query: 32 DEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 424 +E G F+KVSMDGAPYLRKVDL+ YT+Y +LS AL KMFS FT+G G+ + ++ESK+ DLL+ SEYV +YEDKDGDWMLVGDVPW MF++SCKRL+IMKGS+AIGLAPRAMEK K R+ Sbjct: 100 EEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228
BLAST of FC873194 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.837e-41 Identity = 89/143 (62.24%), Postives = 103/143 (72.03%), Query Frame = 2 Query: 2 NSLATTS--KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 424 N++AT N ++VD K G G L++KVSMDGAPYLRKVDL+TY NY ++S LEKMF F+ G+ G+ KD EYVLTYEDKDGDWMLVGDVPWEMF DSC+RL+IMKGSDAIGLAPRA EKSK RN Sbjct: 136 NTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQ-----------KD----GEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263 The following BLAST results are available for this feature:
BLAST of FC873194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873194 ID=FC873194; Name=FC873194; organism=Citrus clementina; type=EST; length=725bpback to top |