FC873697

Overview
NameFC873697
Unique NameFC873697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.136e-77
Identity = 151/228 (66.23%), Postives = 167/228 (73.25%), Query Frame = 2
Query:  146 EALNPLFSSVSSAFPPKPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            E L+P+ S+ S  F  K    FS+   +  +VVCASK +N  PLTGV+F PFEEVKKEL LVPTVPQ+SLARHK++D CEAA+NEQINVEYNVSYVYH M+AYFDRDNVALKGL                KLMEYQNKRGGKVKLQSILMPLSEFDHAE+GDALYAME                H VA +NNDVQLADFVESKYL EQVEAIK ISEYVA LRRV +G
Sbjct:   17 ENLSPMLSTSSQGFVLK---NFSTKSRNGLLVVCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKG 241          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.250e-75
Identity = 151/224 (67.41%), Postives = 165/224 (73.66%), Query Frame = 2
Query:  158 PLFSSVSSAFPPKPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            PL +S SS       +R+S     N +V CA+K+ NN PLTGV+F PFEEVKKELDLVPTVPQ SLAR K+TDDCEA INEQINVEYNVSYVYHAMFAYFDRDNVALKGL                KLMEYQNKRGGKVKLQSI+MPLSEFDH EKGDALYAME                H VA+KNNDVQLADF+ES++L EQVEAIKKISEYVA LRRV +G
Sbjct:   21 PLPNSSSSGI-----IRYSQSLGKN-LVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKG 238          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.664e-68
Identity = 141/230 (61.30%), Postives = 158/230 (68.70%), Query Frame = 2
Query:  140 QKEALNPLFSSVSSAFPPKPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            Q E L+PLFSS  S           SPKN N  VV ASK  N+ PLTGV+F PFEE+KKEL LVP VP  SL R K++DDCEAAINEQINVEYN SYVYHAMFAYFDRDNVALKGL                KLME+QNKRGG+VKL SI  P +EFDH EKGDALYAME                H VA+++NDV LADF+ES++L EQV+AIKKISEYVA LRRV +G
Sbjct:   15 QGENLSPLFSSSKSF----------SPKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQG 234          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 5.935e-68
Identity = 141/222 (63.51%), Postives = 159/222 (71.62%), Query Frame = 2
Query:  167 SSVSSAFPPKPSLRFSSPKNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            +S  S F P      S P    G+VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ E+A+NEQINVEYNVSYVYHAMFAYFDRDNVAL+GL                KLMEYQNKRGGKVKLQSI+MPLS+FDHA+KGDAL+AME                H VA KN DVQLADFVE++YL EQVEAIK+ISEYVA LRRV +G
Sbjct:   10 ASSLSLFSPNAEPPRSVPAR--GLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKG 229          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.255e-67
Identity = 138/230 (60.00%), Postives = 163/230 (70.87%), Query Frame = 2
Query:  143 KEALNPLFSSVSSAFPPKPSLRFSSPKNDNGVVVC-ASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            K+ ++PL  S+SS      +LR SS K+ N      ASK++    L+GV+F PF+EVKKELDLVPT   LSLAR K++D+CEAAINEQINVEYNVSYVYHAM+AYFDRDN+ALKGL                KLMEYQNKRGG+VKLQSI+MPLSEF+H +KGDALY ME                H VA+KNNDV LADF+ES++L EQVEAIK ISEYVA LRRV +G
Sbjct:   23 KKDVSPLLPSISS------NLRVSSGKSGNLTFSFRASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKG 246          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 3.847e-67
Identity = 140/225 (62.22%), Postives = 160/225 (71.11%), Query Frame = 2
Query:  167 SSVSSAFPPKPSLRFSSP---KNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            +S  S F P      S P    N + +VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ EAA+NEQINVEYNVSYVYHA+FAYFDRDNVAL+GL                KLMEYQN+RGGKVKLQSI+MPLSEFDHA+KGDAL+AME                H VA KN DVQLADFVES++L EQVE+IK+ISEYVA LRRV +G
Sbjct:    8 ASSLSLFNPNAEPSRSVPVLANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKG 232          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.022e-65
Identity = 135/233 (57.94%), Postives = 165/233 (70.82%), Query Frame = 2
Query:  140 QKEALNPLFSSVSSAFPPKPSLRFSSPKNDN-GVVVCASKNANN--SPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            +K+ ++PLFSS SS   P      SS K+ N    + ASK++    S L+GV+F PFEEVKKE+DLVP+  QLSLARH ++ +CEAA+NEQINVEYNVSYVYHA++AYFDRDNVALKGL                 LMEYQNKRGG+VKLQ +++P SEFDH EKGDALYAME                H VA+KN+DVQLADF+ES +L+EQVEAIKKISEYV+ LRR+ +G
Sbjct:   17 EKKDISPLFSSSSSISSP-----VSSGKSGNLSFPLRASKSSTTTTSTLSGVVFEPFEEVKKEMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKG 244          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.869e-64
Identity = 132/234 (56.41%), Postives = 156/234 (66.67%), Query Frame = 2
Query:  137 PQKEALNPLFSSVSSAFPPK---PSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            P    L+  ++   + FPP     +L FS   + +   V A+K  N   LTGV+F PFEEVKKE++LVPT P +SLARHKF+DD E+AIN+QINVEYNVSYVYHA++AYFDRDNV LKG                   MEYQNKRGG+VKLQSILMP+SEFDH EKGDAL+AME                  V  KNNDVQL DFVES++L EQVEAIKKISEYVA LRR+ +G
Sbjct:    7 PALSLLSSGYTGGGNLFPPSRNSSNLLFSP--SGSRFSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKG 238          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 5.949e-60
Identity = 119/216 (55.09%), Postives = 142/216 (65.74%), Query Frame = 2
Query:  191 PKPSLRFSSPK---NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            P P +R ++P+   + +    C +       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAA+NEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + ND QL DF+ES++L EQ EAI KIS+YVA LRRV +G
Sbjct:   24 PAPVVRVAAPRGVASPSAGAACRAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDKSLARHKFVDDCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKG 239          
BLAST of FC873697 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.578e-59
Identity = 120/219 (54.79%), Postives = 145/219 (66.21%), Query Frame = 2
Query:  176 SSAFPPKPSLRFSSPKNDNGVVVCASK-NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAHLRRVARG 829
            SSA P   SL FS      GVV  +S  + NN P+TGV+F PFEEVKK    +P     SLAR ++ D  EAAINEQINVEYNVSYVYH+M+AYFDRDNVALKGL                K MEYQN+RGG+V L  I+ P+S+F+HAEKGDALYAME                H+VA++NND QLADFVES++L EQ+EAIKKIS+++  LR V +G
Sbjct:   24 SSASPSVMSLSFSRHTGGRGVVAASSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKG 242          
The following BLAST results are available for this feature:
BLAST of FC873697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI2_TOBAC9.136e-7766.23Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI3_SOYBN2.250e-7567.41Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_TOBAC2.664e-6861.30Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI4_SOYBN5.935e-6863.51Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI4_ARATH2.255e-6760.00Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_VIGUN3.847e-6762.22Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI3_ARATH8.022e-6557.94Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_ARATH8.869e-6456.41Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_MAIZE5.949e-6055.09Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI1_BRANA6.578e-5954.79Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CE05FM1 AbsDev Citrus clementina cDNA clone KN0AAI3CE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873697 ID=FC873697; Name=FC873697; organism=Citrus clementina; type=EST; length=835bp
CAGCCTCACAGCCTCCGTTGCGTTTCACTTCATTTGCTCCTCTTTTCAAA
TCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGCAAACAAAAAATG
TTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCCCCAAAAGGAGGC
TCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTCCGCCGAAACCGA
GTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTGGTGGTCTGCGCC
TCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCATTTTTGCTCCCTT
TGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTGTGCCTCAACTGT
CTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCCGCAATCAACGAG
CAGATCAATGTGGAATACAATGTCTCCTATGTGTATCATGCCATGTTTGC
TTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCGCCAAGTTTTTCA
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGATATCTGAGTATG
TTGCTCACCTGAGAAGAGTGGCCAGGGGCATGGTG
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