FC873545

Overview
NameFC873545
Unique NameFC873545
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length807
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1233 contig Ccv1_Contig1233:3..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 7.738e-86
Identity = 165/198 (83.33%), Postives = 173/198 (87.37%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNH-TPHPN-NTWIV-DSTSHIQPDELSGPR 586
            KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV            VD D++GNY +EEVEQLIQVALLCTQ SPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFN+ T HP  + WI+ DSTS I+ +  SGPR
Sbjct:  418 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPTHHPAVSGWIIGDSTSQIENEYPSGPR 615          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 3.251e-84
Identity = 153/195 (78.46%), Postives = 170/195 (87.18%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVDSTSHIQPDELSGPR 586
            KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQRAFDLARLANDDDVMLLDWV            VD D++ NY E E+EQ+IQVALLCTQGSPMERPKMSEVVRMLEGDGLAE+W+EWQK E+ R++ + +P+PN+ WI+DST ++   ELSGPR
Sbjct:  431 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWDEWQKVEILREEIDLSPNPNSDWILDSTYNLHAVELSGPR 625          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 9.459e-84
Identity = 153/195 (78.46%), Postives = 166/195 (85.13%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVDSTSHIQPDELSGPR 586
            KAANILLDEEFEAVVGDFGLA+LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQRAFDLARLANDDDVMLLDWV            VD D++ NY E EVEQLIQVALLCTQ SPMERPKMSEVVRMLEGDGLAE+W+EWQK E+ RQ+   + HP + WI+DST ++   ELSGPR
Sbjct:  434 KAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAEKWDEWQKVEVLRQEVELSSHPTSDWILDSTDNLHAMELSGPR 628          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 4.113e-79
Identity = 151/198 (76.26%), Postives = 164/198 (82.83%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHT--PHPNNTWIVD-STSHIQPDELSGPR 586
            KAANILLDEEFEAVVGDFGLAKLM+Y D+HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ+AFDLARLANDDD+MLLDWV            VD+++EG Y+E EVEQLIQ+ALLCTQ S MERPKMSEVVRMLEGDGLAERWEEWQKEEM   DFN+   PH    W++  S S I+ D  SGPR
Sbjct:  404 KAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGDGLAERWEEWQKEEMPIHDFNYQAYPHAGTDWLIPYSNSLIENDYPSGPR 601          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 4.113e-79
Identity = 151/198 (76.26%), Postives = 164/198 (82.83%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHT--PHPNNTWIVD-STSHIQPDELSGPR 586
            KAANILLDEEFEAVVGDFGLAKLM+Y D+HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ+AFDLARLANDDD+MLLDWV            VD+++EG Y+E EVEQLIQ+ALLCTQ S MERPKMSEVVRMLEGDGLAERWEEWQKEEM   DFN+   PH    W++  S S I+ D  SGPR
Sbjct:  423 KAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGDGLAERWEEWQKEEMPIHDFNYQAYPHAGTDWLIPYSNSLIENDYPSGPR 620          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.087e-63
Identity = 125/195 (64.10%), Postives = 147/195 (75.38%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTWIVDSTSHIQPDELSGPR 586
            KAAN+LLDE+FEAVVGDFGLAKL+D + T+VTT VRGT+GHIAPEYLSTGKSSE+TDVFGYG+MLLEL+TGQRA D +RL  +DDV+LLD V            VD +++G YI+EEVE +IQVALLCTQGSP +RP MSEVVRMLEG+GLAERWEEWQ  E+ R+           W  DS  +    ELSG R
Sbjct:  419 KAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLEGEGLAERWEEWQNVEVTRRHEFERLQRRFDWGEDSMHNQDAIELSGGR 613          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.991e-49
Identity = 103/178 (57.87%), Postives = 126/178 (70.79%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPHPNNTW 535
            KAANILLDE FEAVVGDFGLAKL++++D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELITG RA +  +  +    M L+WV            VD ++   Y   EV +++QVALLCTQ  P  RPKMSEVV+MLEGDGLAERW           D +H  H N ++
Sbjct:  424 KAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAM-LEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLEGDGLAERWAA-------SHDHSHFYHANMSY 593          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.132e-43
Identity = 98/196 (50.00%), Postives = 132/196 (67.35%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHT-PHPNNTWIVDSTSHIQPDELSGPR 586
            KAANILLDE FEA+VGDFGLAKL+D +D+HVTTAVRGTIGHIAPEYLSTG+SSEKTDVFG+GV++LELITG +  D          M+L WV            VD D++G + +  +E+++++ALLCTQ  P  RP+MS+V+++LE  GL E+ E   +        N++  H   ++I+++       ELSGPR
Sbjct:  428 KAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGN-GQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLE--GLVEQCEGGYEARAPSVSRNYSNGHEEQSFIIEAI------ELSGPR 614          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.136e-28
Identity = 64/149 (42.95%), Postives = 96/149 (64.43%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 448
            KA+NIL+D+EF A + DFGLAKL+D  ++H+TT V GT G++APEY +TG  +EK+D++ +GV+LLE ITG+   D  R AN  +V L++W+            VD  +E    +  +++ + V+L C      +RP+MS+V RMLE D
Sbjct:  311 KASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPAN--EVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESD 457          
BLAST of FC873545 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.530e-28
Identity = 63/148 (42.57%), Postives = 92/148 (62.16%), Query Frame = 2
Query:    2 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 445
            KA+N+LLD++  A + DFGLAKL D  +TH++T + GTIG++APEY   G  +EK DV+ +GV+ LE+++G+   +      +D V LLDW             VD  +  +Y EEE   ++ VAL+CT  SP  RP MS+VV ++EG
Sbjct:  807 KASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFR--PTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEG 952          
The following BLAST results are available for this feature:
BLAST of FC873545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
BAK1_ARATH7.738e-8683.33BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK1_ARATH3.251e-8478.46Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK2_ARATH9.459e-8478.46Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK5_ARATH4.113e-7976.26Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH4.113e-7976.26Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5129_ARATH1.087e-6364.10Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH1.991e-4957.87Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH2.132e-4350.00Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH1.136e-2842.95Probable receptor-like protein kinase At2g42960 OS... [more]
Y1765_ARATH2.530e-2842.57Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3BE09FM1 AbsDev Citrus clementina cDNA clone KN0AAI3BE09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873545 ID=FC873545; Name=FC873545; organism=Citrus clementina; type=EST; length=807bp
GAAAGCCGCTAATATATTGTTGGATGAGGAATTTGAAGCTGTTGTTGGAG
ATTTCGGGTTGGCTAAACTCATGGATTACAAAGACACACACGTTACAACC
GCTGTACGTGGAACAATCGGACATATAGCTCCAGAGTACCTCTCTACTGG
AAAGTCGTCAGAGAAGACTGATGTTTTTGGGTATGGAGTCATGCTTCTTG
AACTCATCACGGGGCAGAGAGCTTTTGATCTTGCTCGGCTTGCTAATGAC
GACGACGTTATGCTGCTTGATTGGGTAAAAGGACTTCTGAAAGAGAAGAA
GTTGGAACAGTTGGTTGATAGCGACATGGAGGGCAACTACATTGAGGAAG
AAGTGGAGCAGCTGATCCAGGTTGCTCTTCTGTGCACACAAGGGTCCCCA
ATGGAGCGACCGAAGATGTCAGAGGTGGTAAGAATGCTGGAAGGCGATGG
ATTGGCTGAAAGATGGGAGGAATGGCAGAAAGAAGAGATGTTCCGGCAAG
ATTTTAACCATACACCACACCCCAATAATACTTGGATTGTCGACTCAACT
TCTCACATCCAGCCAGATGAATTGTCTGGTCCTAGATGATATGGAAGTCT
TCTTGATGTGCTTTTTGTATGTGAAAGTGATATTTATAACATTTGTGCAT
ATAGGTTCCTTCTTCTTTTTCCCATTTTAATGTCCAGTTTATATTACAAA
TTGTACTTGTTTAGGCAATGTTGTAATTTTCTATAGGGTTGCCAAAGTCT
ATCGAGGAACTTTAGGTGCTAGCAAACAAGCGGGCATCCATGTCATGTCA
TCCTGTG
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