FC873695

Overview
NameFC873695
Unique NameFC873695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length805
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC873695 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.445e-41
Identity = 79/112 (70.54%), Postives = 96/112 (85.71%), Query Frame = 1 
Query:   13 WDDPQVIPTDMTLELSELFTRELTRYIEETEELAMNGLRDNKHILEIIAKELLENSRITGLEVEEKLQGLSPVMFEDFVKPFQINLQEEGPLPHNDRLRYKPLDIYPAPLHR 348
            WD P V+P +M++E+SELFTRELTRYIEETEELAMN LR N+HIL++I +ELLE SRITGLEVEEK++ LSP+MFEDFVKPFQIN  +E  LPH DR+ Y+P+D+  APLHR
Sbjct:  896 WDHPHVMPAEMSVEVSELFTRELTRYIEETEELAMNALRANRHILDLITRELLEKSRITGLEVEEKMKDLSPLMFEDFVKPFQINPDDEELLPHKDRVSYQPVDLRAAPLHR 1007
The following BLAST results are available for this feature:
BLAST of FC873695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FTSHC_ARATH4.445e-4170.54Cell division protease ftsH homolog 12, chloroplas... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3CE03FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CE03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873695 ID=FC873695; Name=FC873695; organism=Citrus clementina; type=EST; length=805bp
CTGTGGTGCTAGTGGGACGATCCTCAGGTCATTCCTACAGATATGACACT
TGAATTATCAGAGTTATTCACTCGAGAATTGACACGGTATATTGAGGAGA
CAGAAGAACTTGCAATGAATGGTTTAAGGGACAACAAGCATATATTGGAA
ATAATTGCGAAGGAACTCCTAGAAAACTCAAGGATAACTGGATTGGAAGT
TGAGGAGAAATTGCAGGGACTCTCTCCAGTAATGTTTGAGGACTTTGTGA
AGCCATTTCAGATTAACCTGCAAGAGGAGGGACCACTGCCCCACAACGAT
CGGTTGCGATATAAACCATTGGACATATATCCTGCACCACTTCACAGGTG
TTAAATTTTCCCAGAATTCCATTTTTTTCAGTGTTTGTCATGCAATTTGA
GATGGCTGTTTCAGTTACTGCACCTTAAAAGTTTGGGACAGATGCAGCTC
TGTCTTGAAGGCCAATACTGTTACATTGGAGATACAATATTGTAGCTATT
AGCTTCCATTAGTGGGCAAATCGTCAACATTGACAGCCCACTGCTAGTTT
GAAATTAGCAACCAAATGAATATAGAGAACGTTTAAAGGCGCTTTCAAGT
AATCTTTGTTAAAGCTCCCGAAAACTATAGGCAGGGGAACCCTCCAGGAA
GCTGGGGTTTCTGATTTGATATCAAGCTCAGAGACACTCCTCACTCTTGT
TTACGATTTAAATTTTGTTTTTGTAATTAGCCTGAAAAGAGACAAATGAC
TATACTCATAGGTTGTCGATTTGCCTACTGAGACACATCCGGTTCATGTT
GTATG
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