FC873678

Overview
NameFC873678
Unique NameFC873678
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.291e-99
Identity = 182/202 (90.10%), Postives = 192/202 (95.05%), Query Frame = 2
Query:    2 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVV 607
            AA+ +K NLFSNLIRHPKFISDT +AIADAY+ TDSEFLKSEN+QNRDAGSTASTAI VGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQ+DERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEE +DSSLEFLILASDGLWDVV+NEEAV MIK I+DPEE AKRLM EAYQRGSAD+ITCVVV
Sbjct:   76 AAEYVKQNLFSNLIRHPKFISDTTAAIADAYNQTDSEFLKSENSQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIKAIEDPEEGAKRLMMEAYQRGSADNITCVVV 277          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 3.291e-95
Identity = 170/205 (82.93%), Postives = 194/205 (94.63%), Query Frame = 2
Query:    2 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVVPVL 616
            AA+ +K +LFSNLI+HPKFISD KSAIA+ Y+HTDSEFLK+E++  RDAGSTASTAI VGDRLLVANVGDSRAV+CRGG+AIAVSRDHKPDQ+DERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD+LLKQYVVADPEI+EE++DSSLEFLILASDGLWDVV+N+EAV M++PIQDPE+AAKRL+QEAYQRGSAD+IT V+V  L
Sbjct:  125 AAEYVKQHLFSNLIKHPKFISDIKSAIAETYNHTDSEFLKAESSHTRDAGSTASTAILVGDRLLVANVGDSRAVVCRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPIQDPEQAAKRLLQEAYQRGSADNITVVIVRFL 329          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 6.206e-94
Identity = 171/205 (83.41%), Postives = 190/205 (92.68%), Query Frame = 2
Query:    2 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVVPVL 616
            AA+ +K NLF+NLI+HPK  SDTKSAIA+ Y+ TDSE LK+E + NRDAGSTASTAI VGDRLLVANVGDSRAVICRGG+AIAVSRDHKPDQ+DERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD+LLKQYVVADPEI+EEV+DSSLEFLILASDGLWDVVTNEEAVAM+KPI D E+AAK+L+QEA QRGSAD+ITC+VV  L
Sbjct:  107 AAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDSELLKAETSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPILDSEQAAKKLLQEASQRGSADNITCLVVRFL 311          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 4.023e-93
Identity = 170/205 (82.93%), Postives = 188/205 (91.71%), Query Frame = 2
Query:    2 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVVPVL 616
            AA+ +K +LFSNLI HPKFISDTKSAIADAY+HTDSE LKSEN+  RDAGSTASTAI VGDRLLVANVGDSRAVICRGGNA AVSRDHKPDQ+DER+RIE+AGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEE ID SLEFLILASDGLWDV +NEEAVA++K ++DPEE+ K+L+ EA +RGSAD+ITCVVV  L
Sbjct:   76 AAEYVKRHLFSNLITHPKFISDTKSAIADAYTHTDSELLKSENSHTRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVKEVEDPEESTKKLVGEAIKRGSADNITCVVVRFL 280          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 3.765e-91
Identity = 167/205 (81.46%), Postives = 187/205 (91.22%), Query Frame = 2
Query:    2 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVVPVL 616
            AA+ +K +LFSNLI HPKFISDTKSAI DAY+HTDSE LKSEN+ NRDAGSTASTAI VGDRL+VANVGDSRAVI RGG AIAVSRDHKPDQ+DER+RIE+AGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEE ID +LEFLILASDGLWDV +NE AVAM+K ++DPE++AK+L+ EA +RGSAD+ITCVVV  L
Sbjct:   76 AAEYVKRHLFSNLITHPKFISDTKSAITDAYNHTDSELLKSENSHNRDAGSTASTAILVGDRLVVANVGDSRAVISRGGKAIAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDTLEFLILASDGLWDVFSNEAAVAMVKEVEDPEDSAKKLVGEAIKRGSADNITCVVVRFL 280          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 328.561 bits (841), Expect = 1.582e-89
Identity = 165/204 (80.88%), Postives = 185/204 (90.69%), Query Frame = 2
Query:    5 ADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVVPVL 616
            A+ +K NLFS+L+RHPKFISDTK AI DAY  TDSEFL+S+++QN+  GSTASTA+ VGDRL VANVGDSRA+ICRGGNAIAVS+DHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD+LLKQYVV DPEI+EEVID SLEFLILASDGLWDVVTNEEAV M + I DPEEAAK+L+QEAY+R S+D+ITCVVV  L
Sbjct:   71 AEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQ-CGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVVVRFL 273          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.101e-74
Identity = 135/202 (66.83%), Postives = 172/202 (85.15%), Query Frame = 2
Query:    2 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVV 607
            AA+ LK +LF NL++HP+F+++TK AI++ Y  TDSEFL SE++ +RD GSTASTA+ VG+ L VANVGDSRAVI + G AIA+S DHKP+++DER+RIE AGG VMWAGTWRVGGVLA+SRAFG+RLLKQ+VVADPEIQE+ ID  LEFLILASDGLWDVV NE+AV+++K  ++PE AA++L + A+ RGS D+ITC+VV
Sbjct:  272 AAEYLKEHLFENLMKHPEFMTNTKLAISETYKKTDSEFLDSESHTHRDDGSTASTAVLVGNHLYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGGVVMWAGTWRVGGVLAMSRAFGNRLLKQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLVKIEEEPEAAARKLTETAFSRGSGDNITCIVV 473          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 5.113e-72
Identity = 130/202 (64.36%), Postives = 168/202 (83.17%), Query Frame = 2
Query:    2 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVV 607
            AA+ LK NLF NL++HP+F++DTK AI++ Y  TD++FL+SE+N  RD GSTASTA+ VG  L VANVGDSRAV+ + G A+A+S DHKP+++DER+RIE+AGG V+WAGTWRVGGVLA+SRAFG+RLLK +VVA+PEIQEE+++  LE L+LASDGLWDVV NEEAV++ K    PE  A++L + AY RGSAD+ITC+VV
Sbjct:  154 AAEYLKENLFENLLKHPEFLTDTKLAISETYQKTDTDFLESESNAFRDDGSTASTAVLVGGHLYVANVGDSRAVVSKAGKAMALSEDHKPNRSDERKRIENAGGVVIWAGTWRVGGVLAMSRAFGNRLLKPFVVAEPEIQEELVNEDLECLVLASDGLWDVVENEEAVSLAKTEDLPESVARKLTEIAYSRGSADNITCIVV 355          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 1.488e-71
Identity = 131/205 (63.90%), Postives = 167/205 (81.46%), Query Frame = 2
Query:    2 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVVPVL 616
            AA+ LK +LF NL++HP FI+DTKSAI++ Y  TDS+FL +E N NR+ GSTASTAI VG+ + VANVGDSR V+ + G AIA+S DHKP++ DER+RIE+AGG V W+GTWRVGGVLA+SRAFG+R LK++VVA+PE+QE+ ID  LEFLILASDGLWDVV+NE AVA +K  + PE AA++L + A+ RGS D+ITC+VV  L
Sbjct:  158 AAEHLKKHLFENLLKHPSFITDTKSAISETYRKTDSDFLDAETNINREDGSTASTAIFVGNHIYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIENAGGVVTWSGTWRVGGVLAMSRAFGNRFLKRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNEHAVAFVKAEEGPEAAARKLAEIAFARGSTDNITCIVVKFL 362          
BLAST of FC873678 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 7.383e-71
Identity = 126/201 (62.69%), Postives = 166/201 (82.59%), Query Frame = 2
Query:    5 ADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADHITCVVV 607
            A+ LK+NLF NL+ H  FISDTK AI + +  TD E+L  E  Q ++AGSTA+TA  +GD+L+VANVGDSR V  R G+A+ +S DHKPD++DERQRIEDAGGF++WAGTWRVGG+LAVSRAFGD+ LK YV+A+PEIQEE I S+LEF+++ASDGLW+V++N++AVA+++ I D E AA++L+QE Y RGS D+ITC+VV
Sbjct:  167 AEYLKNNLFKNLVSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNAGSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDI-STLEFIVVASDGLWNVLSNKDAVAIVRDISDAETAARKLVQEGYARGSCDNITCIVV 366          
The following BLAST results are available for this feature:
BLAST of FC873678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
P2C59_ARATH1.291e-9990.10Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C10_ORYSJ3.291e-9582.93Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C59_ORYSJ6.206e-9483.41Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C71_ARATH4.023e-9382.93Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C69_ARATH3.765e-9181.46Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C45_ORYSJ1.582e-8980.88Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C52_ORYSJ1.101e-7466.83Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C13_ORYSJ5.113e-7264.36Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C07_ORYSJ1.488e-7163.90Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C11_ARATH7.383e-7162.69Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873678 ID=FC873678; Name=FC873678; organism=Citrus clementina; type=EST; length=618bp
AGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCATC
CAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCAC
ACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTGG
ATCTACTGCTTCCACGGCCATCCCTGTTGGTGATCGCTTACTTGTTGCAA
ATGTGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGCC
GTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTGA
GGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGAG
TGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGTT
GTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGTT
TCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAAG
CTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAGG
CTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACCACATCACCTGTGT
CGTTGTTCCGGTCTTGGC
back to top