FC873530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_XENLA (Chitinase domain-containing protein 1 OS=Xenopus laevis GN=chid1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.114e-32 Identity = 69/198 (34.85%), Postives = 100/198 (50.51%), Query Frame = 2 Query: 14 KEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVF 598 K+ +DG V+E WS + R + + +G ALHS L + VI P P +++ FG + L+ VD FSLMTYD+S P PGPN+P+ W+ +QLL P R +KI LG++FYG D+ A+ G I G Y+ +L++HKP L W++ EH+ + KHAVF Sbjct: 182 KDEHFDGFVVEVWSQLGG-------QKRQELVHLLIHIGEALHSAK--------LHFILVIPPAVAPGTDQLGM--FGRKEFDQLAPVVDSFSLMTYDYSSPQRPGPNSPISWVQACVQLL--DPESKWR---KKILLGLHFYGMDYSALGAT-GEPILGNRYVEILKEHKPKLLWDQQIAEHYLEYKKNKGGKHAVF 356 HSP 2 Score: 49.2914 bits (116), Expect = 4.114e-32 Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 574 KSSQACCVYPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 K + YP+L SI +RL+ A+ GTGIAIWE+GQGLDY Sbjct: 349 KGGKHAVFYPTLKSIQVRLDLAEELGTGIAIWELGQGLDY 388
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_XENTR (Chitinase domain-containing protein 1 OS=Xenopus tropicalis GN=chid1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.512e-31 Identity = 70/197 (35.53%), Postives = 98/197 (49.75%), Query Frame = 2 Query: 14 KEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEKFQPH--DFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVF 598 K+ +DG V+E WS + R + + +G AL R L+ + VI PP H FG + L+ VD FSLMTYD+S P PGPN+P+ W+ +QLL P R +KI LG++FYG D+ AS G I G Y+ +L++HKP L W++ EH+ + KHAVF Sbjct: 183 KDERFDGFVVEVWSQLGG-------QKRQELVHLLTHIGEAL--------RLAKLRFILVI-PPALAPGTDHLGMFGRKEFDQLAPVVDSFSLMTYDYSSPQRPGPNSPITWVQACIQLL--DPESKWR---KKILLGLHFYGMDYSALGAS-GEPILGNRYIEILKEHKPKLLWDQQIAEHYLEYKKNKGGKHAVF 357 HSP 2 Score: 46.595 bits (109), Expect = 7.512e-31 Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 574 KSSQACCVYPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 K + +P+L SI +RL+ A+ GTGI+IWE+GQGLDY Sbjct: 350 KGGKHAVFFPTLKSIQVRLDLAEELGTGISIWELGQGLDY 389
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_DANRE (Chitinase domain-containing protein 1 OS=Danio rerio GN=chid1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.371e-29 Identity = 74/201 (36.82%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 2 LTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEKF-QPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWI-SFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVF 598 L K +DG LE WS N E + + + ++N+ + L V VI P + QP FG D + L+ VD FSLMTYD+SGP PGP+APL W+ LQL KI LG+N YG DF S G + G + LL++ KP LQW++N+GEHFF + N VKH V+ Sbjct: 177 LEVAKAEGFDGYTLELWSQLGG----------NKRKELVHLVTHLCETLNAGK-----LTCVLVIPPSVAPGTGQPGMFGRDDFEKLAPVVDAFSLMTYDYSGPGRPGPSAPLPWVRECVLQL------APENQWRHKILLGVNMYGLDF--SSHGGAEPLLGARCIELLKEVKPKLQWDENTGEHFFNYKRNNGVKHVVY 354 HSP 2 Score: 41.2022 bits (95), Expect = 1.371e-29 Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 598 YPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 YP+L + +R+ A GTGI++WE+GQGLDY Sbjct: 355 YPTLKFLQLRISLAAELGTGISMWELGQGLDY 386
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_PONAB (Chitinase domain-containing protein 1 OS=Pongo abelii GN=CHID1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.025e-29 Identity = 66/201 (32.84%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 14 KEMEYDGIVLESWSTWTAY---GILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVF 598 K +DG V+E W+ + G++H + L ALH L + VI P P +++ F + + L+ +DGFSLMTYD+S H PGPNAPL W+ +Q+L P RS KI LG+NFYG D+ S+ + G Y+ L+ H+P + W+ + EHFF + +H VF Sbjct: 182 KNQHFDGFVVEVWNQLLSQKRVGLIH----------MLTHLAEALHQAR--------LLALLVIPPAITPGTDQLGM--FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVL--DPKSKWRS---KILLGLNFYGMDYATSK-DAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVF 356 HSP 2 Score: 46.595 bits (109), Expect = 3.025e-29 Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 574 KSSQACCVYPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 +S + YP+L S+ +RLE A+ G G++IWE+GQGLDY Sbjct: 349 RSGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDY 388
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_HUMAN (Chitinase domain-containing protein 1 OS=Homo sapiens GN=CHID1 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.025e-29 Identity = 66/201 (32.84%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 14 KEMEYDGIVLESWSTWTAY---GILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVF 598 K +DG V+E W+ + G++H + L ALH L + VI P P +++ F + + L+ +DGFSLMTYD+S H PGPNAPL W+ +Q+L P RS KI LG+NFYG D+ S+ + G Y+ L+ H+P + W+ + EHFF + +H VF Sbjct: 182 KNQHFDGFVVEVWNQLLSQKRVGLIH----------MLTHLAEALHQAR--------LLALLVIPPAITPGTDQLGM--FTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVL--DPKSKWRS---KILLGLNFYGMDYATSK-DAREPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVF 356 HSP 2 Score: 46.595 bits (109), Expect = 3.025e-29 Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 574 KSSQACCVYPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 +S + YP+L S+ +RLE A+ G G++IWE+GQGLDY Sbjct: 349 RSGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDY 388
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_RAT (Chitinase domain-containing protein 1 OS=Rattus norvegicus GN=Chid1 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.918e-28 Identity = 67/201 (33.33%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 14 KEMEYDGIVLESWSTWTAY---GILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVF 598 K +DG V+E WS + G++H + L ALH L ++ VI P P +++ F + + L+ +DGFSLMTYD+S PGPNAPL WI +Q+L P RS KI LG+NFYG D+ S+ + G Y+ L+ H+P + W+ + EHFF + +H VF Sbjct: 182 KNQHFDGFVVEVWSQLLSQKHVGLIH----------MLTHLAEALHQAR--------LLVILVIPPAVTPGTDQLGM--FTHKEFEQLAPILDGFSLMTYDYSTSQQPGPNAPLSWIRACVQVL--DPKSQWRS---KILLGLNFYGMDYAASK-DAREPVIGARYIQTLKDHRPRVVWDSQAAEHFFEYKKNRGGRHVVF 356 HSP 2 Score: 45.8246 bits (107), Expect = 1.918e-28 Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 598 YPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 YP+L S+ +RLE A+ G G++IWE+GQGLDY Sbjct: 357 YPTLKSLQVRLELARELGVGVSIWELGQGLDY 388
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_MOUSE (Chitinase domain-containing protein 1 OS=Mus musculus GN=Chid1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.497e-28 Identity = 67/201 (33.33%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 14 KEMEYDGIVLESWSTWTAY---GILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVF 598 K +DG V+E WS + G++H + L ALH L ++ VI P P +++ F + + L+ +DGFSLMTYD+S PGPNAPL WI +Q+L P RS KI LG+NFYG D+ S+ + G Y+ L+ H+P + W+ + EHFF + +H VF Sbjct: 182 KNQHFDGFVVEVWSQLLSQKHVGLIH----------MLTHLAEALHQAR--------LLVILVIPPAVTPGTDQLGM--FTHKEFEQLAPILDGFSLMTYDYSTSQQPGPNAPLSWIRACVQVL--DPKSQWRS---KILLGLNFYGMDYAASK-DAREPVIGARYVQTLKDHRPRVVWDSQAAEHFFEYKKNRGGRHVVF 356 HSP 2 Score: 45.8246 bits (107), Expect = 2.497e-28 Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 598 YPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 YP+L S+ +RLE A+ G G++IWE+GQGLDY Sbjct: 357 YPTLKSLQVRLELARELGVGVSIWELGQGLDY 388
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_BOVIN (Chitinase domain-containing protein 1 OS=Bos taurus GN=CHID1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.745e-26 Identity = 65/202 (32.18%), Postives = 96/202 (47.52%), Query Frame = 2 Query: 14 KEMEYDGIVLESWSTWTAY---GILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGPPH----SEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVF 598 K +DG+V+E W+ G++H + + ALH Q LV+++ PP + K F + + L+ +DGFSLMTYD+S GPNAPL W+ +Q+L P RS KI LG+NFYG D+ S+ I G Y+ L+ H+P + W+ + EHFF + +H VF Sbjct: 182 KSQHFDGLVVEVWNQLLVQKHAGLIH----------LLTHMAEALH---------QARLLVFLVIPPAVAPGTNKLGM--FTNTEFEQLAPVLDGFSLMTYDYSTAQPAGPNAPLPWVRACVQVL--DPKSKWRS---KILLGLNFYGMDYSASK-DAREPIIGARYIQTLKDHRPQVVWDSQAAEHFFEYKKSRGGRHVVF 356 HSP 2 Score: 43.8986 bits (102), Expect = 3.745e-26 Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 1 Query: 598 YPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 YP+L S+ RLE A+ G G++IWE+GQGLDY Sbjct: 357 YPTLKSLQERLELAQELGVGLSIWELGQGLDY 388
BLAST of FC873530 vs. ExPASy Swiss-Prot
Match: CHID1_DICDI (Chitinase domain-containing protein 1 OS=Dictyostelium discoideum GN=chid1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.016e-25 Identity = 66/189 (34.92%), Postives = 107/189 (56.61%), Query Frame = 2 Query: 14 KEMEYDGIVLESWSTWTAYGILH-DPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHK-PALQWEKNSGEHFFFFSDE 574 K+ YDG+V+E GI+H + +LR+ F+ L LHS+ K+ + ++Y P +K Q FG D + LS+ +DG SLMTYDF GP + G NAP W+ L+ LL + G ++KIF+GI FYG + + E AI G E++++L+++K L++++N+ EH F + ++ Sbjct: 179 KKNNYDGLVIE--------GIVHINKQLRD---PFLISLSEKLHSIG-----KEIILVIY----PFRQKGQETGFGAKDFELLSNHIDGVSLMTYDF-GP-SGGMNAPKVWVEDNLKFLLPN---GENKNSKKIFMGIPFYG--YKIGENDQSDAIVGSEFISVLKQNKSKKLKFDQNTHEHIFTYKNK 340 HSP 2 Score: 44.2838 bits (103), Expect = 4.016e-25 Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 1 Query: 574 KSSQACCVYPSLISISMRLEEAKLWGTGIAIWEIGQGLDY 693 K+ Q YPSL+ I R++ A + I+IWEIGQGLDY Sbjct: 341 KNQQVSMTYPSLLFIEDRIQLANKYKVSISIWEIGQGLDY 380 The following BLAST results are available for this feature:
BLAST of FC873530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873530 ID=FC873530; Name=FC873530; organism=Citrus clementina; type=EST; length=863bpback to top |