FC873645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.159e-45 Identity = 109/198 (55.05%), Postives = 126/198 (63.64%), Query Frame = 2 Query: 122 SNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGNXXXXXXXXXXXXXXXXXEHKPSL---GPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPGGGFWALPARPDFGQVWSF 706 +N+DG SNGA+I+ QQP ++ VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE FST SVS+RG N +HKP+ G +PFILGKRVR+D EDS ++ ++VG T GFWA+PARPDFGQVWSF Sbjct: 12 NNNDGLMIS-SNGALIE---QQP----SVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATN-------------STSLDHKPTSLLGGTSPFILGKRVRAD------EDSNNSHNHSSVGKDETFTTTPAGFWAVPARPDFGQVWSF 182
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.310e-42 Identity = 106/209 (50.72%), Postives = 119/209 (56.94%), Query Frame = 2 Query: 119 MSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGNXXXXXXXXXXXXXXXXXEHKPSLGPAPFILGKRVRSDDDGTKGEDSISAVGPATVGPIVGPATPG----GGFWALPARPDFGQVWSFXXXXXPEMV 733 M+++DGA VSNG I++ + P N VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE FST S+S +PF LGKRV ++G G G TVG +G + G GGFWA+PARPDFGQVWSF PEMV Sbjct: 1 MADNDGA---VSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLST-----------------------------SSPFTLGKRVVRAEEGESGG---GGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFATGAPPEMV 171
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.982e-24 Identity = 74/176 (42.05%), Postives = 91/176 (51.70%), Query Frame = 2 Query: 101 ILPGAHMSNSDGATNGVSNGAIIDPQRQQPPGNGALTVK---KPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGNXXXXXXXXXXXXXXXXXEHKPSLGPAPF-ILGKRVRSDDDGTKGEDSISAVGPA 616 I G H + S AT+ S + G+ VK K P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAE FST++ S+R GG K S P F G + D++GT G S+V P+ Sbjct: 28 ISSGQHGNISTSATSSTSTSS----------GSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGG-----------STLFSQASKSSSSPLSFHSTGMSLYEDNNGTNG----SSVDPS 178
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.322e-23 Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 122 SNSDGATNGVSNGA--IIDPQ-----RQQPPGNGAL---------TVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGN 457 +N+D A GA ++D R PP + L T K +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAE FST+SVS+R G+ Sbjct: 9 NNNDTAAVATGGGARQLVDASLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGS 136
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP23_ARATH (Transcription factor TCP23 OS=Arabidopsis thaliana GN=TCP23 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.174e-23 Identity = 59/115 (51.30%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 113 AHMSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGN 457 AH+ S G +G + P A T K PSKDRH KVDGRGRRIRMP ICAARVFQLTREL HKSDG+TIEWLL+QAE ST+++S+R G+ Sbjct: 17 AHLVPSMGPISGSVSLTTTAPNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAATGTGTIPANISTLNISLRSSGS 131
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.720e-22 Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 197 NGALTVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGN 457 + + KKPP +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAE F+++++S+R G+ Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGS 193
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: PCF3_ORYSJ (Transcription factor PCF3 OS=Oryza sativa subsp. japonica GN=PCF3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.842e-21 Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 2 Query: 101 ILPGAHMSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGN 457 I+P A G + + +++ GA K P+KDRH+KV+GRGRRIRMP +CAARVFQLTRELGHK+DG+TIEWLL+QAE FS+++VS+R + Sbjct: 112 IVPAAAAPGGGGGQVQAAAAPVASSEKKAVVAAGAGA--KRPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGTIPANFSSLAVSLRSAAS 228
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.840e-20 Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 131 DGATNGVSNGAIIDPQRQQPPGNGALTVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVR 445 D +T+ S I +P KKPP +KDRH+KV+GRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAE F+++++S+R Sbjct: 19 DSSTSSSSTSLAIISTTSEPNSEP----KKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLR 124
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.010e-18 Identity = 41/53 (77.36%), Postives = 50/53 (94.34%), Query Frame = 2 Query: 215 KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 373 K+ +KDRH+KV+GRGRRIRMP +CAAR+FQLTRELGHKSDG+TI+WLL+QAE Sbjct: 74 KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 126
BLAST of FC873645 vs. ExPASy Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.319e-18 Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 188 PPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 373 PP + +K+ +KDRH+KV+GRGRRIRMP CAAR+FQLTRELGHKSDG+TI WLL AE Sbjct: 62 PPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAE 123 The following BLAST results are available for this feature:
BLAST of FC873645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873645 ID=FC873645; Name=FC873645; organism=Citrus clementina; type=EST; length=781bpback to top |