FC875349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2E_ARATH (Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49 Identity = 105/178 (58.99%), Postives = 121/178 (67.98%), Query Frame = 1 Query: 208 MYRERGTGG-------SKSEVVVGPVDRKRINDALDKQLERSSPSTSRTTINGKDMSVLLGKHPADHQRDSRSASLSKNHAXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 MY++R GG S+SE++ G +DRKRINDALDK L++SSPSTSR KD + A Q SRS + + WISWFCNLRGNEFFCEVD+DYIQDDFNLCGLSGQVPYYDYALDLILDVESS+G+MFTEEQ+E+VESAAEMLYGLI Sbjct: 1 MYKDRSGGGIMGGGGSSRSEILGGAIDRKRINDALDKHLKKSSPSTSRV-FTSKDKDSVPSTSTAKSQLHSRSPDVESD-------TDSEGSDVSGSEGDDTSWISWFCNLRGNEFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVESSNGDMFTEEQHEMVESAAEMLYGLI 170
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2B_ARATH (Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49 Identity = 114/184 (61.96%), Postives = 125/184 (67.93%), Query Frame = 1 Query: 208 MYRERGTGGSKSEVVVGPVDRKRINDALDKQLERSSPSTSRTTINGKDMSV---------LLGKHPADH--QRDSRSASLSKNH--AXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 MYR+RGT S+ EVV DRKRINDAL ER SPSTSR +NGK L+GK +++ RDSRSASLSKN+ + WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLS VPYY+YALDLILDVESS GEMFTEEQNEL+ESAAEMLYGLI Sbjct: 1 MYRDRGTVNSRPEVV----DRKRINDAL----ERPSPSTSRQ-VNGKGKGTVTAATTTANLIGKQQSNNINHRDSRSASLSKNNTVSDDESDTDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSLVPYYEYALDLILDVESSQGEMFTEEQNELIESAAEMLYGLI 175
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2C_ARATH (Casein kinase II subunit beta' OS=Arabidopsis thaliana GN=CKB2 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49 Identity = 111/178 (62.36%), Postives = 120/178 (67.42%), Query Frame = 1 Query: 208 MYRERGTGGSKSEVVVGPVDRKRINDALDKQLERSSPSTSRTTINGK----DMSVLLGKHPADHQRDSRSASLSKNH---AXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 MYRERG GSKSEVV DRKRIN+ D R S S S+ +NGK SVL+GK + SRS S+SK + A WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLS QVPYYDYALDLILDVESSHGEMFTEEQNEL+ESAAEMLYG+I Sbjct: 1 MYRERGMVGSKSEVV----DRKRINEIHDN---RPSHSMSQP-VNGKGKVTSTSVLMGKQQLHDKESSRSGSISKTNISDAVDISDTDSEESEVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSHQVPYYDYALDLILDVESSHGEMFTEEQNELIESAAEMLYGMI 170
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2D_ARATH (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana GN=CKB3 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.366e-45 Identity = 98/182 (53.85%), Postives = 123/182 (67.58%), Query Frame = 1 Query: 208 MYRERGTGG----SKSEVVVGPVDRKRINDALDKQLERSSPSTSRTTI-NGKDM------SVLLGKHPADHQRDSRSASLSKNHAXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 MY+ER GG S+SE++ G +DRKRINDAL+K+LE+SS ST+ + + + KD S + + DS + +S + WISWFCNLRGN+FFCEVD+DYIQDDFNLCGLSGQVPYYDYALDLILDV++S+ EMFT+EQ+E+VESAAEMLYGLI Sbjct: 1 MYKERSGGGGGGSSRSEILGGAIDRKRINDALNKKLEKSSTSTTTSRVFSSKDKDPFSFTSTKTQLPDVESETDSEGSDVSGSEGDDTS------------------WISWFCNLRGNDFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVDASNSEMFTDEQHEMVESAAEMLYGLI 164
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2B_XENLA (Casein kinase II subunit beta OS=Xenopus laevis GN=csnk2b PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 496 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLI Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLI 83
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2B_RAT (Casein kinase II subunit beta OS=Rattus norvegicus GN=Csnk2b PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 496 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLI Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLI 83
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2B_RABIT (Casein kinase II subunit beta OS=Oryctolagus cuniculus GN=CSNK2B PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 496 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLI Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLI 83
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2B_PIG (Casein kinase II subunit beta OS=Sus scrofa GN=CSNK2B PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 496 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLI Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLI 83
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2B_MOUSE (Casein kinase II subunit beta OS=Mus musculus GN=Csnk2b PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 496 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLI Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLI 83
BLAST of FC875349 vs. ExPASy Swiss-Prot
Match: CSK2B_HUMAN (Casein kinase II subunit beta OS=Homo sapiens GN=CSNK2B PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23 Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 496 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHGEMFTEEQNELVESAAEMLYGLI 720 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Q++L+E AAEMLYGLI Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLI 83 The following BLAST results are available for this feature:
BLAST of FC875349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875349 ID=FC875349; Name=FC875349; organism=Citrus clementina; type=EST; length=739bpback to top |