FC873436

Overview
NameFC873436
Unique NameFC873436
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length544
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig381 contig Ccv1_Contig381:186..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC873436 vs. ExPASy Swiss-Prot
Match: FB302_ARATH (F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.820e-22
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 3 
Query:    3 ANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLPLDCFIGLLTISPALQIKPEGLLLNA 209
            A  C QLK+I +W CR VT  GLL LVNKC +LESIN+WGTR+P+DCFI LLTISPALQIKP  LLLNA
Sbjct:  150 AERCHQLKTIGMWCCRHVTERGLLVLVNKCRKLESINLWGTRVPVDCFIALLTISPALQIKPMELLLNA 218
The following BLAST results are available for this feature:
BLAST of FC873436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB302_ARATH2.820e-2272.46F-box protein At5g67140 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI1CB08FM2 AbsDev Citrus clementina cDNA clone KN0AAI1CB08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873436 ID=FC873436; Name=FC873436; organism=Citrus clementina; type=EST; length=544bp
TTGCAAATAGCTGTCCACAACTAAAGAGTATCGTCCTGTGGAGCTGCCGT
CAGGTTACAGGGAATGGGCTTCTTTTCCTAGTAAATAAATGTGGCAGACT
TGAGTCTATCAATGTATGGGGAACCAGACTTCCTTTAGACTGCTTCATTG
GCTTGCTTACAATTAGTCCTGCTCTTCAGATAAAGCCTGAAGGACTGCTC
TTAAATGCTGGAGTTGCGTCTATGTTGCCTGTTGCATAAGGTGCCAATTC
ATGGTTGCCTTTCTTTTGCTCTTTGTAGAGGTTATTTGTTTCCCTTTGTA
TTTTCATATTCATAATAAAATTTGTAATCTTGATGAAAGAAACCTATTGT
TTCAACTCTGGCTTGTACAGTGGCAAAGCAATTGTATTCTTTTGTGCAAA
TGTATCAAGATAGAAGAATAAATTTGTATGTGGATATTAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAA
AAAACAAAGAAAAAAAAACCACAAAAGAAAAAAGAAAATGAAAA
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