FC873689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: GYP7_YARLI (GTPase-activating protein GYP7 OS=Yarrowia lipolytica GN=GYP7 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.925e-16 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMWAADY 323 + GMSDLLSP V+ +D+ AFW F + RM N+ + +G+ QL L H+++ +YKHL + +L F FRMLLV F+REL +++ L +WE++W DY Sbjct: 516 VQGMSDLLSPLYVVLQDDTLAFWAFSAFMERMERNY-LRDQSGMRNQLLCLDHLVQFMLPSLYKHLEKTESTNLFFFFRMLLVWFKRELLWDDVLRLWEVLW-TDY 619
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: TBC15_MOUSE (TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMW 311 + GMSDLLSP + + E+ DAFWCF + +M NF+ E G+ QL +L +L L D +L + + L+F FR LL+ F+RE SF + L +WE+MW Sbjct: 436 VQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFE-EQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMW 536
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: TBC15_HUMAN (TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMW 311 + GMSDLLSP + + E+ DAFWCF + +M NF+ E G+ QL +L +L L D +L + + L+F FR LL+ F+RE SF + L +WE+MW Sbjct: 453 VQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFE-EQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMW 553
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: GYP7_DEBHA (GTPase-activating protein GYP7 OS=Debaryomyces hansenii GN=GYP7 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMWAADY 323 + GM+DLLSP V F+D + FW F + RM NF + +G+ Q+ L +++ +++KHL + L+F FRMLLV F+RE ++ L +WE++W Y Sbjct: 537 VQGMTDLLSPLYVTFQDESLTFWAFVNFMDRMERNF-LRDQSGMKNQMLTLNELVQFMLPDLFKHLEKCESTDLYFFFRMLLVWFKREFEWSSVLSLWEILWTDYY 641
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: GYP7_SCHPO (GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe GN=gyp7 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14 Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMW----AADYDEALASTLEEKCLEQLVVQLS 386 + GMSDLL+P V F DNA FW L++R+ NF + +G+ +QL+ L ++E D E++ HL + +L FRMLL+ F+RE + L +W++++ + DY +A + E+ E L+ Q S Sbjct: 530 VQGMSDLLAPIYVTFNDNALTFWGMVGLMKRLHFNF-LRDQSGMHRQLDTLRLLIEFMDPELFAHLEKTDSSNLFCFFRMLLIYFKREFDWEVLLKLWDVLFTNYLSYDYHIFVAYAIAERHREVLLNQTS 659
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: TBC17_MOUSE (TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.601e-13 Identity = 38/102 (37.25%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMW 311 + GMSDLLSP + + ++ DAFWCF + + NF+ E + +QL +L +L + D+ + L + + SL F FR LL+ F+RE F + L +WE++W Sbjct: 417 VQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHGNFE-ESQETMKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLW 517
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: GYP7_YEAST (GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae GN=GYP7 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMWAADY 323 + GM+DLLSP V+ ++ FWCF + M NF + +G+ +Q+ L +++L E+ +HL + +L F FRMLLV F+RE + + +WE W Y Sbjct: 530 VQGMTDLLSPIYVIMKEEWKTFWCFTHFMDIMERNF-LRDQSGIHEQMLTLVELVQLMLPELSEHLNKCDSGNLFFCFRMLLVWFKREFEMEDIMHIWENFWTFYY 634
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: TBC17_HUMAN (TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMW 311 + GMSDLLSP + + ++ DAFWCF + ++ NF+ E + +QL L +L + D + L + + SL F FR LL+ F+RE F + L +WE++W Sbjct: 417 VQGMSDLLSPILYVIQNEVDAFWCFCGFMELVQGNFE-ESQETMKRQLGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLW 517
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: GYP7_CANGA (GTPase-activating protein GYP7 OS=Candida glabrata GN=GYP7 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 3 Query: 6 IVGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGPTGVMKQLEELWHILELTDREMYKHLLNIGAESLHFAFRMLLVLFRRELSFNEALCMWEMMWAADY 323 + GM+DLLSP + D FWCF + RM NF + +G+ Q+ L + +L + HL + L F FRMLLV F+RE ++++ +WE+ + Y Sbjct: 520 VQGMTDLLSPLYYIIRDEETTFWCFTNFMERMERNF-LRDQSGIRDQMLALTDLCQLMLPRLSAHLQKCDSSDLFFCFRMLLVWFKREFNYDDIFNIWEVFFTDFY 624
BLAST of FC873689 vs. ExPASy Swiss-Prot
Match: TBC16_HUMAN (TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11 Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 3 Query: 12 GMSDLLSPFVVLFEDNADAFWCFEMLLRRMRNNFQMEGP--TGVMKQLEELWHILELTDREMYKHLLNIGAESLH--FAFRMLLVLFRRELSFNEALCMWEMMWA 314 GMSDL++P + D +D FWCF L M+N + P + KQL L +L LT Y+HL+++G + L F R LL+ F+RE EAL +WE WA Sbjct: 532 GMSDLVAPILAEVLDESDTFWCFVGL---MQNTIFVSSPRDEDMEKQLLYLRELLRLTHVRFYQHLVSLGEDGLQMLFCHRWLLLCFKREFPEAEALRIWEACWA 633 The following BLAST results are available for this feature:
BLAST of FC873689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873689 ID=FC873689; Name=FC873689; organism=Citrus clementina; type=EST; length=741bpback to top |