FC873538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1Z_ARATH (Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.341e-32 Identity = 65/78 (83.33%), Postives = 73/78 (93.59%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 236 D+ T+AELEVQEK LLEWFANEY+RFGCTLEFVTNKSQEGSQFCRGFGGIGG+LRYQLDMR+FDE S DGE+Y+DS+ Sbjct: 359 DAETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDMRTFDELS-DGEVYEDSD 435
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1Y_ARATH (Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.897e-32 Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 236 DS T+AELEVQEK LLEWFANEY+RFGCTLEFVTNKSQEGSQFCRGFGGIGG+LRYQLDMR+FDE SD E+Y+DS+ Sbjct: 358 DSETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDMRTFDELSDT-EVYEDSD 434
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1X_ARATH (Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis thaliana GN=ERF1-1 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.275e-26 Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 3 Query: 24 LEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 230 L+V+EK SLLEW ANEYRRFGC LEFVTNKSQEGSQFCRGFGGIGGILRYQLDM +FD S+DGE DD Sbjct: 367 LDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDMTAFD--SEDGEALDD 433
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1_POLMI (Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa misakiensis GN=ERF1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.574e-20 Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 230 D T E+E+ E SLLEWFAN Y++FG TLE VT++SQEGSQF +GFGGIGG+LRY++D + + DD ++YDD Sbjct: 359 DKDTGVEMEMVESCSLLEWFANNYKKFGSTLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDFQGMEFNDDDPDLYDD 434
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1_DICDI (Eukaryotic peptide chain release factor subunit 1 OS=Dictyostelium discoideum GN=erf1 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.507e-20 Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSD-DGEIYDDSE 236 D + + E+ E+ ++EWFAN Y+ FG +LEFVTNKSQEGSQFC+GFGG+GG+LRYQ+D ++F + D YDDS+ Sbjct: 360 DKESGLDYEIVEEMPIVEWFANNYKNFGASLEFVTNKSQEGSQFCKGFGGLGGLLRYQVDFAQLNDFDNPDENEYDDSD 438
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1_XENLA (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus laevis GN=etf1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18 Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 227 D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + D D E +D Sbjct: 359 DKETGQEHELIESMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMDYQGVDDEFFD 433
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1_DROME (Eukaryotic peptide chain release factor subunit 1 OS=Drosophila melanogaster GN=eRF1 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.924e-18 Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRS--FDEFSDDGEIYDD 230 D + E+E+ E LLEW AN Y+ FG TLE +T+KSQEGSQF RGFGGIGGILRY++D +S DE +DG DD Sbjct: 360 DKESGVEMELIESQPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQSMQLDELDNDGFDLDD 437
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1_XENTR (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus tropicalis GN=etf1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18 Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 227 D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 359 DKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1_RAT (Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus GN=Etf1 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18 Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 227 D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 359 DKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433
BLAST of FC873538 vs. ExPASy Swiss-Prot
Match: ERF1_RABIT (Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus cuniculus GN=ETF1 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18 Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 3 DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 227 D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 359 DKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433 The following BLAST results are available for this feature:
BLAST of FC873538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873538 ID=FC873538; Name=FC873538; organism=Citrus clementina; type=EST; length=833bpback to top |