FC873302

Overview
NameFC873302
Unique NameFC873302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length770
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14858 contig Ccv1_Contig14858:75..844. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDKF4_ORYSJ (Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica GN=CDKF-4 PE=2 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 4.345e-107
Identity = 183/215 (85.12%), Postives = 203/215 (94.42%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M+R+K+IKEVGDGTFGSVWRAI+KQ+GEVVA+KKMK+KYYS+EEC++LREVKSLR+M+HPNIVKLKEVIRENDILYF+ EYMECNLYQLMKDR K FSEAEVRNWCFQ+FQ LAYMHQRGYFHRDLKPENLLVSKD IK+ADFGLARE+ S PP+TEYVSTRWYRAPEVLLQS +Y S VDMWAMGAIMAEL+TL PLFPGTSEADEI KIC+VI
Sbjct:    1 MDRFKMIKEVGDGTFGSVWRAINKQNGEVVAVKKMKRKYYSFEECMSLREVKSLRRMNHPNIVKLKEVIRENDILYFIMEYMECNLYQLMKDRVKPFSEAEVRNWCFQIFQALAYMHQRGYFHRDLKPENLLVSKDVIKLADFGLAREVTSVPPYTEYVSTRWYRAPEVLLQSSIYDSAVDMWAMGAIMAELLTLHPLFPGTSEADEILKICNVI 215          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: CDKF3_ORYSJ (Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica GN=CDKF-3 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.898e-86
Identity = 142/215 (66.05%), Postives = 185/215 (86.05%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            MERYK+I+E+GDGT G+V+RA + ++ E+VA+KKMK+K++ WEEC++LREVK+L+K++HPNIVKLKEV  EN  L+F+FE MECNLY ++++R+  FSE E+RN+  Q+ QGLAYMH  GYFHRDLKPENLLV+  T+KIADFGLARE++S PP+T+YVSTRWYRAPEVLLQS  Y+  +DMWA+GAI+AEL TL PLFPG SE D++YKIC+V+
Sbjct:    1 MERYKVIREIGDGTCGNVFRAYNTETNEIVAVKKMKRKFFQWEECISLREVKALQKLNHPNIVKLKEVTMENHELFFIFENMECNLYDVIRERQAAFSEEEIRNFMVQILQGLAYMHNNGYFHRDLKPENLLVTDGTVKIADFGLAREVSSSPPYTDYVSTRWYRAPEVLLQSSAYTPAIDMWAVGAILAELFTLSPLFPGGSETDQLYKICAVL 215          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MAK_MOUSE (Serine/threonine-protein kinase MAK OS=Mus musculus GN=Mak PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.098e-85
Identity = 145/216 (67.13%), Postives = 186/216 (86.11%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL-VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M RY  +K++GDGT+GSV    S +SGE+VAIK+MK+K+YSW+EC+NLREVKSL+K++H N++KLKEVIREND LYFVFEYM+ NLYQLMKDR K F E+ +RN  +Q+ QGLA++H+ G+FHRD+KPENLL +  + +KIADFGLARE+ S+PP+T+YVSTRWYRAPEVLL+S +YSS +D+WA+G+IMAEL T RPLFPGTSE DEI+KIC V+
Sbjct:    1 MNRYTTMKQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVIRENDHLYFVFEYMKENLYQLMKDRNKLFPESVIRNIMYQILQGLAFIHKHGFFHRDMKPENLLCMGPELVKIADFGLARELRSQPPYTDYVSTRWYRAPEVLLRSSVYSSPIDVWAVGSIMAELYTFRPLFPGTSEVDEIFKICQVL 216          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MAK_RAT (Serine/threonine-protein kinase MAK OS=Rattus norvegicus GN=Mak PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.105e-85
Identity = 143/216 (66.20%), Postives = 186/216 (86.11%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL-VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M RY  ++++GDGT+GSV    S +SGE+VAIK+MK+K+YSW+EC+NLREVKSL+K++H N++KLKEVIREND LYF+FEYM+ NLYQLMKDR K F E+ +RN  +Q+ QGLA++H+ G+FHRD+KPENLL +  + +KIADFGLARE+ S+PP+T+YVSTRWYRAPEVLL+S +YSS +D+WA+G+IMAEL T RPLFPGTSE DEI+KIC V+
Sbjct:    1 MNRYTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVIRENDHLYFIFEYMKENLYQLMKDRNKLFPESVIRNIMYQILQGLAFIHKHGFFHRDMKPENLLCMGPELVKIADFGLARELRSQPPYTDYVSTRWYRAPEVLLRSSVYSSPIDVWAVGSIMAELYTFRPLFPGTSEVDEIFKICQVL 216          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MAK_HUMAN (Serine/threonine-protein kinase MAK OS=Homo sapiens GN=MAK PE=2 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 1.041e-84
Identity = 143/216 (66.20%), Postives = 186/216 (86.11%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL-VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M RY  ++++GDGT+GSV    S +SGE+VAIK+MK+K+YSW+EC+NLREVKSL+K++H N++KLKEVIREND LYF+FEYM+ NLYQLMKDR K F E+ +RN  +Q+ QGLA++H+ G+FHRD+KPENLL +  + +KIADFGLARE+ S+PP+T+YVSTRWYRAPEVLL+S +YSS +D+WA+G+IMAEL  LRPLFPGTSE DEI+KIC V+
Sbjct:    1 MNRYTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVIRENDHLYFIFEYMKENLYQLMKDRNKLFPESVIRNIMYQILQGLAFIHKHGFFHRDMKPENLLCMGPELVKIADFGLARELRSQPPYTDYVSTRWYRAPEVLLRSSVYSSPIDVWAVGSIMAELYMLRPLFPGTSEVDEIFKICQVL 216          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: ICK_RAT (Serine/threonine-protein kinase ICK OS=Rattus norvegicus GN=Ick PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.030e-84
Identity = 147/216 (68.06%), Postives = 183/216 (84.72%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL-VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M RY  IK++GDGT+GSV    S +SGE++AIKKMK+K+YSWEEC+NLREVKSL+K++H NIVKLKEVIREND LYF+FEYM+ NLYQL+K+R K F E+ +RN  +Q+ QGLA++H+ G+FHRDLKPENLL +  + +KIADFGLAREI SRPP+T+YVSTRWYRAPEVLL+S  YSS +D+WA+G IMAE+ TLRPLFPG SE D I+KIC V+
Sbjct:    1 MNRYTTIKQLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANIVKLKEVIRENDHLYFIFEYMKENLYQLIKERNKLFPESAIRNIMYQILQGLAFIHKHGFFHRDLKPENLLCMGPELVKIADFGLAREIRSRPPYTDYVSTRWYRAPEVLLRSTNYSSPIDVWAVGCIMAEVYTLRPLFPGASEIDTIFKICQVL 216          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: ICK_MOUSE (Serine/threonine-protein kinase ICK OS=Mus musculus GN=Ick PE=2 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 3.030e-84
Identity = 147/216 (68.06%), Postives = 183/216 (84.72%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL-VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M RY  IK++GDGT+GSV    S +SGE++AIKKMK+K+YSWEEC+NLREVKSL+K++H NIVKLKEVIREND LYF+FEYM+ NLYQL+K+R K F E+ +RN  +Q+ QGLA++H+ G+FHRDLKPENLL +  + +KIADFGLAREI SRPP+T+YVSTRWYRAPEVLL+S  YSS +D+WA+G IMAE+ TLRPLFPG SE D I+KIC V+
Sbjct:    1 MNRYTTIKQLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANIVKLKEVIRENDHLYFIFEYMKENLYQLIKERNKLFPESAIRNIMYQILQGLAFIHKHGFFHRDLKPENLLCMGPELVKIADFGLAREIRSRPPYTDYVSTRWYRAPEVLLRSTNYSSPIDIWAVGCIMAEVYTLRPLFPGASEIDTIFKICQVL 216          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: MHK_ARATH (Serine/threonine-protein kinase MHK OS=Arabidopsis thaliana GN=MHK PE=1 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 3.957e-84
Identity = 142/215 (66.05%), Postives = 187/215 (86.98%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M RYK+++E+GDGT GSV++A++ ++ EVVA+KKMK+K+Y WEECVNLREVK+LRK++HP+I+KLKE++RE++ L+F+FE M+ NLY +MK+RE+ FSE E+R++  Q+ QGLA+MH+ GYFHRDLKPENLLV+ + +KIADFGLARE+ S PP+TEYVSTRWYRAPEVLLQS LY+  VDMWA+GAI+AEL  L PLFPG SE D++YKIC V+
Sbjct:    9 MCRYKILEELGDGTCGSVYKAVNLETYEVVAVKKMKRKFYYWEECVNLREVKALRKLNHPHIIKLKEIVREHNELFFIFECMDHNLYHIMKERERPFSEGEIRSFMSQMLQGLAHMHKNGYFHRDLKPENLLVTNNILKIADFGLAREVASMPPYTEYVSTRWYRAPEVLLQSSLYTPAVDMWAVGAILAELYALTPLFPGESEIDQLYKICCVL 223          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: ICK_HUMAN (Serine/threonine-protein kinase ICK OS=Homo sapiens GN=ICK PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.964e-83
Identity = 144/216 (66.67%), Postives = 183/216 (84.72%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLL-VSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            M RY  I+++GDGT+GSV    S +SGE++AIKKMK+K+YSWEEC+NLREVKSL+K++H N+VKLKEVIREND LYF+FEYM+ NLYQL+K+R K F E+ +RN  +Q+ QGLA++H+ G+FHRDLKPENLL +  + +KIADFGLAREI S+PP+T+YVSTRWYRAPEVLL+S  YSS +D+WA+G IMAE+ TLRPLFPG SE D I+KIC V+
Sbjct:    1 MNRYTTIRQLGDGTYGSVLLGRSIESGELIAIKKMKRKFYSWEECMNLREVKSLKKLNHANVVKLKEVIRENDHLYFIFEYMKENLYQLIKERNKLFPESAIRNIMYQILQGLAFIHKHGFFHRDLKPENLLCMGPELVKIADFGLAREIRSKPPYTDYVSTRWYRAPEVLLRSTNYSSPIDVWAVGCIMAEVYTLRPLFPGASEIDTIFKICQVL 216          
BLAST of FC873302 vs. ExPASy Swiss-Prot
Match: Y8078_DICDI (Probable serine/threonine-protein kinase DDB_G0268078 OS=Dictyostelium discoideum GN=DDB_G0268078 PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.588e-77
Identity = 126/215 (58.60%), Postives = 176/215 (81.86%), Query Frame = 2
Query:  122 MERYKLIKEVGDGTFGSVWRAISKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRENDILYFVFEYMECNLYQLMKDREKCFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDTIKIADFGLAREINSRPPFTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELITLRPLFPGTSEADEIYKICSVI 766
            ME+Y+ IK+VGDG +G V +AI  ++GE+VAIK+MKKK+  W+EC+ LRE+K+L+K+ HPNIVKL E+I E D L+FVFEY+E NLY+ +KDR K   E  +RN  +Q+ Q L +MH  G+FHRDLKPEN+++  + +KIADFGLAREI S+PPFT+Y+STRWYRAPEVLL+   Y++ +D+WA+GAIMAEL +L+P+FPG+SE D+++KIC+++
Sbjct:    1 MEKYQFIKQVGDGAYGDVIKAIDVKTGEIVAIKRMKKKFSDWKECIQLREIKALKKLKHPNIVKLLEIILERDELFFVFEYLENNLYESIKDRTKLLPETTIRNIIYQILQALHFMHTNGFFHRDLKPENIMLVGERLKIADFGLAREIESKPPFTDYISTRWYRAPEVLLRCTYYNAPIDIWAVGAIMAELYSLKPMFPGSSEIDQLFKICTIM 215          
The following BLAST results are available for this feature:
BLAST of FC873302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKF4_ORYSJ4.345e-10785.12Cyclin-dependent kinase F-4 OS=Oryza sativa subsp.... [more]
CDKF3_ORYSJ1.898e-8666.05Cyclin-dependent kinase F-3 OS=Oryza sativa subsp.... [more]
MAK_MOUSE2.098e-8567.13Serine/threonine-protein kinase MAK OS=Mus musculu... [more]
MAK_RAT6.105e-8566.20Serine/threonine-protein kinase MAK OS=Rattus norv... [more]
MAK_HUMAN1.041e-8466.20Serine/threonine-protein kinase MAK OS=Homo sapien... [more]
ICK_RAT3.030e-8468.06Serine/threonine-protein kinase ICK OS=Rattus norv... [more]
ICK_MOUSE3.030e-8468.06Serine/threonine-protein kinase ICK OS=Mus musculu... [more]
MHK_ARATH3.957e-8466.05Serine/threonine-protein kinase MHK OS=Arabidopsis... [more]
ICK_HUMAN1.964e-8366.67Serine/threonine-protein kinase ICK OS=Homo sapien... [more]
Y8078_DICDI3.588e-7758.60Probable serine/threonine-protein kinase DDB_G0268... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BD10FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873302 ID=FC873302; Name=FC873302; organism=Citrus clementina; type=EST; length=770bp
TTTTGTTTAAATTTAACAGTTTTTTCTAGCAATTATCTTGGTACAATAAA
TGTCGTATAACTTCAAAGGTTCTTACACTTTTCTTGAATAAAGAAAGAGC
TGTTTCTGTTCCACAAGAAAAATGGAAAGGTACAAGTTAATTAAGGAAGT
TGGTGATGGAACATTTGGGAGTGTCTGGCGAGCTATTAGTAAGCAGTCTG
GTGAAGTTGTTGCAATTAAAAAAATGAAGAAAAAATATTATTCCTGGGAG
GAGTGTGTCAATTTGAGAGAAGTTAAGTCGCTACGGAAAATGAGTCATCC
AAACATTGTGAAGCTTAAGGAAGTCATCCGGGAAAATGATATCTTGTACT
TTGTTTTTGAATACATGGAATGTAACCTTTACCAACTTATGAAAGACAGA
GAGAAGTGTTTCTCTGAAGCTGAAGTCAGAAATTGGTGTTTCCAAGTTTT
CCAAGGTCTGGCTTACATGCATCAGCGGGGATATTTTCATCGTGACCTTA
AGCCTGAGAACTTGCTTGTTTCAAAAGACACAATTAAAATTGCTGATTTT
GGTCTTGCGCGTGAAATTAATTCACGTCCACCGTTCACGGAGTATGTCTC
AACACGATGGTATCGAGCTCCTGAAGTGCTGCTCCAGTCATACCTGTATA
GCTCTAAAGTTGATATGTGGGCAATGGGTGCTATCATGGCTGAGTTGATC
ACTCTCCGCCCTCTCTTTCCGGGTACCAGCGAAGCAGATGAAATATACAA
AATATGCAGTGTAATANGCA
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