FC873442
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_ARATH (Probable prefoldin subunit 5 OS=Arabidopsis thaliana GN=At5g23290 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.323e-58 Identity = 110/138 (79.71%), Postives = 127/138 (92.03%), Query Frame = 1 Query: 1 EKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTISDEAAVILQAKLKQLAPA 414 EKM ++QLKA+KEQ DLEVNLLQDSLNNIRTAT RL++A+ AL+DLSLRPQG KMLVPLTASLYVPGTLD+A KVLVDIGTGYF+EKTMD+GKDYC+RKINLLKSNFDQL EVA KKK+++DEA ++LQAK+KQL A Sbjct: 11 EKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEVAAKKKSVADEAGMVLQAKVKQLTAA 148
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_PONAB (Prefoldin subunit 5 OS=Pongo abelii GN=PFDN5 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20 Identity = 46/134 (34.33%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 4 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTISDEAAVILQAKLKQL 405 ++++ QL+ +K Q D EV L S+ ++ ++ A L+ L+ +G ++LVPLT+S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++ +K + ++ K++QL Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIRQL 142
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_MOUSE (Prefoldin subunit 5 OS=Mus musculus GN=Pfdn5 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20 Identity = 46/134 (34.33%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 4 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTISDEAAVILQAKLKQL 405 ++++ QL+ +K Q D EV L S+ ++ ++ A L+ L+ +G ++LVPLT+S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++ +K + ++ K++QL Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQQL 142
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_HUMAN (Prefoldin subunit 5 OS=Homo sapiens GN=PFDN5 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20 Identity = 46/134 (34.33%), Postives = 81/134 (60.45%), Query Frame = 1 Query: 4 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTISDEAAVILQAKLKQL 405 ++++ QL+ +K Q D EV L S+ ++ ++ A L+ L+ +G ++LVPLT+S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++ +K + ++ K++QL Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQQL 142
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_BOVIN (Prefoldin subunit 5 OS=Bos taurus GN=PFDN5 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20 Identity = 46/134 (34.33%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 4 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTISDEAAVILQAKLKQL 405 ++++ QL+ +K Q D EV L S+ ++ ++ A L+ L +G ++LVPLT+S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++ +K + ++ K++QL Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLKKNNEGKELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQQL 142
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_DICDI (Probable prefoldin subunit 5 OS=Dictyostelium discoideum GN=pfdn5 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 43/130 (33.08%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 7 MSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTISDEAAVILQAKL 396 +S+EQL+ ++EQ + E+ L +S+ ++ A+++ A A+ L G MLVPLT+S+Y+PG ++ KVLVDIGTGY+VE +++G+++ RK+ L+ +++ K+ + + Q+K+ Sbjct: 14 LSLEQLQMVREQVEAEIQQLSESIQQLKHASNKYIEAKEAMGGLK-GTDGKDMLVPLTSSIYLPGKINSNEKVLVDIGTGYYVEMGIEQGQNFSNRKVQLITEQVNKVQTAINMKRQNLESIVQVAQSKI 142
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_DROME (Probable prefoldin subunit 5 OS=Drosophila melanogaster GN=CG7048 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 43/137 (31.39%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 4 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTISDEAAVILQAKLKQLAPA 414 K+S EQL IK++ + E+ +QDSL+ + ++ + AL + ++LVPLT+S+YVPG + D ++ ++DIGTGY++EK ++ KDY +R++ ++ +++ ++ +K + +L+ +KQ A A Sbjct: 18 KLSPEQLIQIKQEFEQEITNVQDSLSTLHGCQAKYAGSKEALGTFQPNWENRQILVPLTSSMYVPGRVKDLNRFVIDIGTGYYIEKDLEGSKDYFKRRVEYVQEQIEKIEKIHLQKTRFYNSVMSVLE--MKQAAAA 152
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_YEAST (Prefoldin subunit 5 OS=Saccharomyces cerevisiae GN=GIM5 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 4 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRP-QGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTIS-DEAAVILQAKLKQ 402 K++ EQL A+K+Q D E+ SL + A + + +S +G K+LVP +ASLY+PG + D K +VDIGTGY+VEK+ + + ++K++ L Q+ ++ +K S A I QA ++Q Sbjct: 10 KLNPEQLNAVKQQFDQELQHFTQSLQALTMAKGKFTECIDDIKTVSQAGNEGQKLLVPASASLYIPGKIVDNKKFMVDIGTGYYVEKSAEAAIAFYQKKVDKLNKESVQIQDIIKEKTQYSLSIEAQIRQAAIRQ 144
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_SCHPO (Probable prefoldin subunit 5 OS=Schizosaccharomyces pombe GN=bob1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 7 MSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHD-LSLRPQGAKMLVPLTASLYVPGTLDDAH-KVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKTISDEAAVILQAK 393 +S+EQL + +Q D E+ L S + A + ++D + G ++LVPLT+SLYVPG L+ + K+LVDIGTGY+VEK+ E +Y +RK L S+ + L K I+Q K Sbjct: 13 LSLEQLSEVIKQLDSELEYLSTSYGQLGRAQLKFRECLANVNDAVRAENDGKEVLVPLTSSLYVPGKLNLGNSKLLVDIGTGYYVEKSAGEATEYYKRKCEYLASSIENLNNAIDAKSVQIRAVQNIMQQK 143
BLAST of FC873442 vs. ExPASy Swiss-Prot
Match: PFD5_CAEEL (Probable prefoldin subunit 5 OS=Caenorhabditis elegans GN=R151.9 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 42/135 (31.11%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 4 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDAHKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIEVATKKKT----ISDEAAVILQAKL 396 ++S++QL +++ + E+N Q+S N ++ +R E + +AL D+ + G L+PL+ SLY+ L D K LV+IGTGYFVE ++ K +RK + + + + +K+ ISD +Q++L Sbjct: 12 ELSLQQLGELQKNCEQELNFFQESFNALKGLLTRNEKSISALDDVKIATAGHTALIPLSESLYIRAELSDPSKHLVEIGTGYFVELDREKAKAIFDRKKEHITKQVETVEGILKEKRRTRAYISDAFQTKVQSQL 146 The following BLAST results are available for this feature:
BLAST of FC873442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873442 ID=FC873442; Name=FC873442; organism=Citrus clementina; type=EST; length=721bpback to top |