FC873423
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: RRMJ1_HUMAN (Putative ribosomal RNA methyltransferase 1 OS=Homo sapiens GN=FTSJ1 PE=1 SV=2) HSP 1 Score: 276.944 bits (707), Expect = 9.338e-74 Identity = 135/207 (65.22%), Postives = 166/207 (80.19%), Query Frame = 2 Query: 203 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 823 MG+ S+DKRD+YYR AKE GWRARSAFKLLQ+D+EF +F+ V R VDLCAAPGSWSQVLS+K+ +G +VA+DLQ MAP+ GV+Q+QGDIT TA+ +I+HF GC ADLVVCDGAPDVTGLHD+DE++Q+QL+LA L + THVLK GG F+AKIFRG+D +LLY QL++FF V AKP+SSRNSSIEAFAVC+ Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKI---------GGQGS-GHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQ 197
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: RRMJ1_DICDI (rRNA methyltransferase 1 homolog OS=Dictyostelium discoideum GN=fsjA PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.548e-73 Identity = 135/206 (65.53%), Postives = 165/206 (80.10%), Query Frame = 2 Query: 203 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 820 MGK+S+DKRDIYYRKAKEEGWRARSAFKL+QIDEE+ IFE VKRVVDLCAAPGSWSQVLSR++Y K PD + IVA+DLQ MAP++GV+Q++GDIT T++ +I HFDG ADL++ DGAPDVTGLHD+D + QSQLIL+ L + TH LK GG F+AK+F+G D SL+Y Q+KLFF V+F KP SSR SS+E F +C Sbjct: 1 MGKSSKDKRDIYYRKAKEEGWRARSAFKLIQIDEEYQIFEGVKRVVDLCAAPGSWSQVLSRRIYGDGK-DPDVK------IVAVDLQEMAPLKGVVQIKGDITKYETSKQIISHFDGSLADLIISDGAPDVTGLHDIDFYGQSQLILSALNITTHTLKIGGTFVAKMFKGDDMSLMYSQMKLFFEHVSFVKPSSSRESSLENFILC 199
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: RRMJ1_CAEEL (Putative ribosomal RNA methyltransferase R74.7 OS=Caenorhabditis elegans GN=R74.7 PE=2 SV=3) HSP 1 Score: 269.626 bits (688), Expect = 1.491e-71 Identity = 133/206 (64.56%), Postives = 160/206 (77.67%), Query Frame = 2 Query: 203 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 820 MGK SRDKRDIYYR AKE WRARSAFKL+QID+EF I + V+R VDLCAAPGSWSQVLS++LY E IVAIDLQPMAPI GVIQ+QGDIT+ TA VI+HF G K+D+V+CDGAPDVTG+H +DEF+Q++LILA + +HVLKEGG F+AKIFR +++SLLY Q+K +F V AKP+SSR SS EAF +C Sbjct: 1 MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRLY---------EEDQEAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIKHFSGEKSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKEGGNFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLC 197
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: YEK3_SCHPO (Putative ribosomal RNA methyltransferase C4F10.03c OS=Schizosaccharomyces pombe GN=SPAC4F10.03c PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.153e-70 Identity = 131/209 (62.68%), Postives = 165/209 (78.95%), Query Frame = 2 Query: 203 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLY--LPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCE 823 MG++S+DKRD YYR AKE+GWRARSAFKLLQ++E+FN+FE KRVVDLCAAPGSWSQVLSR+L + ++ D + P+IVA+DLQPMAPI+GV +Q DIT+ T +++ HF ADLVV DGAPDVTGLHD+DE++Q+Q++LA + VLK GGKF+AKIFRG+D SLLY QL+L F V+ AKP+SSR SSIE+F VCE Sbjct: 1 MGRSSKDKRDAYYRLAKEQGWRARSAFKLLQLNEQFNLFEGAKRVVDLCAAPGSWSQVLSRELLKNIDTSIAADEK----PMIVAVDLQPMAPIDGVCTLQLDITHPNTLSIILSHFGNEPADLVVSDGAPDVTGLHDLDEYIQAQILLAAFNLAVCVLKPGGKFVAKIFRGRDVSLLYSQLRLMFRKVSCAKPRSSRASSIESFVVCE 205
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: RMJ1A_DROME (Putative ribosomal RNA methyltransferase CG5220 OS=Drosophila melanogaster GN=CG5220 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.217e-66 Identity = 128/207 (61.84%), Postives = 155/207 (74.88%), Query Frame = 2 Query: 203 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGC-KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 820 MGK S+DKRDIYYR+AK+EGWRARSAFKLL +DE + I V+R VDLCAAPGSWSQVLSRKLY + E I+A+DLQ MAPI G++Q+QGDIT TAE +I HF G KA LVVCDGAPDVTG+H+MDE++Q QL++A L++ T VL+ GG F+AKIF+G TSLL Q+++FF KP SSR SSIEAF VC Sbjct: 1 MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLYDTCETDD---EKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRPSSIEAFVVC 204
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: RMJ1B_DROME (Putative ribosomal RNA methyltransferase CG7009 OS=Drosophila melanogaster GN=CG7009 PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.652e-62 Identity = 122/205 (59.51%), Postives = 152/205 (74.15%), Query Frame = 2 Query: 203 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAV 817 MG+ S+DKRDI+YR AKE+GWRARSAFKLLQ DE F + E + R VDLCAAPGSWSQVL+++LY P L P+ RE I+A+DLQ MAPIEGV Q++ DI+ TAE +I F G KA +VV DGAPD TG+HD D +VQ +L+L+ L++ T +L+EGG F++KI+R TS LY QLK FF V KP +SRNSSIEAF V Sbjct: 1 MGRTSKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLYEP--LPPEEREK--VKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRNSSIEAFVV 201
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: TRM7_YEAST (tRNA (uridine-2'-O-)-methyltransferase TRM7 OS=Saccharomyces cerevisiae GN=TRM7 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.066e-61 Identity = 120/208 (57.69%), Postives = 157/208 (75.48%), Query Frame = 2 Query: 203 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEA--VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 820 MGK+S+DKRD+YYRKAKE+G+RARSAFKLLQ++++F+ + +KRVVDLCAAPGSWSQVLSRKL+ SP S + D IV++DLQPM+PI V +Q DIT+ +T +++ F KAD V DGAPDVTGLHD+DE+VQ QLI++ L + +LK+GG F+AKIFRG+D +LY QL F + AKP+SSR +S+EAF VC Sbjct: 1 MGKSSKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSWSQVLSRKLF---DESPSSDKEDRK-IVSVDLQPMSPIPHVTTLQADITHPKTLARILKLFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKGGTFVAKIFRGRDIDMLYSQLGYLFDKIVCAKPRSSRGTSLEAFIVC 204
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: SPB1_EMENI (AdoMet-dependent rRNA methyltransferase spb1 OS=Emericella nidulans GN=spb1 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.531e-36 Identity = 88/207 (42.51%), Postives = 118/207 (57.00%), Query Frame = 2 Query: 200 IMGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 820 I K + + D +YR AKE+G+RAR+AFKL+Q+++++ E K ++DLCAAPGSW QV + +PA+ LIV +DL P+ PI VI Q DIT + + H KAD V+ DGAP+V D F Q++L+L L + T L EGG F+ K+FR KD + L K F V KP SSRN S E F VC Sbjct: 3 IQKKHGKGRLDKWYRLAKEKGYRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE--CMPAQ----------SLIVGVDLAPIKPIPRVITFQQDITTEKCRATIRSHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLESLKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFMSVEATKPPSSRNVSAEIFVVC 197
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: SPB1_ASPFU (AdoMet-dependent rRNA methyltransferase spb1 OS=Aspergillus fumigatus GN=spb1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.009e-35 Identity = 84/207 (40.58%), Postives = 118/207 (57.00%), Query Frame = 2 Query: 200 IMGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 820 I K + + D +YR AKE+G+RAR+AFKL+Q+++++ E K ++DLCAAPGSW QV + +P + +I+ +DL P+ PI VI Q DIT + + +H KAD V+ DGAP+V D F Q++L+L + + T L EGG F+ K+FR KD + L K F V KP SSRN S E F VC Sbjct: 3 IQKKHGKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE--CMPTQ----------SIIIGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNVSAEIFVVC 197
BLAST of FC873423 vs. ExPASy Swiss-Prot
Match: SPB1_MAGGR (AdoMet-dependent rRNA methyltransferase SPB1 OS=Magnaporthe grisea GN=SPB1 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.009e-35 Identity = 85/207 (41.06%), Postives = 117/207 (56.52%), Query Frame = 2 Query: 200 IMGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEAVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVC 820 I K + + D +Y+ AKE+G+RAR+AFKL+Q+++++ E K ++DLCAAPGSW QV A++ P S LIV +DL P+ PI VI Q DIT + + +H KAD V+ DGAP+V D F Q++L L + + T L EGG F+ K+FR KD + + F V KP SSRN S E F VC Sbjct: 3 IQKKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVA-------AEVMPVSS-----LIVGVDLAPIKPIPKVITFQSDITTEKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDSFNQAELTLQAMKLATEFLVEGGTFVTKVFRSKDYNSMLWVFNQLFKKVEATKPPSSRNVSAEIFVVC 197 The following BLAST results are available for this feature:
BLAST of FC873423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 433
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873423 ID=FC873423; Name=FC873423; organism=Citrus clementina; type=EST; length=831bpback to top |