FC873855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: CHRD1_PONAB (Cysteine and histidine-rich domain-containing protein 1 OS=Pongo abelii GN=CHORDC1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 283 +C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG H++ Sbjct: 4 LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNS 66
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: CHRD1_HUMAN (Cysteine and histidine-rich domain-containing protein 1 OS=Homo sapiens GN=CHORDC1 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 283 +C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG H++ Sbjct: 4 LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNS 66
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: CHRD1_CHICK (Cysteine and histidine-rich domain-containing protein 1 OS=Gallus gallus GN=CHORDC1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 283 +C N+GCG+ F + N E +C+YHPG VFHD ++GW CC +F +F+ I CTKG H++ Sbjct: 4 LCYNRGCGQRFDPETNTEDSCTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGLHNS 66
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: CHRD1_BOVIN (Cysteine and histidine-rich domain-containing protein 1 OS=Bos taurus GN=CHORDC1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 283 +C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG H++ Sbjct: 4 LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNS 66
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: CHRD1_MOUSE (Cysteine and histidine-rich domain-containing protein 1 OS=Mus musculus GN=Chordc1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.265e-14 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 283 +C N+GCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG H++ Sbjct: 4 LCYNRGCGQRFDPEANSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNS 66
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: CHRD1_DANRE (Cysteine and histidine-rich domain-containing protein 1 OS=Danio rerio GN=chordc1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.265e-14 Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHD 280 +C NKGCG+ F + N + AC+YHPG VFHD ++GW CC +F +F+ I CTKG H+ Sbjct: 4 MCYNKGCGQRFDLEKNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGPHN 65
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: CHRD1_XENLA (Cysteine and histidine-rich domain-containing protein 1 OS=Xenopus laevis GN=chordc1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.807e-14 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHD 280 +C N+GCG+ + + N + +C+YHPG VFHD ++GW CC +F +F+ I CTKG H+ Sbjct: 4 LCYNRGCGQRYDPEGNSDDSCTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGQHN 65 HSP 2 Score: 67.0106 bits (162), Expect = 4.974e-11 Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 2 Query: 98 CKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWH 277 CKN GC KTF ++E C YH G +FH+ M+ W CC +F+ F+ + CTKG H Sbjct: 156 CKNGGCLKTFAGPQSNEEVCHYHSGVPIFHEGMKYWSCCRRKTSDFNTFLSLEGCTKGTH 215
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: ITBP2_MOUSE (Integrin beta-1-binding protein 2 OS=Mus musculus GN=Itgb1bp2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.314e-13 Identity = 29/63 (46.03%), Postives = 37/63 (58.73%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 283 +C NKGCG+ F N +C YHPG +FHD ++GW CC +F EF+ I CT G H A Sbjct: 4 LCYNKGCGQHFDPNTNLPDSCRYHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTVGLHCA 66
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: ITBP2_HUMAN (Integrin beta-1-binding protein 2 OS=Homo sapiens GN=ITGB1BP2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 283 +C+NKGCG+ F N +C +HPG +FHD ++GW CC +F EF+ I CT G H A Sbjct: 4 LCRNKGCGQHFDPNTNLPDSCCHHPGVPIFHDALKGWSCCRKRTVDFSEFLNIKGCTMGPHCA 66
BLAST of FC873855 vs. ExPASy Swiss-Prot
Match: ITBP2_PIG (Integrin beta-1-binding protein 2 OS=Sus scrofa GN=ITGB1BP2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.546e-12 Identity = 29/63 (46.03%), Postives = 38/63 (60.32%), Query Frame = 2 Query: 95 ICKNKGCGKTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 283 +C NKGCG+ F + N +C +HPG VFHD ++GW CC +F EF+ I CT G H A Sbjct: 4 LCHNKGCGQHFDPQTNLPDSCCHHPGVPVFHDALKGWSCCRKRTVDFSEFLNIKGCTVGPHCA 66 The following BLAST results are available for this feature:
BLAST of FC873855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873855 ID=FC873855; Name=FC873855; organism=Citrus clementina; type=EST; length=485bpback to top |