FC875304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP_CUCSA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 6.479e-81 Identity = 156/198 (78.79%), Postives = 171/198 (86.36%), Query Frame = 3 Query: 57 TTPARTSSSQRHVSNIK-PTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTR 632 T AR+SSS R + K P +VCRAQKQ QE++G VSRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK+NTD+LPY+GDGFKLSIPSKWNPSKEREFPGQVLRYEDNFD NSN+SVII PTDKKSI D+GSPEEFLSKVDYLLGKQAY GKT+SEGGFDPDAVATANILEA+ YYF+SVLTR Sbjct: 14 TAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALTVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNLSVIINPTDKKSIKDFGSPEEFLSKVDYLLGKQAYFGKTASEGGFDPDAVATANILEATASNVNGKDYYFVSVLTR 211
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP1_ARATH (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2) HSP 1 Score: 296.59 bits (758), Expect = 7.163e-80 Identity = 147/191 (76.96%), Postives = 171/191 (89.53%), Query Frame = 3 Query: 72 TSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTR 632 +SSSQRHVS KP QI+C+AQ+ EDD SAVSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDFLPYNGDGFK+ +P+KWNPSKE E+PGQVLR+EDNFD SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+SEGGFD +AVATANILE+S + PYY+LSVLTR Sbjct: 23 SSSSQRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTR 211
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2) HSP 1 Score: 288.886 bits (738), Expect = 1.494e-77 Identity = 151/203 (74.38%), Postives = 172/203 (84.73%), Query Frame = 3 Query: 54 STTPARTSSS---QRHVSNIKPTQIVCRAQKQAV-QEDDGSAV--SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTR 632 S++ ART+SS QR+VS++KP Q+VCRAQKQ+ QEDDG++V SRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK NTDFL YNGDGFKL +P+KWNPSKE EFPGQVLRYEDNFD SN+ V +TPTDKKSITDYGSPEEFL++VD+LLGKQAY GKT SEGGF+ AVATAN+LE S YY LSVLTR Sbjct: 14 SSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSKEVEFPGQVLRYEDNFDSTSNLIVTVTPTDKKSITDYGSPEEFLTQVDFLLGKQAYFGKTDSEGGFESGAVATANLLETSSSTVGGKEYYILSVLTR 216
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 5.676e-77 Identity = 147/196 (75.00%), Postives = 163/196 (83.16%), Query Frame = 3 Query: 57 TTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTR 632 ++PARTSS V + KP Q++CRAQKQ + +AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL IP+KWNPSKE EFPGQVLRYEDNFD SN+ V +TPTDKKSITDYGSPEEFLSKVDYLLGKQAY GKT SEGGF+ AVATAN+LEAS YY+LSVLTR Sbjct: 17 SSPARTSS----VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSNLMVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSEGGFESGAVATANLLEASSATVGGKQYYYLSVLTR 208
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.398e-75 Identity = 148/198 (74.75%), Postives = 164/198 (82.83%), Query Frame = 3 Query: 57 TTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS--AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTR 632 ++PARTSS VS+ KP Q++CRAQKQ DD S AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL +P+KWNPSKE E+PGQVLRYEDNFD SN+ V +TPTDKKSITDYGSPEEFLSKVDYLLGKQAY GKT SEGGF+ AVAT N+LEAS YY+LSVLTR Sbjct: 17 SSPARTSS----VSSPKPNQLICRAQKQ----DDASNAAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSNLIVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSEGGFESGAVATRNLLEASSATVGGKEYYYLSVLTR 206
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP_FRIAG (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis GN=PSBP PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.398e-75 Identity = 144/199 (72.36%), Postives = 165/199 (82.91%), Query Frame = 3 Query: 57 TTPARTSSSQRH--VSNIKPTQIVCRAQKQA-VQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTR 632 +TPA TS + H V IKP+Q++CRAQK + E+ +AVSRRLALT+LIG+AAVG+K++PA+AAYGE+ANVFGK KTNTDFLPY GDGF L IP+KWNPSKE EFPGQVLRYEDNFD SNVSV +TPT KKSITDYG+PEEFLS VDYLLGKQAYSGKT+SEGGFDPD+VATANILE S YY +SVLTR Sbjct: 14 STPATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLALTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNVSVTVTPTSKKSITDYGTPEEFLSTVDYLLGKQAYSGKTASEGGFDPDSVATANILEVSTPVVGGKQYYNISVLTR 212
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP2_TOBAC (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum GN=PSBP2 PE=1 SV=2) HSP 1 Score: 280.026 bits (715), Expect = 6.938e-75 Identity = 145/200 (72.50%), Postives = 166/200 (83.00%), Query Frame = 3 Query: 57 TTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTR 632 +TPART + V ++KP Q+ VCRAQKQ+ ++D +VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE E+PGQVLR+EDNFD SNV V ITPTDKKSITD+GSPE+FLS+VDYLLG+QAYSGKT SEGGF+ DAVA AN+LE S PYY+LSVLTR Sbjct: 14 STPARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSSAEVGGKPYYYLSVLTR 213
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.019e-74 Identity = 147/196 (75.00%), Postives = 161/196 (82.14%), Query Frame = 3 Query: 57 TTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTR 632 TTP RT S QR V KP IVC+AQKQ D + VSRRLAL+VLIGAAAVGSKVSPADAAYGE+ANVFGK KTNTD+LPYNGDGFKL +P+KWNPSKEREFPGQVLRYEDNFD SNVSV++ TDKKSITDYGSPEEFLSKVDYLLGKQA+ G+T SEGGFD +AVA ANILE+S YY +SVLTR Sbjct: 15 TTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSVLIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPGQVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFDTNAVAVANILESSAPVIGGKQYYNISVLTR 207
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP_SPIOL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.002e-73 Identity = 142/200 (71.00%), Postives = 165/200 (82.50%), Query Frame = 3 Query: 54 STTPARTSSSQRHVS-NIKPTQIVCRAQKQAVQEDD--GSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTR 632 S R S++QR+ + +IKP QIVC+AQKQ E + S VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPK NT+F+PYNGDGFKL +PSKWNPSKE+EFPGQVLRYEDNFD SN+SV++ PTDKKSITD+GSPE+FLS+VDYLLGKQAY GKT SEGGFD VA+AN+LE+S YY ++VLTR Sbjct: 16 SPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSEGGFDSGVVASANVLESSTPVVDGKQYYSITVLTR 215
BLAST of FC875304 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2) HSP 1 Score: 270.781 bits (691), Expect = 4.209e-72 Identity = 136/191 (71.20%), Postives = 165/191 (86.39%), Query Frame = 3 Query: 72 TSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTR 632 +SSSQR+VS K +VC+AQ+ E+D S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF Y+GDGF++ +P+KWNPS+E E+PGQVLRYEDNFD SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+SEGGFD +AVATANILE +++ PYY+LSVLTR Sbjct: 23 SSSSQRYVSISK---LVCKAQQ--THEEDNSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTR 208 The following BLAST results are available for this feature:
BLAST of FC875304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875304 ID=FC875304; Name=FC875304; organism=Citrus clementina; type=EST; length=639bpback to top |