FC875329

Overview
NameFC875329
Unique NameFC875329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length614
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig886 contig Ccv1_Contig886:7..620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875329 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.824e-21
Identity = 65/173 (37.57%), Postives = 95/173 (54.91%), Query Frame = 1
Query:  118 SEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG--TNGQCPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIG-VSTXDGVRRL 612
            + PVLD  G+++++ ++Y ++  + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  S  DG  RL
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRL 195          
BLAST of FC875329 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 2.382e-21
Identity = 67/185 (36.22%), Postives = 98/185 (52.97%), Query Frame = 1
Query:   94 PLLGISSNS-EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLGT--NGQ--CPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTXDGVRR 609
            PLL  + ++  PVLDI G K+++   Y ++PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+      RR
Sbjct:   24 PLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRR 201          
BLAST of FC875329 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  121 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHL---GTNGQCPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL---IVTGGSEGHPGAETLLNWFKIEKAG-NFSYGGVYNIVHCPSVCLSCPRRCNKIGV 585
            +P++DI G  V   ++Y ++  + GAGG    +   G   +CPL V+Q   P + G+ +      N K  IV  S D+N++F + ++   CNE   WKVD +   +   +  GG +G+ G E+  + FKI+KAG  FS    Y    CPS   +    CN + +
Sbjct:    4 KPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ--DPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN---CNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS----YKFHFCPSYPRTRLIPCNNVDI 158          
BLAST of FC875329 vs. ExPASy Swiss-Prot
Match: SPI7_SOLTU (Serine protease inhibitor 7 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 7.681e-12
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = 1
Query:  100 LGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNKIGVSTXDGVRRL 612
            + + S++ PVLD+ G ++ S L Y++I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD      L+ TGG+ G   +    +WFKI K+  F     YN+++CP +  +SCP     + C K+GV   +G RRL
Sbjct:   27 INLPSDATPVLDVAGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQFG----YNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRL 205          
BLAST of FC875329 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 52/180 (28.89%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  106 ISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTXDGVRRL 612
            + S++ PVLD+ G ++ S L Y++I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD      L+ TGG+ G   +    +WFKI K+        YN+++CP    S  + C+K+GV   +G RRL
Sbjct:    1 LPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG----YNLLYCPVTSSSDDQFCSKVGVVHQNGKRRL 171          
BLAST of FC875329 vs. ExPASy Swiss-Prot
Match: SPI1_SOLTU (Serine protease inhibitor 1 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.919e-11
Identity = 55/188 (29.26%), Postives = 94/188 (50.00%), Query Frame = 1
Query:  100 LGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNKIGVSTXDGVRRL 612
            + + S++ PVLD+ G ++ S L Y++I    GA G   +LG    ++  C   V + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD      L+ TGG+ G   +    +WFKI K+        YN+++CP +  +SCP     + C K+GV   +G RRL
Sbjct:   27 INLPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG----YNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRL 205          
BLAST of FC875329 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 52/163 (31.90%), Postives = 77/163 (47.24%), Query Frame = 1
Query:  112 SNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG-TNGQ-CPLDVIQLSSPSERGDNLRLL-PYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWK-VDSYDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVS 588
            S++E V DI G  V    EY ++  + GAGG     G T G  CP+ +IQ  S  + G  +R   P ++   +   T++ + F   V    C E   W  V    +  +  GGSE HP  E +  +FKIEK G+ +    Y +V CP    S    C+ IG++
Sbjct:    1 SDAEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEF---VEKPDCAESSKWVIVKDSGEARVAIGGSEDHPQGELVRGFFKIEKLGSLA----YKLVFCPK---SSSGSCSDIGIN 153          
The following BLAST results are available for this feature:
BLAST of FC875329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ASP_THECC1.824e-2137.5721 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.382e-2136.22Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA2.640e-1231.71Latex serine proteinase inhibitor OS=Carica papaya... [more]
SPI7_SOLTU7.681e-1229.26Serine protease inhibitor 7 OS=Solanum tuberosum P... [more]
SPI2_SOLTU1.003e-1128.89Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
SPI1_SOLTU2.919e-1129.26Serine protease inhibitor 1 OS=Solanum tuberosum P... [more]
DRTI_DELRE6.503e-1131.90Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionC31402G03EF CTVClemen1 Citrus clementina cDNA clone C31402G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875329 ID=FC875329; Name=FC875329; organism=Citrus clementina; type=EST; length=614bp
GACACAAACAGCAGCCAGCCTTCCAGTGGCAAAAAAATGAAGACTTCATT
GATAACAACACTCTCCTTCCTTATCCTTACCTTGGCCACGCAGCCTCTAT
TGGGCATCTCATCAAACTCTGAACCTGTCTTAGATATCATTGGCAACAAG
GTCAAATCCACCCTCGAGTATAAACTTATCCCAGTCCTAGATGGCGCCGG
TGGATTCAGCACACACCTAGGCACAAATGGACAGTGTCCCTTGGACGTTA
TCCAATTAAGTTCTCCTAGCGAAAGGGGAGATAATTTAAGATTACTTCCG
TACGACAATTACAAAATTGTCAAGGTATCCACTGATGTCAACCTGAGATT
CCCCGTAAAAGTTTCTGTTAAGCCCTGTAATGAAGAACCATTGTGGAAAG
TTGATAGCTATGACGATCCATTAATTGTAACCGGCGGAAGTGAGGGCCAC
CCAGGAGCTGAAACGTTGCTAAATTGGTTTAAGATTGAGAAAGCTGGAAA
TTTTTCATATGGTGGTGTATACAATATTGTCCATTGTCCGAGTGTCTGTC
TATCTTGTCCTAGACGCTGCAACAAAATTGGCGTTTCAACTAANGATGGC
GTTCGACGTCTGCT
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