FC875317

Overview
NameFC875317
Unique NameFC875317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9909 contig Ccv1_Contig9909:8..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.807e-110
Identity = 191/202 (94.55%), Postives = 195/202 (96.53%), Query Frame = 3 
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA +DYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GARLTEVRKN TC WLRPDGKTQVTVEYYND GAMVPVRVHTVLISTQHDETVT
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATIDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 202
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.807e-110
Identity = 190/202 (94.06%), Postives = 196/202 (97.03%), Query Frame = 3 
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTK K+DYEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E+MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYND GAMVPVRVHTVLISTQHDETVT
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKGKIDYEKIVRDTCRNIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 202
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.789e-110
Identity = 191/202 (94.55%), Postives = 195/202 (96.53%), Query Frame = 3 
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA+LTEVRKN TC WLRPDGKTQVTVEYYND GAMVPVRVHTVLISTQHDETVT
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 202
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.789e-110
Identity = 191/202 (94.55%), Postives = 195/202 (96.53%), Query Frame = 3 
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA+LTEVRKN TC WLRPDGKTQVTVEYYND GAMVPVRVHTVLISTQHDETVT
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 202
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.789e-110
Identity = 191/202 (94.55%), Postives = 195/202 (96.53%), Query Frame = 3 
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDET E MPLSHVLATK+GA+LTEVRKN TC WLRPDGKTQVTVEYYND GAMVPVRVHTVLISTQHDETVT
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 202
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.067e-109
Identity = 191/201 (95.02%), Postives = 194/201 (96.52%), Query Frame = 3 
Query:   99 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEDIGAGDQGHMFGYATDET EFMPLSHVLATKLGA LTEVRKN TC WLRPDGKTQVTVEYYND GAMVP+RVHTVLISTQHDETVT
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGASLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVT 204
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.067e-109
Identity = 191/202 (94.55%), Postives = 196/202 (97.03%), Query Frame = 3 
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+ GAMVPVRVHTV+ISTQHDETVT
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVT 202
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.104e-109
Identity = 190/202 (94.06%), Postives = 195/202 (96.53%), Query Frame = 3 
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETCTKTNMVMVFGEITTKA+VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYND GAMVP+RVHTVLISTQHDETVT
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVT 202
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 4.054e-109
Identity = 191/202 (94.55%), Postives = 194/202 (96.04%), Query Frame = 3 
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGFVSDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+ GA VPVRVHTVLISTQHDETVT
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRSIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVT 202
[Close]
BLAST of FC875317 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 4.054e-109
Identity = 188/203 (92.61%), Postives = 197/203 (97.04%), Query Frame = 3 
Query:   93 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDXGAMVPVRVHTVLISTQHDETVT 701
            ++ETFLFTSESVNEGHPDKLCDQISDAVLDACL +DP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFVS+DVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGARLTEVRKN+TC WLRPDGKTQVTVEY+ND GAMVP+RVHTVLISTQHDETVT
Sbjct:    3 EVETFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNATCPWLRPDGKTQVTVEYHNDNGAMVPIRVHTVLISTQHDETVT 205
The following BLAST results are available for this feature:
BLAST of FC875317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ARATH2.807e-11094.55S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK1_POPTR2.807e-11094.06S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK_BRARP4.789e-11094.55S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU4.789e-11094.55S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK1_BRAJU4.789e-11094.55S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK2_PEA1.067e-10995.02S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK1_CATRO1.067e-10994.55S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK2_CATRO3.104e-10994.06S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK_CARPA4.054e-10994.55S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK4_HORVU4.054e-10992.61S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionC31402F03EF CTVClemen1 Citrus clementina cDNA clone C31402F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875317 ID=FC875317; Name=FC875317; organism=Citrus clementina; type=EST; length=718bp
CAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGA
ATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGA
GACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGT
TGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGAT
CCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCAT
GGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTG
TTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTT
GACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGA
TATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTG
GTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCT
GAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCT
CACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGA
AGACCCAGGTCACTGTTGAGTACTACAACGACNATGGTGCCATGGTCCCA
GTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTGTCAC
AATGATGAATTGCTGCTG
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